RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 LAMTOR3Q9UHA4 124 aa4.96□□□□□ -1.62
CHD4-204ENST00000535810 PDE6GP18545 87 aa4.94□□□□□ -1.62
CHD4-204ENST00000535810 RBM3P98179 157 aaKnown RBP4.94□□□□□ -1.62
CHD4-204ENST00000535810 C14orf132Q9NPU4 83 aa4.94□□□□□ -1.62
CHD4-204ENST00000535810 SCGB1A1P11684 91 aa4.93□□□□□ -1.62
CHD4-204ENST00000535810 NDUFV3P56181 108 aaKnown RBP4.93□□□□□ -1.62
CHD4-204ENST00000535810 DEFB105AQ8NG35 78 aa4.93□□□□□ -1.62
CHD4-204ENST00000535810 DSCR8Q96T75 97 aa4.93□□□□□ -1.62
CHD4-204ENST00000535810 IGLV5-48A0A075B6I7 105 aa4.92□□□□□ -1.62
CHD4-204ENST00000535810 CCKP06307 115 aa4.92□□□□□ -1.62
CHD4-204ENST00000535810 LINC01547P58512 204 aaPredicted RBP4.92□□□□□ -1.62
CHD4-204ENST00000535810 SMIM29Q86T20 159 aa4.92□□□□□ -1.62
CHD4-204ENST00000535810 SIGMAR1Q99720 223 aa4.92□□□□□ -1.62
CHD4-204ENST00000535810 LOC110117498A0A087WWA1 95 aa4.91□□□□□ -1.62
CHD4-204ENST00000535810 HRCT1Q6UXD1 115 aa4.91□□□□□ -1.62
CHD4-204ENST00000535810 ASB16-AS1Q495Z4 193 aa4.9□□□□□ -1.63
CHD4-204ENST00000535810 LIMD2Q9BT23 127 aa4.9□□□□□ -1.63
CHD4-204ENST00000535810 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
CHD4-204ENST00000535810 CD164Q04900 197 aa4.89□□□□□ -1.63
CHD4-204ENST00000535810 F8WEM9 126 aa4.88□□□□□ -1.63
CHD4-204ENST00000535810 Q6ZQT0 140 aa4.88□□□□□ -1.63
CHD4-204ENST00000535810 A0A0G2JQZ4 141 aa4.87□□□□□ -1.63
CHD4-204ENST00000535810 TRBV7-4A0A0J9YYF1 115 aa4.87□□□□□ -1.63
CHD4-204ENST00000535810 SEC61BP60468 96 aaKnown RBP4.87□□□□□ -1.63
CHD4-204ENST00000535810 LINC00643Q86TS7 51 aa4.87□□□□□ -1.63
CHD4-204ENST00000535810 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
CHD4-204ENST00000535810 Q5XG85 94 aa4.86□□□□□ -1.63
CHD4-204ENST00000535810 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
CHD4-204ENST00000535810 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
CHD4-204ENST00000535810 UBL5Q9BZL1 73 aa4.85□□□□□ -1.63
CHD4-204ENST00000535810 A0A1B0GW54 56 aa4.84□□□□□ -1.63
CHD4-204ENST00000535810 MT-ATP8P03928 68 aa4.84□□□□□ -1.63
CHD4-204ENST00000535810 LINC00846Q9NV44 126 aa4.84□□□□□ -1.63
CHD4-204ENST00000535810 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
CHD4-204ENST00000535810 Q6JHZ5 121 aa4.83□□□□□ -1.64
CHD4-204ENST00000535810 C9orf92A6NGG3 77 aa4.82□□□□□ -1.64
CHD4-204ENST00000535810 ATP5EP2Q5VTU8 51 aa4.82□□□□□ -1.64
CHD4-204ENST00000535810 Q6Q795 121 aa4.82□□□□□ -1.64
CHD4-204ENST00000535810 IMUPQ9GZP8 106 aa4.82□□□□□ -1.64
CHD4-204ENST00000535810 IGLV8-61A0A075B6I0 122 aa4.81□□□□□ -1.64
CHD4-204ENST00000535810 TRBV7-7A0A0K0K1E9 115 aa4.81□□□□□ -1.64
CHD4-204ENST00000535810 V9GYY9 64 aa4.81□□□□□ -1.64
CHD4-204ENST00000535810 IGFL1Q6UW32 110 aa4.79□□□□□ -1.64
CHD4-204ENST00000535810 Q6ZVQ6 151 aa4.79□□□□□ -1.64
CHD4-204ENST00000535810 IGKV3D-7A0A0C4DH55 119 aa4.78□□□□□ -1.64
CHD4-204ENST00000535810 NREPQ16612 68 aa4.78□□□□□ -1.64
CHD4-204ENST00000535810 PCOTHQ58A44 107 aa4.78□□□□□ -1.64
CHD4-204ENST00000535810 A0A1W2PNM2 257 aa4.77□□□□□ -1.65
CHD4-204ENST00000535810 CXCL6P80162 114 aa4.76□□□□□ -1.65
CHD4-204ENST00000535810 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
CHD4-204ENST00000535810 HIST1H4AP62805 103 aaKnown RBP4.74□□□□□ -1.65
CHD4-204ENST00000535810 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
CHD4-204ENST00000535810 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
CHD4-204ENST00000535810 FAM236AA0A1B0GUQ0 79 aa4.72□□□□□ -1.65
CHD4-204ENST00000535810 FAM236BA0A1B0GV22 79 aa4.72□□□□□ -1.65
CHD4-204ENST00000535810 BPY2O14599 106 aa4.72□□□□□ -1.65
CHD4-204ENST00000535810 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
CHD4-204ENST00000535810 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
CHD4-204ENST00000535810 ANAPC13Q9BS18 74 aa4.71□□□□□ -1.66
CHD4-204ENST00000535810 A0A087WSZ3 146 aa4.7□□□□□ -1.66
CHD4-204ENST00000535810 SS18L2Q9UHA2 77 aa4.7□□□□□ -1.66
CHD4-204ENST00000535810 ATOX1O00244 68 aa4.69□□□□□ -1.66
CHD4-204ENST00000535810 A0A087WVE0 104 aa4.68□□□□□ -1.66
CHD4-204ENST00000535810 J3KT08 172 aa4.67□□□□□ -1.66
CHD4-204ENST00000535810 MT1HP80294 61 aa4.67□□□□□ -1.66
CHD4-204ENST00000535810 Q75L30 129 aa4.67□□□□□ -1.66
CHD4-204ENST00000535810 IGKV4-1P06312 121 aa4.65□□□□□ -1.67
CHD4-204ENST00000535810 Q96NJ1 140 aa4.65□□□□□ -1.67
CHD4-204ENST00000535810 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
CHD4-204ENST00000535810 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
CHD4-204ENST00000535810 NDUFB1O75438 58 aa4.63□□□□□ -1.67
CHD4-204ENST00000535810 DSCR10P59022 87 aa4.63□□□□□ -1.67
CHD4-204ENST00000535810 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
CHD4-204ENST00000535810 Q8N9L7 120 aa4.63□□□□□ -1.67
CHD4-204ENST00000535810 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
CHD4-204ENST00000535810 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
CHD4-204ENST00000535810 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
CHD4-204ENST00000535810 A8MWP4 228 aa4.61□□□□□ -1.67
CHD4-204ENST00000535810 K7EQZ3 153 aa4.61□□□□□ -1.67
CHD4-204ENST00000535810 DEFB116Q30KQ4 102 aa4.61□□□□□ -1.67
CHD4-204ENST00000535810 COX6B2Q6YFQ2 88 aa4.61□□□□□ -1.67
CHD4-204ENST00000535810 SERP2Q8N6R1 65 aa4.61□□□□□ -1.67
CHD4-204ENST00000535810 A8MUU9 505 aa4.6□□□□□ -1.67
CHD4-204ENST00000535810 COX7CP15954 63 aa4.6□□□□□ -1.67
CHD4-204ENST00000535810 TRAV7A0A075B6U4 112 aa4.59□□□□□ -1.67
CHD4-204ENST00000535810 HCG22E2RYF7 251 aa4.59□□□□□ -1.67
CHD4-204ENST00000535810 UQCRQO14949 82 aa4.59□□□□□ -1.67
CHD4-204ENST00000535810 PRR15Q8IV56 129 aa4.59□□□□□ -1.67
CHD4-204ENST00000535810 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
CHD4-204ENST00000535810 SSPOA2VEC9 5147 aa4.57□□□□□ -1.68
CHD4-204ENST00000535810 A0A1B0GVX0 72 aa4.56□□□□□ -1.68
CHD4-204ENST00000535810 KRTAP16-1A8MUX0 517 aa4.56□□□□□ -1.68
CHD4-204ENST00000535810 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
CHD4-204ENST00000535810 M0R2T5 61 aa4.56□□□□□ -1.68
CHD4-204ENST00000535810 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
CHD4-204ENST00000535810 CASC2Q6XLA1 102 aa4.56□□□□□ -1.68
CHD4-204ENST00000535810 USH2AO75445 5202 aa4.56□□□□□ -1.68
CHD4-204ENST00000535810 LINC00313P59037 77 aa4.55□□□□□ -1.68
CHD4-204ENST00000535810 NOTCH2NLQ7Z3S9 236 aa4.55□□□□□ -1.68
CHD4-204ENST00000535810 WFDC13Q8IUB5 93 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms