RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 IGLV7-46A0A075B6I9 117 aa7.8□□□□□ -1.16
PCDHGB1-201ENST00000523390 COX6B2Q6YFQ2 88 aa7.79□□□□□ -1.16
PCDHGB1-201ENST00000523390 NBPF19A0A087WUL8 3843 aa7.77□□□□□ -1.17
PCDHGB1-201ENST00000523390 LINC00483Q53H64 154 aa7.77□□□□□ -1.17
PCDHGB1-201ENST00000523390 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
PCDHGB1-201ENST00000523390 A0A087X002 238 aa7.75□□□□□ -1.17
PCDHGB1-201ENST00000523390 HRES1P13985 223 aa7.75□□□□□ -1.17
PCDHGB1-201ENST00000523390 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
PCDHGB1-201ENST00000523390 Q5VSD8 79 aa7.74□□□□□ -1.17
PCDHGB1-201ENST00000523390 Q1T7F1 81 aa7.74□□□□□ -1.17
PCDHGB1-201ENST00000523390 TENM2Q9NT68 2774 aa7.73□□□□□ -1.17
PCDHGB1-201ENST00000523390 UQCR11O14957 56 aa7.73□□□□□ -1.17
PCDHGB1-201ENST00000523390 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
PCDHGB1-201ENST00000523390 Q5W150 140 aa7.68□□□□□ -1.18
PCDHGB1-201ENST00000523390 RBM12B-AS1Q9P1G2 102 aa7.68□□□□□ -1.18
PCDHGB1-201ENST00000523390 TGP01266 2768 aa7.68□□□□□ -1.18
PCDHGB1-201ENST00000523390 Q6ZSA8 131 aa7.66□□□□□ -1.18
PCDHGB1-201ENST00000523390 MIR22HGQ0VDD5 57 aa7.66□□□□□ -1.18
PCDHGB1-201ENST00000523390 KRTAP21-3Q3LHN1 58 aa7.64□□□□□ -1.19
PCDHGB1-201ENST00000523390 Q5VV11 94 aa7.62□□□□□ -1.19
PCDHGB1-201ENST00000523390 KRTAP29-1A8MX34 341 aaPredicted RBP7.62□□□□□ -1.19
PCDHGB1-201ENST00000523390 NOTCH2NLQ7Z3S9 236 aa7.62□□□□□ -1.19
PCDHGB1-201ENST00000523390 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
PCDHGB1-201ENST00000523390 SPINK7P58062 85 aa7.6□□□□□ -1.19
PCDHGB1-201ENST00000523390 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
PCDHGB1-201ENST00000523390 A8MU10 97 aa7.57□□□□□ -1.2
PCDHGB1-201ENST00000523390 KTN1-AS1Q86SY8 53 aa7.56□□□□□ -1.2
PCDHGB1-201ENST00000523390 KRTAP13-2Q52LG2 175 aa7.56□□□□□ -1.2
PCDHGB1-201ENST00000523390 A0A0D9SG42 100 aa7.55□□□□□ -1.2
PCDHGB1-201ENST00000523390 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
PCDHGB1-201ENST00000523390 CDC42SE1Q9NRR8 79 aa7.51□□□□□ -1.21
PCDHGB1-201ENST00000523390 Q75L30 129 aa7.49□□□□□ -1.21
PCDHGB1-201ENST00000523390 SPINT4Q6UDR6 99 aa7.47□□□□□ -1.21
PCDHGB1-201ENST00000523390 LINC01558Q9Y6Z2 57 aa7.47□□□□□ -1.21
PCDHGB1-201ENST00000523390 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
PCDHGB1-201ENST00000523390 A0A1B0GU33 70 aa7.45□□□□□ -1.22
PCDHGB1-201ENST00000523390 LCA10Q71F78 164 aa7.44□□□□□ -1.22
PCDHGB1-201ENST00000523390 TRRAPQ9Y4A5 3859 aa7.43□□□□□ -1.22
PCDHGB1-201ENST00000523390 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
PCDHGB1-201ENST00000523390 H3BS24 57 aa7.41□□□□□ -1.22
PCDHGB1-201ENST00000523390 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.23
PCDHGB1-201ENST00000523390 CSAG1Q6PB30 78 aa7.4□□□□□ -1.23
PCDHGB1-201ENST00000523390 S4R3F8 94 aa7.4□□□□□ -1.23
PCDHGB1-201ENST00000523390 PRAC1Q96KF2 57 aa7.39□□□□□ -1.23
PCDHGB1-201ENST00000523390 SRRM2Q9UQ35 2752 aaKnown RBP7.39□□□□□ -1.23
PCDHGB1-201ENST00000523390 ANK3Q12955 4377 aaKnown RBP7.36□□□□□ -1.23
PCDHGB1-201ENST00000523390 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
PCDHGB1-201ENST00000523390 M0R2T5 61 aa7.35□□□□□ -1.23
PCDHGB1-201ENST00000523390 AKAP9Q99996 3911 aa7.34□□□□□ -1.23
PCDHGB1-201ENST00000523390 CRIPTQ9P021 101 aa7.34□□□□□ -1.23
PCDHGB1-201ENST00000523390 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
PCDHGB1-201ENST00000523390 FBN3Q75N90 2809 aa7.25□□□□□ -1.25
PCDHGB1-201ENST00000523390 A6NN06 94 aa7.23□□□□□ -1.25
PCDHGB1-201ENST00000523390 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
PCDHGB1-201ENST00000523390 R4GN34 69 aa7.22□□□□□ -1.25
PCDHGB1-201ENST00000523390 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
PCDHGB1-201ENST00000523390 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
PCDHGB1-201ENST00000523390 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.27
PCDHGB1-201ENST00000523390 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
PCDHGB1-201ENST00000523390 A8MUU9 505 aa7.14□□□□□ -1.27
PCDHGB1-201ENST00000523390 MEGF8Q7Z7M0 2845 aa7.12□□□□□ -1.27
PCDHGB1-201ENST00000523390 COL7A1Q02388 2944 aa7.12□□□□□ -1.27
PCDHGB1-201ENST00000523390 M0QZ58 72 aa7.11□□□□□ -1.27
PCDHGB1-201ENST00000523390 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
PCDHGB1-201ENST00000523390 CSMD3Q7Z407 3707 aa7.1□□□□□ -1.27
PCDHGB1-201ENST00000523390 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
PCDHGB1-201ENST00000523390 XP32Q5T750 250 aa7.02□□□□□ -1.29
PCDHGB1-201ENST00000523390 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
PCDHGB1-201ENST00000523390 ROMO1P60602 79 aa6.93□□□□□ -1.3
PCDHGB1-201ENST00000523390 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
PCDHGB1-201ENST00000523390 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
PCDHGB1-201ENST00000523390 KRTAP13-3Q3SY46 172 aa6.86□□□□□ -1.31
PCDHGB1-201ENST00000523390 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
PCDHGB1-201ENST00000523390 ANK2Q01484 3957 aa6.81□□□□□ -1.32
PCDHGB1-201ENST00000523390 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
PCDHGB1-201ENST00000523390 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
PCDHGB1-201ENST00000523390 LUZP6Q538Z0 58 aa6.77□□□□□ -1.32
PCDHGB1-201ENST00000523390 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
PCDHGB1-201ENST00000523390 CMYA5Q8N3K9 4069 aa6.73□□□□□ -1.33
PCDHGB1-201ENST00000523390 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
PCDHGB1-201ENST00000523390 H0YAA0 97 aa6.7□□□□□ -1.34
PCDHGB1-201ENST00000523390 P0C880 135 aa6.63□□□□□ -1.35
PCDHGB1-201ENST00000523390 DNHD1Q96M86 4753 aa6.61□□□□□ -1.35
PCDHGB1-201ENST00000523390 DNAH9Q9NYC9 4486 aa6.59□□□□□ -1.36
PCDHGB1-201ENST00000523390 DNAH3Q8TD57 4116 aa6.58□□□□□ -1.36
PCDHGB1-201ENST00000523390 LYSTQ99698 3801 aa6.53□□□□□ -1.36
PCDHGB1-201ENST00000523390 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
PCDHGB1-201ENST00000523390 PLECQ15149 4684 aaKnown RBP6.51□□□□□ -1.37
PCDHGB1-201ENST00000523390 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
PCDHGB1-201ENST00000523390 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
PCDHGB1-201ENST00000523390 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
PCDHGB1-201ENST00000523390 TNP1P09430 55 aa6.49□□□□□ -1.37
PCDHGB1-201ENST00000523390 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
PCDHGB1-201ENST00000523390 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
PCDHGB1-201ENST00000523390 DNAH1Q9P2D7 4330 aa6.42□□□□□ -1.38
PCDHGB1-201ENST00000523390 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
PCDHGB1-201ENST00000523390 PRKDCP78527 4128 aaKnown RBP6.41□□□□□ -1.38
PCDHGB1-201ENST00000523390 DNAH5Q8TE73 4624 aa6.39□□□□□ -1.39
PCDHGB1-201ENST00000523390 DNAH7Q8WXX0 4024 aa6.39□□□□□ -1.39
PCDHGB1-201ENST00000523390 DNAH11Q96DT5 4516 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms