RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 J3QKU1 62 aa2.56□□□□□ -2
SNHG1-219ENST00000542112 MT3P25713 68 aa2.56□□□□□ -2
SNHG1-219ENST00000542112 KRTAP1-1Q07627 177 aa2.56□□□□□ -2
SNHG1-219ENST00000542112 LELP1Q5T871 98 aa2.56□□□□□ -2
SNHG1-219ENST00000542112 C15orf56Q8N910 161 aa2.56□□□□□ -2
SNHG1-219ENST00000542112 KRTAP1-5Q9BYS1 174 aa2.56□□□□□ -2
SNHG1-219ENST00000542112 FN1P02751 2386 aaKnown RBP2.56□□□□□ -2
SNHG1-219ENST00000542112 LY6EQ16553 131 aa2.55□□□□□ -2
SNHG1-219ENST00000542112 KRTAP11-1Q8IUC1 163 aa2.55□□□□□ -2
SNHG1-219ENST00000542112 CSMD1Q96PZ7 3565 aa2.55□□□□□ -2
SNHG1-219ENST00000542112 F8P00451 2351 aa2.54□□□□□ -2
SNHG1-219ENST00000542112 NF1P21359 2839 aa2.54□□□□□ -2
SNHG1-219ENST00000542112 SETXQ7Z333 2677 aaKnown RBP2.54□□□□□ -2
SNHG1-219ENST00000542112 NSD1Q96L73 2696 aaPredicted RBP2.54□□□□□ -2
SNHG1-219ENST00000542112 SETD2Q9BYW2 2564 aaPredicted RBP2.54□□□□□ -2
SNHG1-219ENST00000542112 NOTCH2Q04721 2471 aa2.54□□□□□ -2
SNHG1-219ENST00000542112 C2CD3Q4AC94 2353 aa2.54□□□□□ -2
SNHG1-219ENST00000542112 OTOGQ6ZRI0 2925 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 SVEP1Q4LDE5 3571 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 CSMD2Q7Z408 3487 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 HIVEP1P15822 2718 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 A0A1B0GVX0 72 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 BRD3OSQ6XYD6 125 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 COX6B2Q6YFQ2 88 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 MAPK1IP1LQ8NDC0 245 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 HIVEP2P31629 2446 aa2.53□□□□□ -2
SNHG1-219ENST00000542112 BAHCC1Q9P281 2608 aa2.52□□□□□ -2.01
SNHG1-219ENST00000542112 PANO1I0J062 215 aa2.52□□□□□ -2.01
SNHG1-219ENST00000542112 KRTAP13-3Q3SY46 172 aa2.52□□□□□ -2.01
SNHG1-219ENST00000542112 Q96NJ1 140 aa2.51□□□□□ -2.01
SNHG1-219ENST00000542112 FLNBO75369 2602 aaKnown RBP2.5□□□□□ -2.01
SNHG1-219ENST00000542112 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
SNHG1-219ENST00000542112 CIRBP-AS1Q8TBR5 109 aa2.5□□□□□ -2.01
SNHG1-219ENST00000542112 NOTCH3Q9UM47 2321 aa2.5□□□□□ -2.01
SNHG1-219ENST00000542112 JMJD1CQ15652 2540 aa2.49□□□□□ -2.01
SNHG1-219ENST00000542112 ALMS1Q8TCU4 4167 aa2.49□□□□□ -2.01
SNHG1-219ENST00000542112 NBDYA0A0U1RRE5 68 aa2.49□□□□□ -2.01
SNHG1-219ENST00000542112 C10orf99Q6UWK7 81 aa2.49□□□□□ -2.01
SNHG1-219ENST00000542112 SSBP3-AS1Q7Z2R9 100 aa2.49□□□□□ -2.01
SNHG1-219ENST00000542112 TEP1Q99973 2627 aaKnown RBP2.49□□□□□ -2.01
SNHG1-219ENST00000542112 A0A0G2JQZ4 141 aa2.48□□□□□ -2.01
SNHG1-219ENST00000542112 H3BNG1 76 aa2.48□□□□□ -2.01
SNHG1-219ENST00000542112 GIG44P09565 113 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-219ENST00000542112 A0A1B0GU33 70 aa2.47□□□□□ -2.01
SNHG1-219ENST00000542112 A0A1W2PNN7 141 aa2.47□□□□□ -2.01
SNHG1-219ENST00000542112 CUBNO60494 3623 aa2.47□□□□□ -2.01
SNHG1-219ENST00000542112 ATRQ13535 2644 aa2.46□□□□□ -2.02
SNHG1-219ENST00000542112 H0YAA0 97 aa2.46□□□□□ -2.02
SNHG1-219ENST00000542112 SMR3AQ99954 134 aa2.46□□□□□ -2.02
SNHG1-219ENST00000542112 PSORS1C2Q9UIG4 136 aa2.46□□□□□ -2.02
SNHG1-219ENST00000542112 TENM1Q9UKZ4 2725 aa2.46□□□□□ -2.02
SNHG1-219ENST00000542112 CMYA5Q8N3K9 4069 aa2.45□□□□□ -2.02
SNHG1-219ENST00000542112 DEFB130BP0DP73 79 aa2.45□□□□□ -2.02
SNHG1-219ENST00000542112 DEFB130AP0DP74 79 aa2.45□□□□□ -2.02
SNHG1-219ENST00000542112 C14orf177Q52M58 125 aa2.45□□□□□ -2.02
SNHG1-219ENST00000542112 Q6ZSA8 131 aa2.45□□□□□ -2.02
SNHG1-219ENST00000542112 CRIPTQ9P021 101 aa2.45□□□□□ -2.02
SNHG1-219ENST00000542112 KRTAP10-3P60369 221 aa2.44□□□□□ -2.02
SNHG1-219ENST00000542112 H1FX-AS1Q4G0G2 97 aa2.44□□□□□ -2.02
SNHG1-219ENST00000542112 VWFP04275 2813 aa2.44□□□□□ -2.02
SNHG1-219ENST00000542112 STAB1Q9NY15 2570 aa2.44□□□□□ -2.02
SNHG1-219ENST00000542112 DEFB136Q30KP8 78 aa2.43□□□□□ -2.02
SNHG1-219ENST00000542112 KRTAP7-1Q8IUC3 87 aa2.43□□□□□ -2.02
SNHG1-219ENST00000542112 DNAH3Q8TD57 4116 aa2.43□□□□□ -2.02
SNHG1-219ENST00000542112 NIPBLQ6KC79 2804 aaeCLIP2.41□□□□□ -2.028e-27■■■■□ 21.5
SNHG1-219ENST00000542112 RPL37P61927 97 aaKnown RBP2.41□□□□□ -2.02
SNHG1-219ENST00000542112 LINC01556Q5JQF7 62 aa2.41□□□□□ -2.02
SNHG1-219ENST00000542112 MAST4O15021 2626 aa2.41□□□□□ -2.02
SNHG1-219ENST00000542112 A0A096LPF7 62 aa2.4□□□□□ -2.03
SNHG1-219ENST00000542112 SPART-AS1P0CW21 52 aa2.4□□□□□ -2.03
SNHG1-219ENST00000542112 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.03
SNHG1-219ENST00000542112 TRRAPQ9Y4A5 3859 aa2.4□□□□□ -2.03
SNHG1-219ENST00000542112 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
SNHG1-219ENST00000542112 TPRXLQ17RH7 258 aa2.38□□□□□ -2.03
SNHG1-219ENST00000542112 TENM3Q9P273 2699 aa2.37□□□□□ -2.03
SNHG1-219ENST00000542112 PRO2289Q9P1D8 64 aa2.37□□□□□ -2.03
SNHG1-219ENST00000542112 PKD1L1Q8TDX9 2849 aa2.37□□□□□ -2.03
SNHG1-219ENST00000542112 NOTCH1P46531 2555 aa2.37□□□□□ -2.03
SNHG1-219ENST00000542112 K7EIL1 84 aa2.36□□□□□ -2.03
SNHG1-219ENST00000542112 PRLHP81277 87 aa2.36□□□□□ -2.03
SNHG1-219ENST00000542112 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
SNHG1-219ENST00000542112 FBN1P35555 2871 aaKnown RBP2.36□□□□□ -2.03
SNHG1-219ENST00000542112 NBEAL1Q6ZS30 2694 aa2.35□□□□□ -2.03
SNHG1-219ENST00000542112 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.03
SNHG1-219ENST00000542112 KRTAP13-1Q8IUC0 172 aa2.34□□□□□ -2.03
SNHG1-219ENST00000542112 ANK2Q01484 3957 aa2.34□□□□□ -2.04
SNHG1-219ENST00000542112 MGAM2Q2M2H8 2515 aa2.33□□□□□ -2.04
SNHG1-219ENST00000542112 HUWE1Q7Z6Z7 4374 aaKnown RBP2.31□□□□□ -2.04
SNHG1-219ENST00000542112 DNAH9Q9NYC9 4486 aa2.31□□□□□ -2.04
SNHG1-219ENST00000542112 INE1O15225 51 aa2.3□□□□□ -2.04
SNHG1-219ENST00000542112 TYMSOSQ8TAI1 123 aa2.3□□□□□ -2.04
SNHG1-219ENST00000542112 DYNC2H1Q8NCM8 4307 aaKnown RBP2.29□□□□□ -2.04
SNHG1-219ENST00000542112 SPINK1P00995 79 aa2.28□□□□□ -2.04
SNHG1-219ENST00000542112 Q6ZRN7 208 aaPredicted RBP2.28□□□□□ -2.04
SNHG1-219ENST00000542112 STAB2Q8WWQ8 2551 aa2.28□□□□□ -2.04
SNHG1-219ENST00000542112 COL7A1Q02388 2944 aa2.27□□□□□ -2.05
SNHG1-219ENST00000542112 A0A096LNI7 61 aa2.27□□□□□ -2.05
SNHG1-219ENST00000542112 HTN3P15516 51 aa2.27□□□□□ -2.05
SNHG1-219ENST00000542112 TENM2Q9NT68 2774 aa2.26□□□□□ -2.05
SNHG1-219ENST00000542112 DEFB135Q30KP9 77 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms