RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 hADV29S1A0JD25 119 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 H3BUT2 72 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 TAX1BP3O14907 124 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
USP48-211ENST00000526044 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 LINC00575Q6W349 94 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 KRTAP13-1Q8IUC0 172 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 Q9BRP9 147 aa2.64□□□□□ -1.99
USP48-211ENST00000526044 ERC2-IT1O76042 136 aa2.63□□□□□ -1.99
USP48-211ENST00000526044 LCA10Q71F78 164 aa2.63□□□□□ -1.99
USP48-211ENST00000526044 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
USP48-211ENST00000526044 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
USP48-211ENST00000526044 DEFB105AQ8NG35 78 aa2.63□□□□□ -1.99
USP48-211ENST00000526044 TRBV20-1A0A075B6N2 111 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 FABP2P12104 132 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 ATXN8Q156A1 80 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 PRR15Q8IV56 129 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 ST20-AS1Q8NBB2 130 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 CLEC2BQ92478 149 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 FAT1Q14517 4588 aa2.62□□□□□ -1.99
USP48-211ENST00000526044 TEX49A0A1B0GTD5 131 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 A0A1W2PPM0 123 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 TCL1BO95988 128 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 DNAL4O96015 105 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 TRACP01848 142 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.61□□□□□ -1.99
USP48-211ENST00000526044 Q6ZQY7 126 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 SPRR4Q96PI1 79 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 IMUPQ9GZP8 106 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 VPS13BQ7Z7G8 4022 aa2.61□□□□□ -1.99
USP48-211ENST00000526044 H3BQ85 93 aa2.6□□□□□ -1.99
USP48-211ENST00000526044 TMEM256-PLSCR3K7ERE1 68 aa2.6□□□□□ -1.99
USP48-211ENST00000526044 SPRR1BP22528 89 aa2.6□□□□□ -1.99
USP48-211ENST00000526044 LAMTOR3Q9UHA4 124 aa2.6□□□□□ -1.99
USP48-211ENST00000526044 PKHD1L1Q86WI1 4243 aa2.6□□□□□ -1.99
USP48-211ENST00000526044 IGLV5-48A0A075B6I7 105 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 H3BMG7 143 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 BAALC-AS2P0C853 105 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 CRYGAP11844 174 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 FAM229BQ4G0N7 80 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 LINC00483Q53H64 154 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 GTF2H5Q6ZYL4 71 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 BRK1Q8WUW1 75 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 PPDPFLQ8WWR9 84 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 LINC01600Q96MT4 127 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 ORMDL1Q9P0S3 153 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 SPCS1Q9Y6A9 102 aa2.59□□□□□ -1.99
USP48-211ENST00000526044 SSBP3-AS1Q7Z2R9 100 aa2.58□□□□□ -2
USP48-211ENST00000526044 C3orf22Q8N5N4 141 aa2.58□□□□□ -2
USP48-211ENST00000526044 HERC2O95714 4834 aa2.58□□□□□ -2
USP48-211ENST00000526044 FAM236AA0A1B0GUQ0 79 aa2.57□□□□□ -2
USP48-211ENST00000526044 FAM236BA0A1B0GV22 79 aa2.57□□□□□ -2
USP48-211ENST00000526044 F8WEM9 126 aa2.57□□□□□ -2
USP48-211ENST00000526044 J3QR89 54 aa2.57□□□□□ -2
USP48-211ENST00000526044 K7EP34 96 aa2.57□□□□□ -2
USP48-211ENST00000526044 BPY2O14599 106 aa2.57□□□□□ -2
USP48-211ENST00000526044 A8MWP4 228 aa2.56□□□□□ -2
USP48-211ENST00000526044 KRTAP5-8O75690 187 aa2.56□□□□□ -2
USP48-211ENST00000526044 MOBPQ13875 183 aa2.56□□□□□ -2
USP48-211ENST00000526044 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
USP48-211ENST00000526044 LINC01554Q52M75 96 aa2.56□□□□□ -2
USP48-211ENST00000526044 C9orf153Q5TBE3 101 aa2.56□□□□□ -2
USP48-211ENST00000526044 A6NED7 52 aa2.55□□□□□ -2
USP48-211ENST00000526044 F8W1H4 67 aa2.55□□□□□ -2
USP48-211ENST00000526044 JMJD7-PLA2G4BH0Y9G9 81 aa2.55□□□□□ -2
USP48-211ENST00000526044 H3BT86 120 aa2.55□□□□□ -2
USP48-211ENST00000526044 RBM3P98179 157 aaKnown RBP2.55□□□□□ -2
USP48-211ENST00000526044 Q6JHZ5 121 aa2.55□□□□□ -2
USP48-211ENST00000526044 SPAG11AQ6PDA7 123 aa2.55□□□□□ -2
USP48-211ENST00000526044 SRRM2Q9UQ35 2752 aaKnown RBP2.55□□□□□ -2
USP48-211ENST00000526044 CCDC179H3BU77 68 aa2.54□□□□□ -2
USP48-211ENST00000526044 K7ERS5 55 aa2.54□□□□□ -2
USP48-211ENST00000526044 DSCR8Q96T75 97 aa2.54□□□□□ -2
USP48-211ENST00000526044 FAT3Q8TDW7 4589 aa2.53□□□□□ -2
USP48-211ENST00000526044 A0A0G2JQZ4 141 aa2.53□□□□□ -2
USP48-211ENST00000526044 SPINK1P00995 79 aa2.53□□□□□ -2
USP48-211ENST00000526044 MT1HL1P0DM35 61 aa2.53□□□□□ -2
USP48-211ENST00000526044 PDE6GP18545 87 aa2.53□□□□□ -2
USP48-211ENST00000526044 IGFL1Q6UW32 110 aa2.53□□□□□ -2
USP48-211ENST00000526044 Q8N9L7 120 aa2.53□□□□□ -2
USP48-211ENST00000526044 LINC00304Q8N9R0 145 aa2.53□□□□□ -2
USP48-211ENST00000526044 ABCA13Q86UQ4 5058 aa2.53□□□□□ -2
USP48-211ENST00000526044 TRBV7-4A0A0J9YYF1 115 aa2.52□□□□□ -2.01
USP48-211ENST00000526044 TEN1Q86WV5 123 aa2.52□□□□□ -2.01
USP48-211ENST00000526044 OBSCN-AS1Q96MR7 158 aa2.52□□□□□ -2.01
USP48-211ENST00000526044 LOC110117498A0A087WWA1 95 aa2.51□□□□□ -2.01
USP48-211ENST00000526044 CCKP06307 115 aa2.51□□□□□ -2.01
USP48-211ENST00000526044 ETDBQ3ZM63 59 aa2.51□□□□□ -2.01
USP48-211ENST00000526044 C14orf132Q9NPU4 83 aa2.51□□□□□ -2.01
USP48-211ENST00000526044 LRP1Q07954 4544 aaKnown RBP2.5□□□□□ -2.01
USP48-211ENST00000526044 PCLOQ9Y6V0 5065 aa2.5□□□□□ -2.01
USP48-211ENST00000526044 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
USP48-211ENST00000526044 A0A1B0GW54 56 aa2.5□□□□□ -2.01
USP48-211ENST00000526044 A0A1W2PNM2 257 aa2.5□□□□□ -2.01
USP48-211ENST00000526044 RPS29P62273 56 aaKnown RBP2.5□□□□□ -2.01
USP48-211ENST00000526044 Q6ZQT0 140 aa2.5□□□□□ -2.01
USP48-211ENST00000526044 LIMD2Q9BT23 127 aa2.5□□□□□ -2.01
USP48-211ENST00000526044 TNXBP22105 4242 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms