RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 LCE6AA0A183 80 aa6.07□□□□□ -1.44
USP35-201ENST00000526425 KRTAP4-16G5E9R7 235 aaPredicted RBP6.07□□□□□ -1.44
USP35-201ENST00000526425 CMYA5Q8N3K9 4069 aa6.06□□□□□ -1.44
USP35-201ENST00000526425 TNP2Q05952 138 aa6.06□□□□□ -1.44
USP35-201ENST00000526425 DNHD1Q96M86 4753 aa6.06□□□□□ -1.44
USP35-201ENST00000526425 PSORS1C2Q9UIG4 136 aa6.05□□□□□ -1.44
USP35-201ENST00000526425 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
USP35-201ENST00000526425 HRES1P13985 223 aa6.04□□□□□ -1.44
USP35-201ENST00000526425 IGLV7-46A0A075B6I9 117 aa6.03□□□□□ -1.44
USP35-201ENST00000526425 Q6ZRN7 208 aaPredicted RBP6.03□□□□□ -1.44
USP35-201ENST00000526425 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.45
USP35-201ENST00000526425 DNAH3Q8TD57 4116 aa6.02□□□□□ -1.45
USP35-201ENST00000526425 ROMO1P60602 79 aa6.01□□□□□ -1.45
USP35-201ENST00000526425 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
USP35-201ENST00000526425 SPINT4Q6UDR6 99 aa5.98□□□□□ -1.45
USP35-201ENST00000526425 H3BPC8 53 aa5.97□□□□□ -1.45
USP35-201ENST00000526425 SPRR4Q96PI1 79 aa5.97□□□□□ -1.45
USP35-201ENST00000526425 SSBP3-AS1Q7Z2R9 100 aa5.96□□□□□ -1.45
USP35-201ENST00000526425 UQCR11O14957 56 aa5.96□□□□□ -1.46
USP35-201ENST00000526425 SPINK1P00995 79 aa5.96□□□□□ -1.46
USP35-201ENST00000526425 ZNF861PO60384 105 aa5.95□□□□□ -1.46
USP35-201ENST00000526425 KRTAP10-2P60368 255 aa5.95□□□□□ -1.46
USP35-201ENST00000526425 A0A1B0GW54 56 aa5.94□□□□□ -1.46
USP35-201ENST00000526425 PRKDCP78527 4128 aaKnown RBP5.94□□□□□ -1.46
USP35-201ENST00000526425 A8MWP4 228 aa5.93□□□□□ -1.46
USP35-201ENST00000526425 SMR3BP02814 79 aaPredicted RBP5.93□□□□□ -1.46
USP35-201ENST00000526425 DNAH10Q8IVF4 4471 aa5.93□□□□□ -1.46
USP35-201ENST00000526425 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
USP35-201ENST00000526425 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
USP35-201ENST00000526425 LYSTQ99698 3801 aa5.9□□□□□ -1.47
USP35-201ENST00000526425 PLECQ15149 4684 aaKnown RBP5.89□□□□□ -1.47
USP35-201ENST00000526425 ACYP2P14621 99 aa5.88□□□□□ -1.47
USP35-201ENST00000526425 PLAC8Q9NZF1 115 aa5.88□□□□□ -1.47
USP35-201ENST00000526425 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
USP35-201ENST00000526425 KRTAP10-1P60331 282 aa5.86□□□□□ -1.47
USP35-201ENST00000526425 KRTAP16-1A8MUX0 517 aa5.86□□□□□ -1.47
USP35-201ENST00000526425 SPRR1BP22528 89 aa5.85□□□□□ -1.47
USP35-201ENST00000526425 LINC00472Q9H8W2 130 aa5.84□□□□□ -1.47
USP35-201ENST00000526425 C8orf17Q9NRJ1 99 aa5.84□□□□□ -1.47
USP35-201ENST00000526425 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
USP35-201ENST00000526425 STARD9Q9P2P6 4700 aa5.83□□□□□ -1.48
USP35-201ENST00000526425 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
USP35-201ENST00000526425 P0C880 135 aa5.82□□□□□ -1.48
USP35-201ENST00000526425 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
USP35-201ENST00000526425 KRTAP13-1Q8IUC0 172 aa5.81□□□□□ -1.48
USP35-201ENST00000526425 TYMSOSQ8TAI1 123 aa5.8□□□□□ -1.48
USP35-201ENST00000526425 MMP24-AS1A0A0U1RRL7 71 aa5.8□□□□□ -1.48
USP35-201ENST00000526425 A8MUU9 505 aa5.8□□□□□ -1.48
USP35-201ENST00000526425 A0A087X002 238 aa5.79□□□□□ -1.48
USP35-201ENST00000526425 NOTCH2NLQ7Z3S9 236 aa5.79□□□□□ -1.48
USP35-201ENST00000526425 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
USP35-201ENST00000526425 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
USP35-201ENST00000526425 ASB16-AS1Q495Z4 193 aa5.77□□□□□ -1.49
USP35-201ENST00000526425 IGKV2D-30A0A075B6S6 120 aa5.77□□□□□ -1.49
USP35-201ENST00000526425 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
USP35-201ENST00000526425 VPS13DQ5THJ4 4388 aa5.74□□□□□ -1.49
USP35-201ENST00000526425 LINC00483Q53H64 154 aa5.73□□□□□ -1.49
USP35-201ENST00000526425 DNAH7Q8WXX0 4024 aa5.73□□□□□ -1.49
USP35-201ENST00000526425 Q96NJ1 140 aa5.71□□□□□ -1.5
USP35-201ENST00000526425 DNAH1Q9P2D7 4330 aa5.71□□□□□ -1.5
USP35-201ENST00000526425 C9orf92A6NGG3 77 aa5.7□□□□□ -1.5
USP35-201ENST00000526425 Q6ZSA8 131 aa5.7□□□□□ -1.5
USP35-201ENST00000526425 KMT2AQ03164 3969 aa5.7□□□□□ -1.5
USP35-201ENST00000526425 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
USP35-201ENST00000526425 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
USP35-201ENST00000526425 DYNC2H1Q8NCM8 4307 aaKnown RBP5.69□□□□□ -1.5
USP35-201ENST00000526425 K7ERS5 55 aa5.68□□□□□ -1.5
USP35-201ENST00000526425 Q5W150 140 aa5.68□□□□□ -1.5
USP35-201ENST00000526425 KRTAP13-2Q52LG2 175 aa5.67□□□□□ -1.5
USP35-201ENST00000526425 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
USP35-201ENST00000526425 FAM229AH3BQW9 127 aa5.66□□□□□ -1.5
USP35-201ENST00000526425 DMAC1Q96GE9 116 aa5.64□□□□□ -1.51
USP35-201ENST00000526425 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
USP35-201ENST00000526425 Q8N1X5 172 aa5.6□□□□□ -1.51
USP35-201ENST00000526425 DNAH2Q9P225 4427 aa5.59□□□□□ -1.51
USP35-201ENST00000526425 ALMS1Q8TCU4 4167 aa5.58□□□□□ -1.52
USP35-201ENST00000526425 A0A1B0GVY2 172 aa5.57□□□□□ -1.52
USP35-201ENST00000526425 DNAH17Q9UFH2 4485 aa5.56□□□□□ -1.52
USP35-201ENST00000526425 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
USP35-201ENST00000526425 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
USP35-201ENST00000526425 A0A0D9SG42 100 aa5.54□□□□□ -1.52
USP35-201ENST00000526425 A0A1B0GU33 70 aa5.53□□□□□ -1.52
USP35-201ENST00000526425 Q5VSD8 79 aa5.52□□□□□ -1.53
USP35-201ENST00000526425 HYDINQ4G0P3 5121 aa5.51□□□□□ -1.53
USP35-201ENST00000526425 FRAS1Q86XX4 4008 aa5.5□□□□□ -1.53
USP35-201ENST00000526425 H0YAA0 97 aa5.49□□□□□ -1.53
USP35-201ENST00000526425 DNAH6Q9C0G6 4158 aa5.49□□□□□ -1.53
USP35-201ENST00000526425 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
USP35-201ENST00000526425 SACSQ9NZJ4 4579 aa5.48□□□□□ -1.53
USP35-201ENST00000526425 DNAH5Q8TE73 4624 aa5.47□□□□□ -1.53
USP35-201ENST00000526425 DNAH8Q96JB1 4490 aa5.46□□□□□ -1.53
USP35-201ENST00000526425 J3QL48 77 aa5.45□□□□□ -1.54
USP35-201ENST00000526425 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
USP35-201ENST00000526425 SEC61BP60468 96 aaKnown RBP5.43□□□□□ -1.54
USP35-201ENST00000526425 DYNC1H1Q14204 4646 aaKnown RBP5.41□□□□□ -1.54
USP35-201ENST00000526425 KMT2CQ8NEZ4 4911 aaKnown RBP5.4□□□□□ -1.54
USP35-201ENST00000526425 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
USP35-201ENST00000526425 FAT1Q14517 4588 aa5.39□□□□□ -1.55
USP35-201ENST00000526425 PKHD1P08F94 4074 aa5.39□□□□□ -1.55
USP35-201ENST00000526425 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms