RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 PLAC8Q9NZF1 115 aa6.78□□□□□ -1.32
CPT1A-206ENST00000540367 C8orf87E5RJ46 101 aa6.77□□□□□ -1.33
CPT1A-206ENST00000540367 C7orf65Q6ZTY9 151 aa6.77□□□□□ -1.33
CPT1A-206ENST00000540367 A0A1B0GVX0 72 aa6.76□□□□□ -1.33
CPT1A-206ENST00000540367 LINC00483Q53H64 154 aa6.75□□□□□ -1.33
CPT1A-206ENST00000540367 SPAG11AQ6PDA7 123 aa6.75□□□□□ -1.33
CPT1A-206ENST00000540367 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
CPT1A-206ENST00000540367 APLNQ9ULZ1 77 aa6.75□□□□□ -1.33
CPT1A-206ENST00000540367 HECTD4Q9Y4D8 3996 aa6.74□□□□□ -1.33
CPT1A-206ENST00000540367 HRES1P13985 223 aa6.74□□□□□ -1.33
CPT1A-206ENST00000540367 MRPL34Q9BQ48 92 aaKnown RBP6.74□□□□□ -1.33
CPT1A-206ENST00000540367 FBN3Q75N90 2809 aa6.72□□□□□ -1.33
CPT1A-206ENST00000540367 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
CPT1A-206ENST00000540367 SPACA4Q8TDM5 124 aa6.71□□□□□ -1.34
CPT1A-206ENST00000540367 WWC2-AS2Q96NR7 200 aa6.71□□□□□ -1.34
CPT1A-206ENST00000540367 ZNF706Q9Y5V0 76 aaPredicted RBP6.7□□□□□ -1.34
CPT1A-206ENST00000540367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
CPT1A-206ENST00000540367 PRR26Q8N8Z3 221 aa6.69□□□□□ -1.34
CPT1A-206ENST00000540367 ANAPC11Q9NYG5 84 aa6.69□□□□□ -1.34
CPT1A-206ENST00000540367 Q6ZRN7 208 aaPredicted RBP6.69□□□□□ -1.34
CPT1A-206ENST00000540367 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
CPT1A-206ENST00000540367 A0A087X002 238 aa6.68□□□□□ -1.34
CPT1A-206ENST00000540367 NBDYA0A0U1RRE5 68 aa6.68□□□□□ -1.34
CPT1A-206ENST00000540367 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
CPT1A-206ENST00000540367 SPINK7P58062 85 aa6.68□□□□□ -1.34
CPT1A-206ENST00000540367 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
CPT1A-206ENST00000540367 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.34
CPT1A-206ENST00000540367 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
CPT1A-206ENST00000540367 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
CPT1A-206ENST00000540367 IGLV5-52A0A0A0MRZ9 124 aa6.64□□□□□ -1.35
CPT1A-206ENST00000540367 PSORS1C2Q9UIG4 136 aa6.64□□□□□ -1.35
CPT1A-206ENST00000540367 Q5W150 140 aa6.63□□□□□ -1.35
CPT1A-206ENST00000540367 A0A0A0MQY5 61 aa6.61□□□□□ -1.35
CPT1A-206ENST00000540367 ZNF861PO60384 105 aa6.61□□□□□ -1.35
CPT1A-206ENST00000540367 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
CPT1A-206ENST00000540367 ACYP2P14621 99 aa6.59□□□□□ -1.35
CPT1A-206ENST00000540367 DNAH11Q96DT5 4516 aa6.59□□□□□ -1.36
CPT1A-206ENST00000540367 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.36
CPT1A-206ENST00000540367 A0A087WTM6 91 aa6.58□□□□□ -1.36
CPT1A-206ENST00000540367 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
CPT1A-206ENST00000540367 NUPR2A6NF83 97 aa6.56□□□□□ -1.36
CPT1A-206ENST00000540367 RTL8CO15255 209 aa6.56□□□□□ -1.36
CPT1A-206ENST00000540367 LINC00313P59037 77 aa6.55□□□□□ -1.36
CPT1A-206ENST00000540367 DMAC1Q96GE9 116 aa6.55□□□□□ -1.36
CPT1A-206ENST00000540367 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
CPT1A-206ENST00000540367 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
CPT1A-206ENST00000540367 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
CPT1A-206ENST00000540367 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
CPT1A-206ENST00000540367 FAT2Q9NYQ8 4349 aa6.5□□□□□ -1.37
CPT1A-206ENST00000540367 SSBP3-AS1Q7Z2R9 100 aa6.49□□□□□ -1.37
CPT1A-206ENST00000540367 A0A1B0GU69 56 aa6.48□□□□□ -1.37
CPT1A-206ENST00000540367 LRP1BQ9NZR2 4599 aa6.48□□□□□ -1.37
CPT1A-206ENST00000540367 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
CPT1A-206ENST00000540367 PKD1P98161 4303 aa6.47□□□□□ -1.37
CPT1A-206ENST00000540367 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
CPT1A-206ENST00000540367 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
CPT1A-206ENST00000540367 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
CPT1A-206ENST00000540367 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
CPT1A-206ENST00000540367 LY6G6CO95867 125 aa6.44□□□□□ -1.38
CPT1A-206ENST00000540367 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
CPT1A-206ENST00000540367 UQCR11O14957 56 aa6.42□□□□□ -1.38
CPT1A-206ENST00000540367 SACSQ9NZJ4 4579 aa6.42□□□□□ -1.38
CPT1A-206ENST00000540367 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
CPT1A-206ENST00000540367 KRTAP16-1A8MUX0 517 aa6.4□□□□□ -1.38
CPT1A-206ENST00000540367 ADM2Q7Z4H4 148 aa6.4□□□□□ -1.39
CPT1A-206ENST00000540367 VPS13BQ7Z7G8 4022 aa6.39□□□□□ -1.39
CPT1A-206ENST00000540367 KRTAP10-2P60368 255 aa6.38□□□□□ -1.39
CPT1A-206ENST00000540367 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
CPT1A-206ENST00000540367 C1orf134Q5TEV5 83 aa6.36□□□□□ -1.39
CPT1A-206ENST00000540367 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
CPT1A-206ENST00000540367 KMT2CQ8NEZ4 4911 aaKnown RBP6.34□□□□□ -1.39
CPT1A-206ENST00000540367 FAT1Q14517 4588 aa6.29□□□□□ -1.4
CPT1A-206ENST00000540367 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
CPT1A-206ENST00000540367 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
CPT1A-206ENST00000540367 CSAG1Q6PB30 78 aa6.27□□□□□ -1.4
CPT1A-206ENST00000540367 KRTAP10-1P60331 282 aa6.26□□□□□ -1.41
CPT1A-206ENST00000540367 DYNC1H1Q14204 4646 aaKnown RBP6.26□□□□□ -1.41
CPT1A-206ENST00000540367 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
CPT1A-206ENST00000540367 Q6ZSA8 131 aa6.23□□□□□ -1.41
CPT1A-206ENST00000540367 SPINK1P00995 79 aa6.22□□□□□ -1.41
CPT1A-206ENST00000540367 Q8N1X5 172 aa6.21□□□□□ -1.41
CPT1A-206ENST00000540367 RYR2Q92736 4967 aa6.19□□□□□ -1.42
CPT1A-206ENST00000540367 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
CPT1A-206ENST00000540367 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
CPT1A-206ENST00000540367 RYR3Q15413 4870 aa6.15□□□□□ -1.43
CPT1A-206ENST00000540367 H0YAA0 97 aa6.14□□□□□ -1.43
CPT1A-206ENST00000540367 A8MUU9 505 aa6.13□□□□□ -1.43
CPT1A-206ENST00000540367 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
CPT1A-206ENST00000540367 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
CPT1A-206ENST00000540367 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
CPT1A-206ENST00000540367 LINC00304Q8N9R0 145 aa6.09□□□□□ -1.43
CPT1A-206ENST00000540367 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
CPT1A-206ENST00000540367 A0A1B0GU33 70 aa6.07□□□□□ -1.44
CPT1A-206ENST00000540367 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
CPT1A-206ENST00000540367 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
CPT1A-206ENST00000540367 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
CPT1A-206ENST00000540367 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
CPT1A-206ENST00000540367 C9orf92A6NGG3 77 aa6.05□□□□□ -1.44
CPT1A-206ENST00000540367 ROMO1P60602 79 aa6.03□□□□□ -1.44
CPT1A-206ENST00000540367 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms