RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 DUOX1Q9NRD9 1551 aa0.53□□□□□ -2.33
MRPL48-212ENST00000543374 LRP1Q07954 4544 aaKnown RBP0.52□□□□□ -2.33
MRPL48-212ENST00000543374 ACANP16112 2415 aa0.52□□□□□ -2.33
MRPL48-212ENST00000543374 IGSF10Q6WRI0 2623 aa0.52□□□□□ -2.33
MRPL48-212ENST00000543374 UBR5O95071 2799 aaPredicted RBP0.51□□□□□ -2.33
MRPL48-212ENST00000543374 NF1P21359 2839 aa0.51□□□□□ -2.33
MRPL48-212ENST00000543374 M0QZ58 72 aa0.51□□□□□ -2.33
MRPL48-212ENST00000543374 FLNBO75369 2602 aaKnown RBP0.51□□□□□ -2.33
MRPL48-212ENST00000543374 SPRR2BP35325 72 aa0.51□□□□□ -2.33
MRPL48-212ENST00000543374 WNK1Q9H4A3 2382 aa0.5□□□□□ -2.33
MRPL48-212ENST00000543374 MYCBP2O75592 4640 aa0.5□□□□□ -2.33
MRPL48-212ENST00000543374 SRRM2Q9UQ35 2752 aaKnown RBP0.5□□□□□ -2.33
MRPL48-212ENST00000543374 LPAP08519 4548 aa0.5□□□□□ -2.33
MRPL48-212ENST00000543374 CELSR1Q9NYQ6 3014 aa0.5□□□□□ -2.33
MRPL48-212ENST00000543374 MROH2BQ7Z745 1585 aa0.49□□□□□ -2.33
MRPL48-212ENST00000543374 APC2O95996 2303 aa0.49□□□□□ -2.33
MRPL48-212ENST00000543374 H3BNG1 76 aa0.49□□□□□ -2.33
MRPL48-212ENST00000543374 NBASA2RRP1 2371 aa0.49□□□□□ -2.33
MRPL48-212ENST00000543374 FLNCQ14315 2725 aa0.49□□□□□ -2.33
MRPL48-212ENST00000543374 NSD1Q96L73 2696 aaPredicted RBP0.49□□□□□ -2.33
MRPL48-212ENST00000543374 SETD2Q9BYW2 2564 aaPredicted RBP0.48□□□□□ -2.33
MRPL48-212ENST00000543374 LYSTQ99698 3801 aa0.47□□□□□ -2.33
MRPL48-212ENST00000543374 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
MRPL48-212ENST00000543374 TNP1P09430 55 aa0.47□□□□□ -2.33
MRPL48-212ENST00000543374 HRNRQ86YZ3 2850 aaPredicted RBP0.47□□□□□ -2.33
MRPL48-212ENST00000543374 VPS13BQ7Z7G8 4022 aa0.45□□□□□ -2.34
MRPL48-212ENST00000543374 GCN1Q92616 2671 aaKnown RBP0.45□□□□□ -2.34
MRPL48-212ENST00000543374 POLR2KP53803 58 aaKnown RBP0.45□□□□□ -2.34
MRPL48-212ENST00000543374 GCC2Q8IWJ2 1684 aa0.45□□□□□ -2.34
MRPL48-212ENST00000543374 ZZEF1O43149 2961 aa0.45□□□□□ -2.34
MRPL48-212ENST00000543374 PDZD2O15018 2839 aa0.44□□□□□ -2.34
MRPL48-212ENST00000543374 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
MRPL48-212ENST00000543374 ANKRD11Q6UB99 2663 aaPredicted RBP0.44□□□□□ -2.34
MRPL48-212ENST00000543374 PKD1P98161 4303 aa0.44□□□□□ -2.34
MRPL48-212ENST00000543374 MTORP42345 2549 aa0.43□□□□□ -2.34
MRPL48-212ENST00000543374 DCHS2Q6V1P9 2916 aa0.43□□□□□ -2.34
MRPL48-212ENST00000543374 SPTBN4Q9H254 2564 aa0.43□□□□□ -2.34
MRPL48-212ENST00000543374 CLPSL2Q6UWE3 100 aa0.43□□□□□ -2.34
MRPL48-212ENST00000543374 FLNAP21333 2647 aaKnown RBP0.42□□□□□ -2.34
MRPL48-212ENST00000543374 SPRR2AP35326 72 aa0.42□□□□□ -2.34
MRPL48-212ENST00000543374 ACACAQ13085 2346 aa0.41□□□□□ -2.34
MRPL48-212ENST00000543374 EPG5Q9HCE0 2579 aa0.41□□□□□ -2.34
MRPL48-212ENST00000543374 TACC2O95359 2948 aa0.41□□□□□ -2.34
MRPL48-212ENST00000543374 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
MRPL48-212ENST00000543374 UTP20O75691 2785 aaKnown RBP0.41□□□□□ -2.34
MRPL48-212ENST00000543374 MAST4O15021 2626 aa0.41□□□□□ -2.34
MRPL48-212ENST00000543374 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
MRPL48-212ENST00000543374 SACSQ9NZJ4 4579 aa0.4□□□□□ -2.34
MRPL48-212ENST00000543374 FAT4Q6V0I7 4981 aa0.39□□□□□ -2.35
MRPL48-212ENST00000543374 STAB1Q9NY15 2570 aa0.39□□□□□ -2.35
MRPL48-212ENST00000543374 DEFB110Q30KQ9 67 aa0.39□□□□□ -2.35
MRPL48-212ENST00000543374 DNAH3Q8TD57 4116 aa0.39□□□□□ -2.35
MRPL48-212ENST00000543374 LRRK2Q5S007 2527 aa0.39□□□□□ -2.35
MRPL48-212ENST00000543374 DMXL1Q9Y485 3027 aa0.39□□□□□ -2.35
MRPL48-212ENST00000543374 RIF1Q5UIP0 2472 aaKnown RBP0.39□□□□□ -2.35
MRPL48-212ENST00000543374 HECTD4Q9Y4D8 3996 aa0.38□□□□□ -2.35
MRPL48-212ENST00000543374 COL6A3P12111 3177 aa0.38□□□□□ -2.35
MRPL48-212ENST00000543374 MT1AP04731 61 aa0.38□□□□□ -2.35
MRPL48-212ENST00000543374 RPL39P62891 51 aaKnown RBP0.38□□□□□ -2.35
MRPL48-212ENST00000543374 ANKHD1Q8IWZ3 2542 aaKnown RBP0.38□□□□□ -2.35
MRPL48-212ENST00000543374 SONP18583 2426 aaKnown RBP0.38□□□□□ -2.35
MRPL48-212ENST00000543374 DMBT1Q9UGM3 2413 aaPredicted RBP0.38□□□□□ -2.35
MRPL48-212ENST00000543374 COL7A1Q02388 2944 aa0.37□□□□□ -2.35
MRPL48-212ENST00000543374 GPR98Q8WXG9 6306 aa0.37□□□□□ -2.35
MRPL48-212ENST00000543374 MUC5ACP98088 5654 aa0.37□□□□□ -2.35
MRPL48-212ENST00000543374 NBEAQ8NFP9 2946 aa0.36□□□□□ -2.35
MRPL48-212ENST00000543374 HSPG2P98160 4391 aa0.36□□□□□ -2.35
MRPL48-212ENST00000543374 TENM2Q9NT68 2774 aa0.35□□□□□ -2.35
MRPL48-212ENST00000543374 PKHD1P08F94 4074 aa0.35□□□□□ -2.35
MRPL48-212ENST00000543374 SPG11Q96JI7 2443 aa0.35□□□□□ -2.35
MRPL48-212ENST00000543374 FLGP20930 4061 aaPredicted RBP0.35□□□□□ -2.35
MRPL48-212ENST00000543374 CUBNO60494 3623 aa0.35□□□□□ -2.35
MRPL48-212ENST00000543374 ANK3Q12955 4377 aaKnown RBP0.34□□□□□ -2.35
MRPL48-212ENST00000543374 DNAH11Q96DT5 4516 aa0.34□□□□□ -2.35
MRPL48-212ENST00000543374 COL6A5A8TX70 2615 aa0.34□□□□□ -2.36
MRPL48-212ENST00000543374 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.36
MRPL48-212ENST00000543374 TEP1Q99973 2627 aaKnown RBP0.34□□□□□ -2.36
MRPL48-212ENST00000543374 DNAH9Q9NYC9 4486 aa0.34□□□□□ -2.36
MRPL48-212ENST00000543374 FAM186AA6NE01 2351 aa0.34□□□□□ -2.36
MRPL48-212ENST00000543374 TGP01266 2768 aa0.34□□□□□ -2.36
MRPL48-212ENST00000543374 RPL39LQ96EH5 51 aaKnown RBP0.33□□□□□ -2.36
MRPL48-212ENST00000543374 MAP1AP78559 2803 aaPredicted RBP0.33□□□□□ -2.36
MRPL48-212ENST00000543374 ZANQ9Y493 2812 aa0.33□□□□□ -2.36
MRPL48-212ENST00000543374 RANBP2P49792 3224 aaKnown RBP0.33□□□□□ -2.36
MRPL48-212ENST00000543374 HTTP42858 3142 aa0.33□□□□□ -2.36
MRPL48-212ENST00000543374 SPRR2EP22531 72 aa0.32□□□□□ -2.36
MRPL48-212ENST00000543374 HIVEP1P15822 2718 aa0.32□□□□□ -2.36
MRPL48-212ENST00000543374 FASNP49327 2511 aaKnown RBP0.32□□□□□ -2.36
MRPL48-212ENST00000543374 NBEAL2Q6ZNJ1 2754 aa0.32□□□□□ -2.36
MRPL48-212ENST00000543374 KALRNO60229 2985 aa0.31□□□□□ -2.36
MRPL48-212ENST00000543374 SPART-AS1P0CW21 52 aa0.31□□□□□ -2.36
MRPL48-212ENST00000543374 KRTAP8-1Q8IUC2 63 aa0.31□□□□□ -2.36
MRPL48-212ENST00000543374 TOMM7Q9P0U1 55 aa0.31□□□□□ -2.36
MRPL48-212ENST00000543374 PKHD1L1Q86WI1 4243 aa0.31□□□□□ -2.36
MRPL48-212ENST00000543374 ACACBO00763 2458 aa0.3□□□□□ -2.36
MRPL48-212ENST00000543374 LRP1BQ9NZR2 4599 aa0.3□□□□□ -2.36
MRPL48-212ENST00000543374 STAB2Q8WWQ8 2551 aa0.3□□□□□ -2.36
MRPL48-212ENST00000543374 DNAH2Q9P225 4427 aa0.3□□□□□ -2.36
MRPL48-212ENST00000543374 HMCN2Q8NDA2 5059 aa0.3□□□□□ -2.36
MRPL48-212ENST00000543374 KMT2DO14686 5537 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms