RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 MMP24-AS1A0A0U1RRL7 71 aa11.67□□□□□ -0.54
CDH5-202ENST00000539168 C1orf195Q5TG92 126 aa11.67□□□□□ -0.54
CDH5-202ENST00000539168 C8orf17Q9NRJ1 99 aa11.66□□□□□ -0.54
CDH5-202ENST00000539168 IGHV6-1A0A0B4J1U7 121 aa11.65□□□□□ -0.54
CDH5-202ENST00000539168 C8orf87E5RJ46 101 aa11.65□□□□□ -0.54
CDH5-202ENST00000539168 Q8N1X5 172 aa11.65□□□□□ -0.54
CDH5-202ENST00000539168 hDV103S1A0JD37 113 aa11.65□□□□□ -0.55
CDH5-202ENST00000539168 PKHD1L1Q86WI1 4243 aa11.61□□□□□ -0.55
CDH5-202ENST00000539168 HSPG2P98160 4391 aa11.6□□□□□ -0.55
CDH5-202ENST00000539168 RYR1P21817 5038 aa11.59□□□□□ -0.55
CDH5-202ENST00000539168 TMEM254Q8TBM7 123 aa11.59□□□□□ -0.55
CDH5-202ENST00000539168 C5orf47Q569G3 176 aa11.55□□□□□ -0.56
CDH5-202ENST00000539168 MRPL34Q9BQ48 92 aaKnown RBP11.55□□□□□ -0.56
CDH5-202ENST00000539168 TP53AIP1Q9HCN2 124 aa11.55□□□□□ -0.56
CDH5-202ENST00000539168 C20orf197Q8N268 126 aa11.54□□□□□ -0.56
CDH5-202ENST00000539168 LINC00313P59037 77 aa11.53□□□□□ -0.56
CDH5-202ENST00000539168 KRTAP10-8P60410 259 aa11.53□□□□□ -0.56
CDH5-202ENST00000539168 KLKP1Q107X0 134 aa11.52□□□□□ -0.57
CDH5-202ENST00000539168 MP68P56378 58 aa11.47□□□□□ -0.57
CDH5-202ENST00000539168 NOTCH2NLQ7Z3S9 236 aa11.47□□□□□ -0.57
CDH5-202ENST00000539168 NDUFC1O43677 76 aa11.46□□□□□ -0.57
CDH5-202ENST00000539168 H3BPC8 53 aa11.45□□□□□ -0.58
CDH5-202ENST00000539168 A0A0U1RQV1 116 aa11.44□□□□□ -0.58
CDH5-202ENST00000539168 NDUFS5O43920 106 aa11.44□□□□□ -0.58
CDH5-202ENST00000539168 KRTAP17-1Q9BYP8 105 aa11.43□□□□□ -0.58
CDH5-202ENST00000539168 KIAA1109Q2LD37 5005 aa11.41□□□□□ -0.58
CDH5-202ENST00000539168 TRAV22A0A0B4J277 110 aa11.4□□□□□ -0.58
CDH5-202ENST00000539168 SNURFQ9Y675 71 aa11.4□□□□□ -0.58
CDH5-202ENST00000539168 EPPK1P58107 5090 aaKnown RBP11.4□□□□□ -0.58
CDH5-202ENST00000539168 OXTP01178 125 aa11.39□□□□□ -0.59
CDH5-202ENST00000539168 H0Y9P7 68 aa11.38□□□□□ -0.59
CDH5-202ENST00000539168 Q8N9P0 234 aaPredicted RBP11.38□□□□□ -0.59
CDH5-202ENST00000539168 TMEM258P61165 79 aa11.37□□□□□ -0.59
CDH5-202ENST00000539168 KRTAP16-1A8MUX0 517 aa11.34□□□□□ -0.59
CDH5-202ENST00000539168 CYSTM1Q9H1C7 97 aa11.34□□□□□ -0.59
CDH5-202ENST00000539168 ZCCHC13Q8WW36 166 aaKnown RBP11.33□□□□□ -0.6
CDH5-202ENST00000539168 H7BZZ5 65 aa11.33□□□□□ -0.6
CDH5-202ENST00000539168 FP248Q71RG6 208 aaPredicted RBP11.32□□□□□ -0.6
CDH5-202ENST00000539168 LINC00208Q96KT6 92 aa11.31□□□□□ -0.6
CDH5-202ENST00000539168 FLG2Q5D862 2391 aaPredicted RBP11.3□□□□□ -0.6
CDH5-202ENST00000539168 MT1HL1P0DM35 61 aa11.29□□□□□ -0.6
CDH5-202ENST00000539168 C1orf64Q8NEQ6 169 aa11.28□□□□□ -0.6
CDH5-202ENST00000539168 TNXBP22105 4242 aa11.26□□□□□ -0.61
CDH5-202ENST00000539168 RETNLBQ9BQ08 111 aa11.26□□□□□ -0.61
CDH5-202ENST00000539168 FAT3Q8TDW7 4589 aa11.25□□□□□ -0.61
CDH5-202ENST00000539168 ATP5EP56381 51 aaPredicted RBP11.24□□□□□ -0.61
CDH5-202ENST00000539168 LRP1Q07954 4544 aaKnown RBP11.22□□□□□ -0.61
CDH5-202ENST00000539168 LOC101927531A0A1B0GV80 90 aa11.21□□□□□ -0.61
CDH5-202ENST00000539168 FAM236DA0A1B0GTK5 79 aa11.2□□□□□ -0.62
CDH5-202ENST00000539168 FAM236CP0DP71 79 aa11.2□□□□□ -0.62
CDH5-202ENST00000539168 KRTAP13-3Q3SY46 172 aa11.2□□□□□ -0.62
CDH5-202ENST00000539168 Q5W150 140 aa11.17□□□□□ -0.62
CDH5-202ENST00000539168 C20orf166-AS1Q96NR2 134 aa11.17□□□□□ -0.62
CDH5-202ENST00000539168 C9orf92A6NGG3 77 aa11.16□□□□□ -0.62
CDH5-202ENST00000539168 KRTAP4-5Q9BYR2 181 aa11.16□□□□□ -0.62
CDH5-202ENST00000539168 A8MUU9 505 aa11.14□□□□□ -0.63
CDH5-202ENST00000539168 DMBT1Q9UGM3 2413 aaPredicted RBP11.12□□□□□ -0.63
CDH5-202ENST00000539168 IGLV7-46A0A075B6I9 117 aa11.12□□□□□ -0.63
CDH5-202ENST00000539168 RPS28P62857 69 aaKnown RBP11.11□□□□□ -0.63
CDH5-202ENST00000539168 SPANXA2-OT1Q8N9U9 137 aa11.11□□□□□ -0.63
CDH5-202ENST00000539168 BIRC6Q9NR09 4857 aa11.08□□□□□ -0.64
CDH5-202ENST00000539168 Q75L30 129 aa11.08□□□□□ -0.64
CDH5-202ENST00000539168 CYP4F30PQ9H0H9 118 aa11.07□□□□□ -0.64
CDH5-202ENST00000539168 IGKV2-30P06310 120 aa11.05□□□□□ -0.64
CDH5-202ENST00000539168 MYCBP2O75592 4640 aa11.02□□□□□ -0.65
CDH5-202ENST00000539168 PCOTHQ58A44 107 aa11.01□□□□□ -0.65
CDH5-202ENST00000539168 J3QL48 77 aa11.01□□□□□ -0.65
CDH5-202ENST00000539168 PRR4Q16378 134 aa11.01□□□□□ -0.65
CDH5-202ENST00000539168 SERP1Q9Y6X1 66 aa11.01□□□□□ -0.65
CDH5-202ENST00000539168 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
CDH5-202ENST00000539168 HERC2O95714 4834 aa10.96□□□□□ -0.66
CDH5-202ENST00000539168 TPRXLQ17RH7 258 aa10.95□□□□□ -0.66
CDH5-202ENST00000539168 IGKV2D-30A0A075B6S6 120 aa10.94□□□□□ -0.66
CDH5-202ENST00000539168 RPL37P61927 97 aaKnown RBP10.92□□□□□ -0.66
CDH5-202ENST00000539168 ATP11AUNQ6ZP68 121 aa10.92□□□□□ -0.66
CDH5-202ENST00000539168 XP32Q5T750 250 aa10.92□□□□□ -0.66
CDH5-202ENST00000539168 SVIPQ8NHG7 77 aa10.91□□□□□ -0.66
CDH5-202ENST00000539168 HRES1P13985 223 aa10.87□□□□□ -0.67
CDH5-202ENST00000539168 ABCA13Q86UQ4 5058 aa10.82□□□□□ -0.68
CDH5-202ENST00000539168 SPINK7P58062 85 aa10.79□□□□□ -0.68
CDH5-202ENST00000539168 DMAC1Q96GE9 116 aa10.77□□□□□ -0.69
CDH5-202ENST00000539168 ACYP2P14621 99 aa10.76□□□□□ -0.69
CDH5-202ENST00000539168 SMIM26A0A096LP01 95 aa10.74□□□□□ -0.69
CDH5-202ENST00000539168 A8MUN3 132 aa10.72□□□□□ -0.69
CDH5-202ENST00000539168 COA5Q86WW8 74 aa10.71□□□□□ -0.69
CDH5-202ENST00000539168 C4orf26Q17RF5 130 aa10.62□□□□□ -0.71
CDH5-202ENST00000539168 SEC61BP60468 96 aaKnown RBP10.6□□□□□ -0.71
CDH5-202ENST00000539168 CHKB-CPT1BH3BT56 60 aa10.58□□□□□ -0.72
CDH5-202ENST00000539168 COX6B2Q6YFQ2 88 aa10.57□□□□□ -0.72
CDH5-202ENST00000539168 V9GYY9 64 aa10.55□□□□□ -0.72
CDH5-202ENST00000539168 Q1T7F1 81 aa10.5□□□□□ -0.73
CDH5-202ENST00000539168 MPLKIPQ8TAP9 179 aa10.45□□□□□ -0.74
CDH5-202ENST00000539168 KRTAP3-1Q9BYR8 98 aa10.44□□□□□ -0.74
CDH5-202ENST00000539168 SPTSSBQ8NFR3 76 aa10.43□□□□□ -0.74
CDH5-202ENST00000539168 LRP2P98164 4655 aa10.4□□□□□ -0.74
CDH5-202ENST00000539168 PCLOQ9Y6V0 5065 aa10.4□□□□□ -0.74
CDH5-202ENST00000539168 RBM12B-AS1Q9P1G2 102 aa10.4□□□□□ -0.74
CDH5-202ENST00000539168 LPAP08519 4548 aa10.39□□□□□ -0.75
CDH5-202ENST00000539168 LINC01558Q9Y6Z2 57 aa10.35□□□□□ -0.75
CDH5-202ENST00000539168 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms