RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 ACYP1P07311 99 aa3.89□□□□□ -1.79
CLTCL1-206ENST00000540896 A0A1B0GW54 56 aa3.88□□□□□ -1.79
CLTCL1-206ENST00000540896 OXTP01178 125 aa3.88□□□□□ -1.79
CLTCL1-206ENST00000540896 A0A087WSZ3 146 aa3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 TRBV7-7A0A0K0K1E9 115 aa3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 FAM240AA0A1B0GVK7 77 aa3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 CD164Q04900 197 aa3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 NREPQ16612 68 aa3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 Q6Q795 121 aa3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 LINC00304Q8N9R0 145 aa3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 UBL5Q9BZL1 73 aa3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
CLTCL1-206ENST00000540896 SPAG11AQ6PDA7 123 aa3.86□□□□□ -1.79
CLTCL1-206ENST00000540896 LINC00846Q9NV44 126 aa3.86□□□□□ -1.79
CLTCL1-206ENST00000540896 SS18L2Q9UHA2 77 aa3.86□□□□□ -1.79
CLTCL1-206ENST00000540896 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
CLTCL1-206ENST00000540896 SPINK1P00995 79 aa3.85□□□□□ -1.79
CLTCL1-206ENST00000540896 KRTAP10-8P60410 259 aa3.84□□□□□ -1.79
CLTCL1-206ENST00000540896 LIMD2Q9BT23 127 aa3.84□□□□□ -1.79
CLTCL1-206ENST00000540896 MT1HL1P0DM35 61 aa3.83□□□□□ -1.8
CLTCL1-206ENST00000540896 Q6ZVQ6 151 aa3.83□□□□□ -1.8
CLTCL1-206ENST00000540896 TNXBP22105 4242 aa3.82□□□□□ -1.8
CLTCL1-206ENST00000540896 DEFB116Q30KQ4 102 aa3.82□□□□□ -1.8
CLTCL1-206ENST00000540896 LINC00643Q86TS7 51 aa3.82□□□□□ -1.8
CLTCL1-206ENST00000540896 IGKV3D-7A0A0C4DH55 119 aa3.81□□□□□ -1.8
CLTCL1-206ENST00000540896 BPY2O14599 106 aa3.81□□□□□ -1.8
CLTCL1-206ENST00000540896 J3KT08 172 aa3.8□□□□□ -1.8
CLTCL1-206ENST00000540896 IGKV4-1P06312 121 aa3.8□□□□□ -1.8
CLTCL1-206ENST00000540896 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
CLTCL1-206ENST00000540896 SIGMAR1Q99720 223 aa3.8□□□□□ -1.8
CLTCL1-206ENST00000540896 ASB16-AS1Q495Z4 193 aa3.79□□□□□ -1.8
CLTCL1-206ENST00000540896 ATP5EP2Q5VTU8 51 aa3.79□□□□□ -1.8
CLTCL1-206ENST00000540896 Q5XG85 94 aa3.79□□□□□ -1.8
CLTCL1-206ENST00000540896 LINC00472Q9H8W2 130 aa3.79□□□□□ -1.8
CLTCL1-206ENST00000540896 NDUFB1O75438 58 aa3.78□□□□□ -1.8
CLTCL1-206ENST00000540896 CXCL6P80162 114 aa3.78□□□□□ -1.8
CLTCL1-206ENST00000540896 C1orf195Q5TG92 126 aa3.78□□□□□ -1.8
CLTCL1-206ENST00000540896 HIST1H4AP62805 103 aaKnown RBP3.77□□□□□ -1.81
CLTCL1-206ENST00000540896 Q96NJ1 140 aa3.77□□□□□ -1.81
CLTCL1-206ENST00000540896 RETNLBQ9BQ08 111 aa3.77□□□□□ -1.81
CLTCL1-206ENST00000540896 MT-ATP8P03928 68 aa3.76□□□□□ -1.81
CLTCL1-206ENST00000540896 Q8N9L7 120 aa3.76□□□□□ -1.81
CLTCL1-206ENST00000540896 IGHV6-1A0A0B4J1U7 121 aa3.75□□□□□ -1.81
CLTCL1-206ENST00000540896 A8MWP4 228 aa3.75□□□□□ -1.81
CLTCL1-206ENST00000540896 DSCR10P59022 87 aa3.75□□□□□ -1.81
CLTCL1-206ENST00000540896 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
CLTCL1-206ENST00000540896 K7EQZ3 153 aa3.74□□□□□ -1.81
CLTCL1-206ENST00000540896 PRR15Q8IV56 129 aa3.74□□□□□ -1.81
CLTCL1-206ENST00000540896 A0A1B0GVX0 72 aa3.73□□□□□ -1.81
CLTCL1-206ENST00000540896 PRR4Q16378 134 aa3.73□□□□□ -1.81
CLTCL1-206ENST00000540896 IMUPQ9GZP8 106 aa3.72□□□□□ -1.81
CLTCL1-206ENST00000540896 IGLV7-46A0A075B6I9 117 aa3.71□□□□□ -1.82
CLTCL1-206ENST00000540896 A0A087WVE0 104 aa3.71□□□□□ -1.82
CLTCL1-206ENST00000540896 LINC00313P59037 77 aa3.71□□□□□ -1.82
CLTCL1-206ENST00000540896 FP248Q71RG6 208 aaPredicted RBP3.71□□□□□ -1.82
CLTCL1-206ENST00000540896 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 C9orf92A6NGG3 77 aa3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 HCG22E2RYF7 251 aa3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 C8orf87E5RJ46 101 aa3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 SCGB1A1P11684 91 aa3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 CASC2Q6XLA1 102 aa3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 WFDC13Q8IUB5 93 aa3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 C8orf17Q9NRJ1 99 aa3.7□□□□□ -1.82
CLTCL1-206ENST00000540896 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
CLTCL1-206ENST00000540896 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
CLTCL1-206ENST00000540896 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
CLTCL1-206ENST00000540896 hDV103S1A0JD37 113 aa3.68□□□□□ -1.82
CLTCL1-206ENST00000540896 NDUFS5O43920 106 aa3.68□□□□□ -1.82
CLTCL1-206ENST00000540896 SEC61BP60468 96 aaKnown RBP3.68□□□□□ -1.82
CLTCL1-206ENST00000540896 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
CLTCL1-206ENST00000540896 NOTCH2NLQ7Z3S9 236 aa3.68□□□□□ -1.82
CLTCL1-206ENST00000540896 MPLKIPQ8TAP9 179 aa3.68□□□□□ -1.82
CLTCL1-206ENST00000540896 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
CLTCL1-206ENST00000540896 FAM236AA0A1B0GUQ0 79 aa3.66□□□□□ -1.82
CLTCL1-206ENST00000540896 FAM236BA0A1B0GV22 79 aa3.66□□□□□ -1.82
CLTCL1-206ENST00000540896 TMEM254Q8TBM7 123 aa3.66□□□□□ -1.82
CLTCL1-206ENST00000540896 MRPL34Q9BQ48 92 aaKnown RBP3.66□□□□□ -1.82
CLTCL1-206ENST00000540896 Q75L30 129 aa3.65□□□□□ -1.83
CLTCL1-206ENST00000540896 KRTAP13-3Q3SY46 172 aa3.64□□□□□ -1.83
CLTCL1-206ENST00000540896 ATOX1O00244 68 aa3.63□□□□□ -1.83
CLTCL1-206ENST00000540896 KRTAP16-1A8MUX0 517 aa3.62□□□□□ -1.83
CLTCL1-206ENST00000540896 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
CLTCL1-206ENST00000540896 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
CLTCL1-206ENST00000540896 SMIM20Q8N5G0 67 aa3.62□□□□□ -1.83
CLTCL1-206ENST00000540896 TP53AIP1Q9HCN2 124 aa3.62□□□□□ -1.83
CLTCL1-206ENST00000540896 LPAP08519 4548 aa3.61□□□□□ -1.83
CLTCL1-206ENST00000540896 UQCRQO14949 82 aa3.6□□□□□ -1.83
CLTCL1-206ENST00000540896 ATP11AUNQ6ZP68 121 aa3.6□□□□□ -1.83
CLTCL1-206ENST00000540896 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
CLTCL1-206ENST00000540896 LRP2P98164 4655 aa3.59□□□□□ -1.83
CLTCL1-206ENST00000540896 TRAV7A0A075B6U4 112 aa3.59□□□□□ -1.83
CLTCL1-206ENST00000540896 A8MUU9 505 aa3.59□□□□□ -1.83
CLTCL1-206ENST00000540896 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
CLTCL1-206ENST00000540896 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
CLTCL1-206ENST00000540896 OCR1Q9BZK8 76 aa3.59□□□□□ -1.83
CLTCL1-206ENST00000540896 SERP2Q8N6R1 65 aa3.58□□□□□ -1.84
CLTCL1-206ENST00000540896 MP68P56378 58 aa3.57□□□□□ -1.84
CLTCL1-206ENST00000540896 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
CLTCL1-206ENST00000540896 C5orf47Q569G3 176 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms