RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 IGHV6-1A0A0B4J1U7 121 aa9.92□□□□□ -0.82
LTBR-207ENST00000539925 TMEM258P61165 79 aa9.92□□□□□ -0.82
LTBR-207ENST00000539925 TP53AIP1Q9HCN2 124 aa9.91□□□□□ -0.82
LTBR-207ENST00000539925 LINC00304Q8N9R0 145 aa9.9□□□□□ -0.82
LTBR-207ENST00000539925 SVIPQ8NHG7 77 aa9.9□□□□□ -0.83
LTBR-207ENST00000539925 PRR26Q8N8Z3 221 aa9.89□□□□□ -0.83
LTBR-207ENST00000539925 A0A0U1RQV1 116 aa9.88□□□□□ -0.83
LTBR-207ENST00000539925 H3BPC8 53 aa9.88□□□□□ -0.83
LTBR-207ENST00000539925 C1orf195Q5TG92 126 aa9.88□□□□□ -0.83
LTBR-207ENST00000539925 APOBP04114 4563 aaKnown RBP9.87□□□□□ -0.83
LTBR-207ENST00000539925 MP68P56378 58 aa9.87□□□□□ -0.83
LTBR-207ENST00000539925 MRPL34Q9BQ48 92 aaKnown RBP9.86□□□□□ -0.83
LTBR-207ENST00000539925 SNURFQ9Y675 71 aa9.85□□□□□ -0.83
LTBR-207ENST00000539925 CYSTM1Q9H1C7 97 aa9.83□□□□□ -0.84
LTBR-207ENST00000539925 H7BZZ5 65 aa9.83□□□□□ -0.84
LTBR-207ENST00000539925 LINC00313P59037 77 aa9.8□□□□□ -0.84
LTBR-207ENST00000539925 ATP5EP56381 51 aaPredicted RBP9.8□□□□□ -0.84
LTBR-207ENST00000539925 Q5VSD8 79 aa9.79□□□□□ -0.84
LTBR-207ENST00000539925 TRAV22A0A0B4J277 110 aa9.78□□□□□ -0.84
LTBR-207ENST00000539925 H0Y9P7 68 aa9.77□□□□□ -0.84
LTBR-207ENST00000539925 ZCCHC13Q8WW36 166 aaKnown RBP9.77□□□□□ -0.84
LTBR-207ENST00000539925 NDUFS5O43920 106 aa9.76□□□□□ -0.85
LTBR-207ENST00000539925 FAM236DA0A1B0GTK5 79 aa9.74□□□□□ -0.85
LTBR-207ENST00000539925 FAM236CP0DP71 79 aa9.74□□□□□ -0.85
LTBR-207ENST00000539925 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
LTBR-207ENST00000539925 FAT1Q14517 4588 aa9.73□□□□□ -0.85
LTBR-207ENST00000539925 LINC00208Q96KT6 92 aa9.72□□□□□ -0.85
LTBR-207ENST00000539925 RPS28P62857 69 aaKnown RBP9.71□□□□□ -0.86
LTBR-207ENST00000539925 Q8N9P0 234 aaPredicted RBP9.69□□□□□ -0.86
LTBR-207ENST00000539925 C1orf64Q8NEQ6 169 aa9.69□□□□□ -0.86
LTBR-207ENST00000539925 Q8N1X5 172 aa9.67□□□□□ -0.86
LTBR-207ENST00000539925 RYR3Q15413 4870 aa9.66□□□□□ -0.86
LTBR-207ENST00000539925 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
LTBR-207ENST00000539925 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
LTBR-207ENST00000539925 LOC101927531A0A1B0GV80 90 aa9.61□□□□□ -0.87
LTBR-207ENST00000539925 SPANXA2-OT1Q8N9U9 137 aa9.61□□□□□ -0.87
LTBR-207ENST00000539925 SERP1Q9Y6X1 66 aa9.61□□□□□ -0.87
LTBR-207ENST00000539925 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
LTBR-207ENST00000539925 HSPG2P98160 4391 aa9.59□□□□□ -0.87
LTBR-207ENST00000539925 RYR1P21817 5038 aa9.56□□□□□ -0.88
LTBR-207ENST00000539925 KRTAP13-3Q3SY46 172 aa9.56□□□□□ -0.88
LTBR-207ENST00000539925 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
LTBR-207ENST00000539925 FP248Q71RG6 208 aaPredicted RBP9.53□□□□□ -0.88
LTBR-207ENST00000539925 Q5W150 140 aa9.52□□□□□ -0.89
LTBR-207ENST00000539925 OXTP01178 125 aa9.49□□□□□ -0.89
LTBR-207ENST00000539925 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
LTBR-207ENST00000539925 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
LTBR-207ENST00000539925 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.89
LTBR-207ENST00000539925 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
LTBR-207ENST00000539925 A8MUU9 505 aa9.44□□□□□ -0.9
LTBR-207ENST00000539925 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
LTBR-207ENST00000539925 RETNLBQ9BQ08 111 aa9.44□□□□□ -0.9
LTBR-207ENST00000539925 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
LTBR-207ENST00000539925 MT1HL1P0DM35 61 aa9.41□□□□□ -0.9
LTBR-207ENST00000539925 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
LTBR-207ENST00000539925 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
LTBR-207ENST00000539925 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
LTBR-207ENST00000539925 Q75L30 129 aa9.37□□□□□ -0.91
LTBR-207ENST00000539925 PRR4Q16378 134 aa9.36□□□□□ -0.91
LTBR-207ENST00000539925 TNXBP22105 4242 aa9.36□□□□□ -0.91
LTBR-207ENST00000539925 C7orf65Q6ZTY9 151 aa9.34□□□□□ -0.91
LTBR-207ENST00000539925 DMBT1Q9UGM3 2413 aaPredicted RBP9.33□□□□□ -0.92
LTBR-207ENST00000539925 LRP1Q07954 4544 aaKnown RBP9.31□□□□□ -0.92
LTBR-207ENST00000539925 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
LTBR-207ENST00000539925 FAT3Q8TDW7 4589 aa9.31□□□□□ -0.92
LTBR-207ENST00000539925 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
LTBR-207ENST00000539925 HRES1P13985 223 aa9.29□□□□□ -0.92
LTBR-207ENST00000539925 ACYP2P14621 99 aa9.26□□□□□ -0.93
LTBR-207ENST00000539925 DMAC1Q96GE9 116 aa9.25□□□□□ -0.93
LTBR-207ENST00000539925 COA5Q86WW8 74 aa9.24□□□□□ -0.93
LTBR-207ENST00000539925 ATP11AUNQ6ZP68 121 aa9.23□□□□□ -0.93
LTBR-207ENST00000539925 BIRC6Q9NR09 4857 aa9.22□□□□□ -0.93
LTBR-207ENST00000539925 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.93
LTBR-207ENST00000539925 V9GYY9 64 aa9.2□□□□□ -0.94
LTBR-207ENST00000539925 KRTAP4-5Q9BYR2 181 aa9.2□□□□□ -0.94
LTBR-207ENST00000539925 A8MUN3 132 aa9.18□□□□□ -0.94
LTBR-207ENST00000539925 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
LTBR-207ENST00000539925 XP32Q5T750 250 aa9.16□□□□□ -0.94
LTBR-207ENST00000539925 SPINK7P58062 85 aa9.15□□□□□ -0.94
LTBR-207ENST00000539925 Q1T7F1 81 aa9.15□□□□□ -0.94
LTBR-207ENST00000539925 J3QL48 77 aa9.13□□□□□ -0.95
LTBR-207ENST00000539925 MYCBP2O75592 4640 aa9.12□□□□□ -0.95
LTBR-207ENST00000539925 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
LTBR-207ENST00000539925 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
LTBR-207ENST00000539925 C4orf26Q17RF5 130 aa9.05□□□□□ -0.96
LTBR-207ENST00000539925 COX6B2Q6YFQ2 88 aa8.98□□□□□ -0.97
LTBR-207ENST00000539925 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
LTBR-207ENST00000539925 SPTSSBQ8NFR3 76 aa8.97□□□□□ -0.97
LTBR-207ENST00000539925 HERC2O95714 4834 aa8.97□□□□□ -0.97
LTBR-207ENST00000539925 PSPHP1O15172 72 aa8.88□□□□□ -0.99
LTBR-207ENST00000539925 SEC61BP60468 96 aaKnown RBP8.88□□□□□ -0.99
LTBR-207ENST00000539925 PRR15LQ9BU68 103 aa8.88□□□□□ -0.99
LTBR-207ENST00000539925 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
LTBR-207ENST00000539925 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
LTBR-207ENST00000539925 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
LTBR-207ENST00000539925 Q5VV11 94 aa8.83□□□□□ -1
LTBR-207ENST00000539925 RBM12B-AS1Q9P1G2 102 aa8.78□□□□□ -1
LTBR-207ENST00000539925 A0A1B0GU69 56 aa8.78□□□□□ -1
LTBR-207ENST00000539925 SEC61GP60059 68 aa8.75□□□□□ -1.01
LTBR-207ENST00000539925 H1FX-AS1Q4G0G2 97 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms