RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 hDV103S1A0JD37 113 aa8.12□□□□□ -1.11
ACTN1-205ENST00000538545 A0A1B0GVX0 72 aa8.12□□□□□ -1.11
ACTN1-205ENST00000538545 H7BZZ5 65 aa8.12□□□□□ -1.11
ACTN1-205ENST00000538545 KRTAP17-1Q9BYP8 105 aa8.12□□□□□ -1.11
ACTN1-205ENST00000538545 PKHD1L1Q86WI1 4243 aa8.12□□□□□ -1.11
ACTN1-205ENST00000538545 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
ACTN1-205ENST00000538545 C8orf17Q9NRJ1 99 aa8.11□□□□□ -1.11
ACTN1-205ENST00000538545 KLKP1Q107X0 134 aa8.11□□□□□ -1.11
ACTN1-205ENST00000538545 RYR1P21817 5038 aa8.1□□□□□ -1.11
ACTN1-205ENST00000538545 CD164Q04900 197 aa8.09□□□□□ -1.11
ACTN1-205ENST00000538545 C1orf195Q5TG92 126 aa8.09□□□□□ -1.11
ACTN1-205ENST00000538545 A0A0U1RQV1 116 aa8.08□□□□□ -1.12
ACTN1-205ENST00000538545 NDUFS5O43920 106 aa8.08□□□□□ -1.12
ACTN1-205ENST00000538545 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
ACTN1-205ENST00000538545 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
ACTN1-205ENST00000538545 LINC00208Q96KT6 92 aa8.04□□□□□ -1.12
ACTN1-205ENST00000538545 C4orf26Q17RF5 130 aa8.03□□□□□ -1.12
ACTN1-205ENST00000538545 PRO0628Q9UI54 55 aa8.03□□□□□ -1.12
ACTN1-205ENST00000538545 TMEM258P61165 79 aa8.02□□□□□ -1.12
ACTN1-205ENST00000538545 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-205ENST00000538545 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
ACTN1-205ENST00000538545 RPS28P62857 69 aaKnown RBP8.02□□□□□ -1.13
ACTN1-205ENST00000538545 ASB16-AS1Q495Z4 193 aa8.02□□□□□ -1.13
ACTN1-205ENST00000538545 H0Y9P7 68 aa8.01□□□□□ -1.13
ACTN1-205ENST00000538545 PRR4Q16378 134 aa8.01□□□□□ -1.13
ACTN1-205ENST00000538545 Q5VSD8 79 aa8.01□□□□□ -1.13
ACTN1-205ENST00000538545 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
ACTN1-205ENST00000538545 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
ACTN1-205ENST00000538545 FAM236DA0A1B0GTK5 79 aa7.98□□□□□ -1.13
ACTN1-205ENST00000538545 OXTP01178 125 aa7.98□□□□□ -1.13
ACTN1-205ENST00000538545 FAM236CP0DP71 79 aa7.98□□□□□ -1.13
ACTN1-205ENST00000538545 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
ACTN1-205ENST00000538545 SPINK1P00995 79 aa7.97□□□□□ -1.13
ACTN1-205ENST00000538545 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
ACTN1-205ENST00000538545 Q5W150 140 aa7.96□□□□□ -1.13
ACTN1-205ENST00000538545 LIMD2Q9BT23 127 aa7.96□□□□□ -1.13
ACTN1-205ENST00000538545 MP68P56378 58 aa7.96□□□□□ -1.14
ACTN1-205ENST00000538545 LINC00313P59037 77 aa7.96□□□□□ -1.14
ACTN1-205ENST00000538545 TNXBP22105 4242 aa7.95□□□□□ -1.14
ACTN1-205ENST00000538545 TRAV22A0A0B4J277 110 aa7.95□□□□□ -1.14
ACTN1-205ENST00000538545 Q5XG85 94 aa7.95□□□□□ -1.14
ACTN1-205ENST00000538545 C1orf64Q8NEQ6 169 aa7.94□□□□□ -1.14
ACTN1-205ENST00000538545 PCOTHQ58A44 107 aa7.92□□□□□ -1.14
ACTN1-205ENST00000538545 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
ACTN1-205ENST00000538545 NDUFC1O43677 76 aa7.9□□□□□ -1.14
ACTN1-205ENST00000538545 Q8N1X5 172 aa7.9□□□□□ -1.14
ACTN1-205ENST00000538545 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
ACTN1-205ENST00000538545 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
ACTN1-205ENST00000538545 C8orf87E5RJ46 101 aa7.87□□□□□ -1.15
ACTN1-205ENST00000538545 TP53AIP1Q9HCN2 124 aa7.87□□□□□ -1.15
ACTN1-205ENST00000538545 SPAG11AQ6PDA7 123 aa7.85□□□□□ -1.15
ACTN1-205ENST00000538545 Q8N9P0 234 aaPredicted RBP7.83□□□□□ -1.16
ACTN1-205ENST00000538545 KRTAP13-3Q3SY46 172 aa7.82□□□□□ -1.16
ACTN1-205ENST00000538545 KRTAP4-5Q9BYR2 181 aa7.82□□□□□ -1.16
ACTN1-205ENST00000538545 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
ACTN1-205ENST00000538545 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
ACTN1-205ENST00000538545 SERP1Q9Y6X1 66 aa7.78□□□□□ -1.16
ACTN1-205ENST00000538545 H3BPC8 53 aa7.78□□□□□ -1.16
ACTN1-205ENST00000538545 ABCA13Q86UQ4 5058 aa7.75□□□□□ -1.17
ACTN1-205ENST00000538545 IGKV2D-30A0A075B6S6 120 aa7.73□□□□□ -1.17
ACTN1-205ENST00000538545 IGKV2-30P06310 120 aa7.73□□□□□ -1.17
ACTN1-205ENST00000538545 CYP4F30PQ9H0H9 118 aa7.73□□□□□ -1.17
ACTN1-205ENST00000538545 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-205ENST00000538545 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
ACTN1-205ENST00000538545 BRK1Q8WUW1 75 aa7.71□□□□□ -1.18
ACTN1-205ENST00000538545 FP248Q71RG6 208 aaPredicted RBP7.7□□□□□ -1.18
ACTN1-205ENST00000538545 LOC101927531A0A1B0GV80 90 aa7.69□□□□□ -1.18
ACTN1-205ENST00000538545 MPLKIPQ8TAP9 179 aa7.69□□□□□ -1.18
ACTN1-205ENST00000538545 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
ACTN1-205ENST00000538545 PMAIP1Q13794 54 aa7.67□□□□□ -1.18
ACTN1-205ENST00000538545 SPANXA2-OT1Q8N9U9 137 aa7.66□□□□□ -1.18
ACTN1-205ENST00000538545 HRES1P13985 223 aa7.66□□□□□ -1.18
ACTN1-205ENST00000538545 LPAP08519 4548 aa7.65□□□□□ -1.18
ACTN1-205ENST00000538545 HERC2O95714 4834 aa7.63□□□□□ -1.19
ACTN1-205ENST00000538545 LRP2P98164 4655 aa7.61□□□□□ -1.19
ACTN1-205ENST00000538545 SMIM26A0A096LP01 95 aa7.6□□□□□ -1.19
ACTN1-205ENST00000538545 COA5Q86WW8 74 aa7.6□□□□□ -1.19
ACTN1-205ENST00000538545 C20orf166-AS1Q96NR2 134 aa7.6□□□□□ -1.19
ACTN1-205ENST00000538545 A8MUU9 505 aa7.6□□□□□ -1.19
ACTN1-205ENST00000538545 H3BS24 57 aa7.59□□□□□ -1.19
ACTN1-205ENST00000538545 BIRC6Q9NR09 4857 aa7.56□□□□□ -1.2
ACTN1-205ENST00000538545 C7orf65Q6ZTY9 151 aa7.52□□□□□ -1.21
ACTN1-205ENST00000538545 XP32Q5T750 250 aa7.51□□□□□ -1.21
ACTN1-205ENST00000538545 PSPHP1O15172 72 aa7.5□□□□□ -1.21
ACTN1-205ENST00000538545 SPINK7P58062 85 aa7.49□□□□□ -1.21
ACTN1-205ENST00000538545 Q75L30 129 aa7.49□□□□□ -1.21
ACTN1-205ENST00000538545 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
ACTN1-205ENST00000538545 ACYP2P14621 99 aa7.45□□□□□ -1.22
ACTN1-205ENST00000538545 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
ACTN1-205ENST00000538545 ATP11AUNQ6ZP68 121 aa7.44□□□□□ -1.22
ACTN1-205ENST00000538545 A8MUN3 132 aa7.43□□□□□ -1.22
ACTN1-205ENST00000538545 RBM12B-AS1Q9P1G2 102 aa7.42□□□□□ -1.22
ACTN1-205ENST00000538545 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
ACTN1-205ENST00000538545 CHKB-CPT1BH3BT56 60 aa7.41□□□□□ -1.22
ACTN1-205ENST00000538545 Q1T7F1 81 aa7.41□□□□□ -1.22
ACTN1-205ENST00000538545 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
ACTN1-205ENST00000538545 J3QL48 77 aa7.39□□□□□ -1.23
ACTN1-205ENST00000538545 HERC1Q15751 4861 aa7.39□□□□□ -1.23
ACTN1-205ENST00000538545 PRR15LQ9BU68 103 aa7.37□□□□□ -1.23
ACTN1-205ENST00000538545 Q5VV11 94 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms