RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TYMSOS	Q8TAI1	123 aa		3.44	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	NDUFS5	O43920	106 aa		3.44	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	IGLV8-61	A0A075B6I0	122 aa		3.43	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	CD164	Q04900	197 aa		3.43	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	IGLV9-49	A0A0B4J1Y8	123 aa		3.43	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	MMP24-AS1	A0A0U1RRL7	71 aa		3.43	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	BIRC6	Q9NR09	4857 aa		3.43	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	SSBP3-AS1	Q7Z2R9	100 aa		3.42	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	RBM12B-AS1	Q9P1G2	102 aa		3.42	□□□□□ -1.86
RAPGEF4-215	ENST00000540783		H3BPC8	53 aa		3.42	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	DYNC2H1	Q8NCM8	4307 aa	Known RBP	3.42	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	IGLV7-46	A0A075B6I9	117 aa		3.42	□□□□□ -1.86
RAPGEF4-215	ENST00000540783		A0A1B0GVY2	172 aa		3.42	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	KTN1-AS1	Q86SY8	53 aa		3.42	□□□□□ -1.86
RAPGEF4-215	ENST00000540783		Q75L30	129 aa		3.41	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	PRKDC	P78527	4128 aa	Known RBP	3.41	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	IGHV6-1	A0A0B4J1U7	121 aa		3.41	□□□□□ -1.86
RAPGEF4-215	ENST00000540783		Q6ZSA8	131 aa		3.41	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	LOC101927531	A0A1B0GV80	90 aa		3.41	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	SPINK7	P58062	85 aa		3.41	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	ATP11AUN	Q6ZP68	121 aa		3.41	□□□□□ -1.86
RAPGEF4-215	ENST00000540783	DMBT1	Q9UGM3	2413 aa	Predicted RBP	3.4	□□□□□ -1.87
RAPGEF4-215	ENST00000540783		A0A0A0MQY5	61 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	PANO1	I0J062	215 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	ANAPC11	Q9NYG5	84 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783		A0A087X002	238 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783		A6NN06	94 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	MOBP	Q13875	183 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	NOTCH2NL	Q7Z3S9	236 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	LINC00304	Q8N9R0	145 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	HRES1	P13985	223 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	PRR26	Q8N8Z3	221 aa		3.39	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	CDC42SE1	Q9NRR8	79 aa		3.38	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.38	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	C8orf17	Q9NRJ1	99 aa		3.38	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	DNAH9	Q9NYC9	4486 aa		3.38	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	SPRR1B	P22528	89 aa		3.37	□□□□□ -1.87
RAPGEF4-215	ENST00000540783		Q96NJ1	140 aa		3.37	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	LINC01558	Q9Y6Z2	57 aa		3.37	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	SPINK1	P00995	79 aa		3.35	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	PRAC1	Q96KF2	57 aa		3.35	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	TP53AIP1	Q9HCN2	124 aa		3.35	□□□□□ -1.87
RAPGEF4-215	ENST00000540783		A0A1B0GVX0	72 aa		3.34	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	C7orf65	Q6ZTY9	151 aa		3.34	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	RETNLB	Q9BQ08	111 aa		3.34	□□□□□ -1.87
RAPGEF4-215	ENST00000540783		Q5W150	140 aa		3.34	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	MRPL34	Q9BQ48	92 aa	Known RBP	3.34	□□□□□ -1.87
RAPGEF4-215	ENST00000540783	ASB16-AS1	Q495Z4	193 aa		3.33	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	ADM2	Q7Z4H4	148 aa		3.33	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	KRTAP13-1	Q8IUC0	172 aa		3.32	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	FRAS1	Q86XX4	4008 aa		3.32	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	FLG2	Q5D862	2391 aa	Predicted RBP	3.31	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	LINC00313	P59037	77 aa		3.31	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	STARD9	Q9P2P6	4700 aa		3.31	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	DNAH2	Q9P225	4427 aa		3.3	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	PLEC	Q15149	4684 aa	Known RBP	3.29	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	KMT2A	Q03164	3969 aa		3.29	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	DNAH8	Q96JB1	4490 aa		3.28	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	RYR3	Q15413	4870 aa		3.28	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	LINC00483	Q53H64	154 aa		3.28	□□□□□ -1.88
RAPGEF4-215	ENST00000540783	ACYP2	P14621	99 aa		3.27	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	HECTD4	Q9Y4D8	3996 aa		3.27	□□□□□ -1.89
RAPGEF4-215	ENST00000540783		A0A1B0GU69	56 aa		3.27	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	C8orf87	E5RJ46	101 aa		3.26	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	RPS29	P62273	56 aa	Known RBP	3.26	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	VPS13D	Q5THJ4	4388 aa		3.26	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	KRTAP13-3	Q3SY46	172 aa		3.26	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	HYDIN	Q4G0P3	5121 aa		3.24	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	DMAC1	Q96GE9	116 aa		3.23	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	IGKV2D-30	A0A075B6S6	120 aa		3.23	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	IGKV2-30	P06310	120 aa		3.23	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.22	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	MIR22HG	Q0VDD5	57 aa		3.22	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	ALMS1	Q8TCU4	4167 aa		3.22	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	DNAH17	Q9UFH2	4485 aa		3.22	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	SEC61B	P60468	96 aa	Known RBP	3.21	□□□□□ -1.89
RAPGEF4-215	ENST00000540783	LINC01554	Q52M75	96 aa		3.21	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	SPATA8	Q6RVD6	105 aa		3.21	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	PKD1	P98161	4303 aa		3.21	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	FAT2	Q9NYQ8	4349 aa		3.21	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	UQCR11	O14957	56 aa		3.2	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	CSAG1	Q6PB30	78 aa		3.2	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	DNAH6	Q9C0G6	4158 aa		3.2	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	HERC2	O95714	4834 aa		3.19	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	DNAH11	Q96DT5	4516 aa		3.18	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	KRTAP1-4	P0C5Y4	121 aa		3.18	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	KRTAP10-8	P60410	259 aa		3.17	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	KRTAP13-2	Q52LG2	175 aa		3.17	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	PCLO	Q9Y6V0	5065 aa		3.17	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	C9orf92	A6NGG3	77 aa		3.15	□□□□□ -1.9
RAPGEF4-215	ENST00000540783	LCE2B	O14633	110 aa		3.15	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	SACS	Q9NZJ4	4579 aa		3.14	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	KRTAP16-1	A8MUX0	517 aa		3.14	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	COX6B2	Q6YFQ2	88 aa		3.14	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	DNAH5	Q8TE73	4624 aa		3.14	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	PKHD1	P08F94	4074 aa		3.13	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	LRP1B	Q9NZR2	4599 aa		3.13	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	KRTAP4-5	Q9BYR2	181 aa		3.13	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	EPPK1	P58107	5090 aa	Known RBP	3.13	□□□□□ -1.91
RAPGEF4-215	ENST00000540783	RYR2	Q92736	4967 aa		3.11	□□□□□ -1.91

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