RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 LINC01600Q96MT4 127 aa9.18□□□□□ -0.94
PPFIA1-222ENST00000532504 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
PPFIA1-222ENST00000532504 FP248Q71RG6 208 aaPredicted RBP9.14□□□□□ -0.95
PPFIA1-222ENST00000532504 SPINK7P58062 85 aa9.14□□□□□ -0.95
PPFIA1-222ENST00000532504 KLKP1Q107X0 134 aa9.13□□□□□ -0.95
PPFIA1-222ENST00000532504 Q8N9P0 234 aaPredicted RBP9.12□□□□□ -0.95
PPFIA1-222ENST00000532504 BSNQ9UPA5 3926 aa9.12□□□□□ -0.95
PPFIA1-222ENST00000532504 OCR1Q9BZK8 76 aa9.12□□□□□ -0.95
PPFIA1-222ENST00000532504 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
PPFIA1-222ENST00000532504 HRES1P13985 223 aa9.1□□□□□ -0.95
PPFIA1-222ENST00000532504 ANK3Q12955 4377 aaKnown RBP9.09□□□□□ -0.96
PPFIA1-222ENST00000532504 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
PPFIA1-222ENST00000532504 PMAIP1Q13794 54 aa9.06□□□□□ -0.96
PPFIA1-222ENST00000532504 Q5W150 140 aa9.06□□□□□ -0.96
PPFIA1-222ENST00000532504 H7BZZ5 65 aa9.05□□□□□ -0.96
PPFIA1-222ENST00000532504 CYP4F30PQ9H0H9 118 aa9.01□□□□□ -0.97
PPFIA1-222ENST00000532504 A0A0D9SG42 100 aa9□□□□□ -0.97
PPFIA1-222ENST00000532504 A8MUN3 132 aa9□□□□□ -0.97
PPFIA1-222ENST00000532504 NOTCH2NLQ7Z3S9 236 aa8.98□□□□□ -0.97
PPFIA1-222ENST00000532504 CUBNO60494 3623 aa8.98□□□□□ -0.97
PPFIA1-222ENST00000532504 CSAG1Q6PB30 78 aa8.97□□□□□ -0.97
PPFIA1-222ENST00000532504 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.97
PPFIA1-222ENST00000532504 S4R3F8 94 aa8.96□□□□□ -0.98
PPFIA1-222ENST00000532504 UQCR11O14957 56 aa8.95□□□□□ -0.98
PPFIA1-222ENST00000532504 SPINT4Q6UDR6 99 aa8.93□□□□□ -0.98
PPFIA1-222ENST00000532504 TRRAPQ9Y4A5 3859 aa8.93□□□□□ -0.98
PPFIA1-222ENST00000532504 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
PPFIA1-222ENST00000532504 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
PPFIA1-222ENST00000532504 MIR22HGQ0VDD5 57 aa8.86□□□□□ -0.99
PPFIA1-222ENST00000532504 ASB16-AS1Q495Z4 193 aa8.85□□□□□ -0.99
PPFIA1-222ENST00000532504 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
PPFIA1-222ENST00000532504 A0A1B0GVY2 172 aa8.83□□□□□ -1
PPFIA1-222ENST00000532504 SRRM2Q9UQ35 2752 aaKnown RBP8.8□□□□□ -1
PPFIA1-222ENST00000532504 FBN3Q75N90 2809 aa8.8□□□□□ -1
PPFIA1-222ENST00000532504 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
PPFIA1-222ENST00000532504 Q5XG85 94 aa8.77□□□□□ -1
PPFIA1-222ENST00000532504 CAMK2N1Q7Z7J9 78 aa8.77□□□□□ -1.01
PPFIA1-222ENST00000532504 RPL37P61927 97 aaKnown RBP8.74□□□□□ -1.01
PPFIA1-222ENST00000532504 Q75L30 129 aa8.74□□□□□ -1.01
PPFIA1-222ENST00000532504 A0A1B0GU33 70 aa8.73□□□□□ -1.01
PPFIA1-222ENST00000532504 R4GN34 69 aa8.73□□□□□ -1.01
PPFIA1-222ENST00000532504 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
PPFIA1-222ENST00000532504 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
PPFIA1-222ENST00000532504 CRIPTQ9P021 101 aa8.62□□□□□ -1.03
PPFIA1-222ENST00000532504 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
PPFIA1-222ENST00000532504 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
PPFIA1-222ENST00000532504 M0QZ58 72 aa8.59□□□□□ -1.03
PPFIA1-222ENST00000532504 XP32Q5T750 250 aa8.58□□□□□ -1.04
PPFIA1-222ENST00000532504 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
PPFIA1-222ENST00000532504 C20orf166-AS1Q96NR2 134 aa8.57□□□□□ -1.04
PPFIA1-222ENST00000532504 LCA10Q71F78 164 aa8.56□□□□□ -1.04
PPFIA1-222ENST00000532504 VPS13CQ709C8 3753 aa8.55□□□□□ -1.04
PPFIA1-222ENST00000532504 CDC42SE1Q9NRR8 79 aa8.55□□□□□ -1.04
PPFIA1-222ENST00000532504 COL7A1Q02388 2944 aa8.54□□□□□ -1.04
PPFIA1-222ENST00000532504 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
PPFIA1-222ENST00000532504 A8MUU9 505 aa8.53□□□□□ -1.04
PPFIA1-222ENST00000532504 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
PPFIA1-222ENST00000532504 Q1T7F1 81 aa8.48□□□□□ -1.05
PPFIA1-222ENST00000532504 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
PPFIA1-222ENST00000532504 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
PPFIA1-222ENST00000532504 AKAP9Q99996 3911 aa8.47□□□□□ -1.05
PPFIA1-222ENST00000532504 PLAC4Q8WY50 150 aa8.41□□□□□ -1.06
PPFIA1-222ENST00000532504 MEGF8Q7Z7M0 2845 aa8.41□□□□□ -1.06
PPFIA1-222ENST00000532504 KRTAP13-3Q3SY46 172 aa8.39□□□□□ -1.07
PPFIA1-222ENST00000532504 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
PPFIA1-222ENST00000532504 HUWE1Q7Z6Z7 4374 aaKnown RBP8.35□□□□□ -1.07
PPFIA1-222ENST00000532504 Q5VV11 94 aa8.29□□□□□ -1.08
PPFIA1-222ENST00000532504 DNHD1Q96M86 4753 aa8.28□□□□□ -1.08
PPFIA1-222ENST00000532504 KRTAP16-1A8MUX0 517 aa8.24□□□□□ -1.09
PPFIA1-222ENST00000532504 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
PPFIA1-222ENST00000532504 A8MU10 97 aa8.13□□□□□ -1.11
PPFIA1-222ENST00000532504 DNAH9Q9NYC9 4486 aa8.12□□□□□ -1.11
PPFIA1-222ENST00000532504 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
PPFIA1-222ENST00000532504 KTN1-AS1Q86SY8 53 aa8.1□□□□□ -1.11
PPFIA1-222ENST00000532504 MT1HL1P0DM35 61 aa8.04□□□□□ -1.12
PPFIA1-222ENST00000532504 ROMO1P60602 79 aa8.02□□□□□ -1.13
PPFIA1-222ENST00000532504 PRAC1Q96KF2 57 aa8□□□□□ -1.13
PPFIA1-222ENST00000532504 CSMD3Q7Z407 3707 aa7.95□□□□□ -1.14
PPFIA1-222ENST00000532504 KRTAP10-4P60372 401 aaPredicted RBP7.93□□□□□ -1.14
PPFIA1-222ENST00000532504 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
PPFIA1-222ENST00000532504 LUZP6Q538Z0 58 aa7.87□□□□□ -1.15
PPFIA1-222ENST00000532504 PLECQ15149 4684 aaKnown RBP7.86□□□□□ -1.15
PPFIA1-222ENST00000532504 DNAH5Q8TE73 4624 aa7.83□□□□□ -1.16
PPFIA1-222ENST00000532504 P0C880 135 aa7.81□□□□□ -1.16
PPFIA1-222ENST00000532504 TNP1P09430 55 aa7.77□□□□□ -1.17
PPFIA1-222ENST00000532504 PRKDCP78527 4128 aaKnown RBP7.75□□□□□ -1.17
PPFIA1-222ENST00000532504 DNAH1Q9P2D7 4330 aa7.7□□□□□ -1.18
PPFIA1-222ENST00000532504 ANK2Q01484 3957 aa7.69□□□□□ -1.18
PPFIA1-222ENST00000532504 STARD9Q9P2P6 4700 aa7.68□□□□□ -1.18
PPFIA1-222ENST00000532504 DNAH11Q96DT5 4516 aa7.65□□□□□ -1.18
PPFIA1-222ENST00000532504 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
PPFIA1-222ENST00000532504 H0YAA0 97 aa7.61□□□□□ -1.19
PPFIA1-222ENST00000532504 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
PPFIA1-222ENST00000532504 VPS13DQ5THJ4 4388 aa7.6□□□□□ -1.19
PPFIA1-222ENST00000532504 DYNC1H1Q14204 4646 aaKnown RBP7.58□□□□□ -1.2
PPFIA1-222ENST00000532504 FAT1Q14517 4588 aa7.51□□□□□ -1.21
PPFIA1-222ENST00000532504 DNAH10Q8IVF4 4471 aa7.5□□□□□ -1.21
PPFIA1-222ENST00000532504 LRP1BQ9NZR2 4599 aa7.5□□□□□ -1.21
PPFIA1-222ENST00000532504 RYR1P21817 5038 aa7.49□□□□□ -1.21
PPFIA1-222ENST00000532504 A6NN06 94 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms