RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 KMT2BQ9UMN6 2715 aaPredicted RBP4.55□□□□□ -1.68
CTNND1-221ENST00000529873 ITPR2Q14571 2701 aa4.55□□□□□ -1.68
CTNND1-221ENST00000529873 UTP20O75691 2785 aaKnown RBP4.55□□□□□ -1.68
CTNND1-221ENST00000529873 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
CTNND1-221ENST00000529873 FRYLO94915 3013 aa4.54□□□□□ -1.68
CTNND1-221ENST00000529873 FREM2Q5SZK8 3169 aa4.53□□□□□ -1.68
CTNND1-221ENST00000529873 STAB1Q9NY15 2570 aa4.53□□□□□ -1.68
CTNND1-221ENST00000529873 ADGRG4Q8IZF6 3080 aa4.53□□□□□ -1.68
CTNND1-221ENST00000529873 KALRNO60229 2985 aa4.52□□□□□ -1.69
CTNND1-221ENST00000529873 MAP1AP78559 2803 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-221ENST00000529873 COL12A1Q99715 3063 aa4.52□□□□□ -1.69
CTNND1-221ENST00000529873 NBEAL2Q6ZNJ1 2754 aa4.51□□□□□ -1.69
CTNND1-221ENST00000529873 FLNCQ14315 2725 aa4.51□□□□□ -1.69
CTNND1-221ENST00000529873 STAB2Q8WWQ8 2551 aa4.51□□□□□ -1.69
CTNND1-221ENST00000529873 DMXL1Q9Y485 3027 aa4.51□□□□□ -1.69
CTNND1-221ENST00000529873 ITPR1Q14643 2758 aa4.5□□□□□ -1.69
CTNND1-221ENST00000529873 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
CTNND1-221ENST00000529873 TPRXLQ17RH7 258 aa4.48□□□□□ -1.69
CTNND1-221ENST00000529873 SPEGQ15772 3267 aa4.48□□□□□ -1.69
CTNND1-221ENST00000529873 NOTCH1P46531 2555 aa4.47□□□□□ -1.69
CTNND1-221ENST00000529873 APCP25054 2843 aa4.47□□□□□ -1.69
CTNND1-221ENST00000529873 A0A1B0GVY2 172 aa4.46□□□□□ -1.69
CTNND1-221ENST00000529873 UBR5O95071 2799 aaPredicted RBP4.46□□□□□ -1.7
CTNND1-221ENST00000529873 NBEAL1Q6ZS30 2694 aa4.45□□□□□ -1.7
CTNND1-221ENST00000529873 NBEAQ8NFP9 2946 aa4.44□□□□□ -1.7
CTNND1-221ENST00000529873 HIVEP1P15822 2718 aa4.44□□□□□ -1.7
CTNND1-221ENST00000529873 HRNRQ86YZ3 2850 aaPredicted RBP4.44□□□□□ -1.7
CTNND1-221ENST00000529873 H0YAA0 97 aa4.44□□□□□ -1.7
CTNND1-221ENST00000529873 NSD1Q96L73 2696 aaPredicted RBP4.42□□□□□ -1.7
CTNND1-221ENST00000529873 MYO15AQ9UKN7 3530 aa4.42□□□□□ -1.7
CTNND1-221ENST00000529873 TACC2O95359 2948 aa4.4□□□□□ -1.7
CTNND1-221ENST00000529873 ZZEF1O43149 2961 aa4.4□□□□□ -1.7
CTNND1-221ENST00000529873 LOC400499M0QZD8 3231 aa4.39□□□□□ -1.71
CTNND1-221ENST00000529873 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
CTNND1-221ENST00000529873 KRTAP13-3Q3SY46 172 aa4.39□□□□□ -1.71
CTNND1-221ENST00000529873 CFAP47Q6ZTR5 3102 aa4.38□□□□□ -1.71
CTNND1-221ENST00000529873 INE1O15225 51 aa4.36□□□□□ -1.71
CTNND1-221ENST00000529873 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
CTNND1-221ENST00000529873 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
CTNND1-221ENST00000529873 ZANQ9Y493 2812 aa4.3□□□□□ -1.72
CTNND1-221ENST00000529873 WDFY3Q8IZQ1 3526 aa4.29□□□□□ -1.72
CTNND1-221ENST00000529873 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
CTNND1-221ENST00000529873 ASPMQ8IZT6 3477 aa4.28□□□□□ -1.72
CTNND1-221ENST00000529873 CRYBG3Q68DQ2 2970 aa4.28□□□□□ -1.72
CTNND1-221ENST00000529873 TENM4Q6N022 2769 aa4.27□□□□□ -1.73
CTNND1-221ENST00000529873 CELSR2Q9HCU4 2923 aa4.27□□□□□ -1.73
CTNND1-221ENST00000529873 NIPBLQ6KC79 2804 aaeCLIP4.26□□□□□ -1.731e-6■□□□□ 9
CTNND1-221ENST00000529873 RELNP78509 3460 aa4.25□□□□□ -1.73
CTNND1-221ENST00000529873 FBN2P35556 2912 aa4.25□□□□□ -1.73
CTNND1-221ENST00000529873 DMDP11532 3685 aa4.25□□□□□ -1.73
CTNND1-221ENST00000529873 ASH1LQ9NR48 2969 aaKnown RBP4.23□□□□□ -1.73
CTNND1-221ENST00000529873 DCHS2Q6V1P9 2916 aa4.21□□□□□ -1.74
CTNND1-221ENST00000529873 LAMA5O15230 3695 aa4.21□□□□□ -1.74
CTNND1-221ENST00000529873 ZFHX4Q86UP3 3567 aa4.2□□□□□ -1.74
CTNND1-221ENST00000529873 PDZD2O15018 2839 aa4.19□□□□□ -1.74
CTNND1-221ENST00000529873 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
CTNND1-221ENST00000529873 ANK3Q12955 4377 aaKnown RBP4.17□□□□□ -1.74
CTNND1-221ENST00000529873 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
CTNND1-221ENST00000529873 NBPF19A0A087WUL8 3843 aa4.16□□□□□ -1.74
CTNND1-221ENST00000529873 MXRA5Q9NR99 2828 aa4.13□□□□□ -1.75
CTNND1-221ENST00000529873 NF1P21359 2839 aa4.13□□□□□ -1.75
CTNND1-221ENST00000529873 CELSR1Q9NYQ6 3014 aa4.1□□□□□ -1.75
CTNND1-221ENST00000529873 DCHS1Q96JQ0 3298 aa4.1□□□□□ -1.75
CTNND1-221ENST00000529873 SMG1Q96Q15 3661 aaKnown RBP4.09□□□□□ -1.75
CTNND1-221ENST00000529873 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
CTNND1-221ENST00000529873 MUC3AQ02505 3323 aa4.08□□□□□ -1.76
CTNND1-221ENST00000529873 BSNQ9UPA5 3926 aa4.08□□□□□ -1.76
CTNND1-221ENST00000529873 CSMD1Q96PZ7 3565 aa4.07□□□□□ -1.76
CTNND1-221ENST00000529873 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
CTNND1-221ENST00000529873 OTOGQ6ZRI0 2925 aa4.04□□□□□ -1.76
CTNND1-221ENST00000529873 TENM2Q9NT68 2774 aa4.03□□□□□ -1.76
CTNND1-221ENST00000529873 TENM3Q9P273 2699 aa4.02□□□□□ -1.77
CTNND1-221ENST00000529873 SPENQ96T58 3664 aaKnown RBP4.02□□□□□ -1.77
CTNND1-221ENST00000529873 ALMS1Q8TCU4 4167 aa4□□□□□ -1.77
CTNND1-221ENST00000529873 TENM1Q9UKZ4 2725 aa3.96□□□□□ -1.78
CTNND1-221ENST00000529873 SVEP1Q4LDE5 3571 aa3.95□□□□□ -1.78
CTNND1-221ENST00000529873 FBN1P35555 2871 aaKnown RBP3.94□□□□□ -1.78
CTNND1-221ENST00000529873 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
CTNND1-221ENST00000529873 HUWE1Q7Z6Z7 4374 aaKnown RBP3.91□□□□□ -1.78
CTNND1-221ENST00000529873 ZFHX3Q15911 3703 aa3.89□□□□□ -1.79
CTNND1-221ENST00000529873 CSMD2Q7Z408 3487 aa3.89□□□□□ -1.79
CTNND1-221ENST00000529873 VWFP04275 2813 aa3.88□□□□□ -1.79
CTNND1-221ENST00000529873 MT1HL1P0DM35 61 aa3.86□□□□□ -1.79
CTNND1-221ENST00000529873 TRRAPQ9Y4A5 3859 aa3.86□□□□□ -1.79
CTNND1-221ENST00000529873 TGP01266 2768 aa3.84□□□□□ -1.79
CTNND1-221ENST00000529873 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
CTNND1-221ENST00000529873 KRTAP3-3Q9BYR6 98 aa3.8□□□□□ -1.8
CTNND1-221ENST00000529873 PKD1L1Q8TDX9 2849 aa3.79□□□□□ -1.8
CTNND1-221ENST00000529873 VPS13CQ709C8 3753 aa3.79□□□□□ -1.8
CTNND1-221ENST00000529873 AKAP9Q99996 3911 aa3.79□□□□□ -1.8
CTNND1-221ENST00000529873 KRTAP3-2Q9BYR7 98 aa3.79□□□□□ -1.8
CTNND1-221ENST00000529873 KRTAP10-4P60372 401 aaPredicted RBP3.77□□□□□ -1.81
CTNND1-221ENST00000529873 DNAH9Q9NYC9 4486 aa3.72□□□□□ -1.81
CTNND1-221ENST00000529873 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
CTNND1-221ENST00000529873 KRTAP4-5Q9BYR2 181 aa3.71□□□□□ -1.82
CTNND1-221ENST00000529873 CUBNO60494 3623 aa3.71□□□□□ -1.82
CTNND1-221ENST00000529873 ZNF469Q96JG9 3925 aaPredicted RBP3.7□□□□□ -1.82
CTNND1-221ENST00000529873 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
CTNND1-221ENST00000529873 MEGF8Q7Z7M0 2845 aa3.66□□□□□ -1.82
CTNND1-221ENST00000529873 FBN3Q75N90 2809 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms