RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 A8MWP4 228 aa5.26□□□□□ -1.57
SDCBP-212ENST00000523483 CXCL6P80162 114 aa5.26□□□□□ -1.57
SDCBP-212ENST00000523483 ATP5EP2Q5VTU8 51 aa5.26□□□□□ -1.57
SDCBP-212ENST00000523483 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
SDCBP-212ENST00000523483 Q5XG85 94 aa5.25□□□□□ -1.57
SDCBP-212ENST00000523483 IGLV7-46A0A075B6I9 117 aa5.24□□□□□ -1.57
SDCBP-212ENST00000523483 NOTCH2NLQ7Z3S9 236 aa5.24□□□□□ -1.57
SDCBP-212ENST00000523483 PRR15Q8IV56 129 aa5.24□□□□□ -1.57
SDCBP-212ENST00000523483 A0A1B0GVX0 72 aa5.24□□□□□ -1.57
SDCBP-212ENST00000523483 HERC1Q15751 4861 aa5.23□□□□□ -1.57
SDCBP-212ENST00000523483 ASB16-AS1Q495Z4 193 aa5.23□□□□□ -1.57
SDCBP-212ENST00000523483 NDUFS5O43920 106 aa5.23□□□□□ -1.57
SDCBP-212ENST00000523483 SCGB1A1P11684 91 aa5.22□□□□□ -1.57
SDCBP-212ENST00000523483 LINC00313P59037 77 aa5.22□□□□□ -1.57
SDCBP-212ENST00000523483 FAM236AA0A1B0GUQ0 79 aa5.21□□□□□ -1.58
SDCBP-212ENST00000523483 FAM236BA0A1B0GV22 79 aa5.21□□□□□ -1.58
SDCBP-212ENST00000523483 CASC2Q6XLA1 102 aa5.2□□□□□ -1.58
SDCBP-212ENST00000523483 C8orf17Q9NRJ1 99 aa5.2□□□□□ -1.58
SDCBP-212ENST00000523483 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
SDCBP-212ENST00000523483 hDV103S1A0JD37 113 aa5.19□□□□□ -1.58
SDCBP-212ENST00000523483 MMP24-AS1A0A0U1RRL7 71 aa5.17□□□□□ -1.58
SDCBP-212ENST00000523483 FP248Q71RG6 208 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-212ENST00000523483 IMUPQ9GZP8 106 aa5.16□□□□□ -1.58
SDCBP-212ENST00000523483 LPAP08519 4548 aa5.15□□□□□ -1.58
SDCBP-212ENST00000523483 C8orf87E5RJ46 101 aa5.15□□□□□ -1.59
SDCBP-212ENST00000523483 MRPL34Q9BQ48 92 aaKnown RBP5.14□□□□□ -1.59
SDCBP-212ENST00000523483 LRP2P98164 4655 aa5.12□□□□□ -1.59
SDCBP-212ENST00000523483 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
SDCBP-212ENST00000523483 TMEM254Q8TBM7 123 aa5.1□□□□□ -1.59
SDCBP-212ENST00000523483 XP32Q5T750 250 aa5.08□□□□□ -1.6
SDCBP-212ENST00000523483 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
SDCBP-212ENST00000523483 ATOX1O00244 68 aa5.07□□□□□ -1.6
SDCBP-212ENST00000523483 TPRXLQ17RH7 258 aa5.07□□□□□ -1.6
SDCBP-212ENST00000523483 ANAPC13Q9BS18 74 aa5.07□□□□□ -1.6
SDCBP-212ENST00000523483 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
SDCBP-212ENST00000523483 Q8N9P0 234 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-212ENST00000523483 Q5W150 140 aa5.03□□□□□ -1.6
SDCBP-212ENST00000523483 OCR1Q9BZK8 76 aa5.03□□□□□ -1.6
SDCBP-212ENST00000523483 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
SDCBP-212ENST00000523483 IGKV2-30P06310 120 aa5.03□□□□□ -1.6
SDCBP-212ENST00000523483 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
SDCBP-212ENST00000523483 H0Y9P7 68 aa5.02□□□□□ -1.61
SDCBP-212ENST00000523483 C20orf166-AS1Q96NR2 134 aa5.02□□□□□ -1.61
SDCBP-212ENST00000523483 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
SDCBP-212ENST00000523483 TP53AIP1Q9HCN2 124 aa5.01□□□□□ -1.61
SDCBP-212ENST00000523483 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
SDCBP-212ENST00000523483 A8MUU9 505 aa5.01□□□□□ -1.61
SDCBP-212ENST00000523483 RPL37P61927 97 aaKnown RBP5.01□□□□□ -1.61
SDCBP-212ENST00000523483 LINC00208Q96KT6 92 aa5.01□□□□□ -1.61
SDCBP-212ENST00000523483 MP68P56378 58 aa5.01□□□□□ -1.61
SDCBP-212ENST00000523483 Q75L30 129 aa5.01□□□□□ -1.61
SDCBP-212ENST00000523483 TRAV7A0A075B6U4 112 aa5□□□□□ -1.61
SDCBP-212ENST00000523483 C20orf197Q8N268 126 aa5□□□□□ -1.61
SDCBP-212ENST00000523483 SERP2Q8N6R1 65 aa5□□□□□ -1.61
SDCBP-212ENST00000523483 SNURFQ9Y675 71 aa5□□□□□ -1.61
SDCBP-212ENST00000523483 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
SDCBP-212ENST00000523483 UQCRQO14949 82 aa5□□□□□ -1.61
SDCBP-212ENST00000523483 SMIM20Q8N5G0 67 aa4.99□□□□□ -1.61
SDCBP-212ENST00000523483 C1orf64Q8NEQ6 169 aa4.97□□□□□ -1.61
SDCBP-212ENST00000523483 PCP4P48539 62 aa4.96□□□□□ -1.61
SDCBP-212ENST00000523483 MUC2Q02817 5179 aa4.96□□□□□ -1.61
SDCBP-212ENST00000523483 C5orf47Q569G3 176 aa4.96□□□□□ -1.62
SDCBP-212ENST00000523483 COX7CP15954 63 aa4.96□□□□□ -1.62
SDCBP-212ENST00000523483 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
SDCBP-212ENST00000523483 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
SDCBP-212ENST00000523483 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
SDCBP-212ENST00000523483 SPINK7P58062 85 aa4.93□□□□□ -1.62
SDCBP-212ENST00000523483 C7orf65Q6ZTY9 151 aa4.91□□□□□ -1.62
SDCBP-212ENST00000523483 RNF213Q63HN8 5207 aa4.91□□□□□ -1.62
SDCBP-212ENST00000523483 LOC101927531A0A1B0GV80 90 aa4.9□□□□□ -1.63
SDCBP-212ENST00000523483 CYP4F30PQ9H0H9 118 aa4.89□□□□□ -1.63
SDCBP-212ENST00000523483 C4orf26Q17RF5 130 aa4.88□□□□□ -1.63
SDCBP-212ENST00000523483 CYSTM1Q9H1C7 97 aa4.88□□□□□ -1.63
SDCBP-212ENST00000523483 A0A0U1RQV1 116 aa4.88□□□□□ -1.63
SDCBP-212ENST00000523483 LCE2DQ5TA82 110 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-212ENST00000523483 KLKP1Q107X0 134 aa4.86□□□□□ -1.63
SDCBP-212ENST00000523483 H3BPC8 53 aa4.85□□□□□ -1.63
SDCBP-212ENST00000523483 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.63
SDCBP-212ENST00000523483 FAM236DA0A1B0GTK5 79 aa4.84□□□□□ -1.63
SDCBP-212ENST00000523483 FAM236CP0DP71 79 aa4.84□□□□□ -1.63
SDCBP-212ENST00000523483 HRES1P13985 223 aa4.83□□□□□ -1.64
SDCBP-212ENST00000523483 COX6B2Q6YFQ2 88 aa4.81□□□□□ -1.64
SDCBP-212ENST00000523483 H7BZZ5 65 aa4.8□□□□□ -1.64
SDCBP-212ENST00000523483 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
SDCBP-212ENST00000523483 NDUFC1O43677 76 aa4.77□□□□□ -1.65
SDCBP-212ENST00000523483 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
SDCBP-212ENST00000523483 MUC17Q685J3 4493 aa4.73□□□□□ -1.65
SDCBP-212ENST00000523483 TMEM258P61165 79 aa4.7□□□□□ -1.66
SDCBP-212ENST00000523483 KRTAP3-1Q9BYR8 98 aa4.7□□□□□ -1.66
SDCBP-212ENST00000523483 CHKB-CPT1BH3BT56 60 aa4.7□□□□□ -1.66
SDCBP-212ENST00000523483 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
SDCBP-212ENST00000523483 ACYP2P14621 99 aa4.68□□□□□ -1.66
SDCBP-212ENST00000523483 DMAC1Q96GE9 116 aa4.68□□□□□ -1.66
SDCBP-212ENST00000523483 MPLKIPQ8TAP9 179 aa4.67□□□□□ -1.66
SDCBP-212ENST00000523483 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
SDCBP-212ENST00000523483 M0R2T5 61 aa4.66□□□□□ -1.66
SDCBP-212ENST00000523483 A8MUN3 132 aa4.64□□□□□ -1.67
SDCBP-212ENST00000523483 COA5Q86WW8 74 aa4.64□□□□□ -1.67
SDCBP-212ENST00000523483 S4R3F8 94 aa4.64□□□□□ -1.67
SDCBP-212ENST00000523483 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms