RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
RAB11FIP1-204ENST00000522774 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
RAB11FIP1-204ENST00000522774 ASB16-AS1Q495Z4 193 aa6.36□□□□□ -1.39
RAB11FIP1-204ENST00000522774 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
RAB11FIP1-204ENST00000522774 A0A1B0GVX0 72 aa6.35□□□□□ -1.39
RAB11FIP1-204ENST00000522774 A0A087X002 238 aa6.34□□□□□ -1.39
RAB11FIP1-204ENST00000522774 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
RAB11FIP1-204ENST00000522774 MPLKIPQ8TAP9 179 aa6.34□□□□□ -1.39
RAB11FIP1-204ENST00000522774 CYP4F30PQ9H0H9 118 aa6.34□□□□□ -1.39
RAB11FIP1-204ENST00000522774 H3BPC8 53 aa6.34□□□□□ -1.4
RAB11FIP1-204ENST00000522774 PRR26Q8N8Z3 221 aa6.34□□□□□ -1.4
RAB11FIP1-204ENST00000522774 KRTAP10-1P60331 282 aa6.33□□□□□ -1.4
RAB11FIP1-204ENST00000522774 CDK2AP2O75956 126 aa6.32□□□□□ -1.4
RAB11FIP1-204ENST00000522774 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
RAB11FIP1-204ENST00000522774 Q6ZSA8 131 aa6.31□□□□□ -1.4
RAB11FIP1-204ENST00000522774 RBM12B-AS1Q9P1G2 102 aa6.3□□□□□ -1.4
RAB11FIP1-204ENST00000522774 NDUFS5O43920 106 aa6.3□□□□□ -1.4
RAB11FIP1-204ENST00000522774 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
RAB11FIP1-204ENST00000522774 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
RAB11FIP1-204ENST00000522774 MRPL34Q9BQ48 92 aaKnown RBP6.29□□□□□ -1.4
RAB11FIP1-204ENST00000522774 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
RAB11FIP1-204ENST00000522774 SSBP3-AS1Q7Z2R9 100 aa6.27□□□□□ -1.41
RAB11FIP1-204ENST00000522774 KRTAP13-2Q52LG2 175 aa6.27□□□□□ -1.41
RAB11FIP1-204ENST00000522774 SACSQ9NZJ4 4579 aa6.26□□□□□ -1.41
RAB11FIP1-204ENST00000522774 PCOTHQ58A44 107 aa6.26□□□□□ -1.41
RAB11FIP1-204ENST00000522774 PKHD1P08F94 4074 aa6.25□□□□□ -1.41
RAB11FIP1-204ENST00000522774 IGLV7-46A0A075B6I9 117 aa6.22□□□□□ -1.41
RAB11FIP1-204ENST00000522774 C8orf87E5RJ46 101 aa6.22□□□□□ -1.41
RAB11FIP1-204ENST00000522774 Q1T7F1 81 aa6.22□□□□□ -1.41
RAB11FIP1-204ENST00000522774 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
RAB11FIP1-204ENST00000522774 Q5W150 140 aa6.21□□□□□ -1.42
RAB11FIP1-204ENST00000522774 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
RAB11FIP1-204ENST00000522774 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
RAB11FIP1-204ENST00000522774 PSPHP1O15172 72 aa6.17□□□□□ -1.42
RAB11FIP1-204ENST00000522774 COA5Q86WW8 74 aa6.17□□□□□ -1.42
RAB11FIP1-204ENST00000522774 DYNC1H1Q14204 4646 aaKnown RBP6.17□□□□□ -1.42
RAB11FIP1-204ENST00000522774 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
RAB11FIP1-204ENST00000522774 KTN1-AS1Q86SY8 53 aa6.16□□□□□ -1.42
RAB11FIP1-204ENST00000522774 LINC00313P59037 77 aa6.15□□□□□ -1.42
RAB11FIP1-204ENST00000522774 LOC101927531A0A1B0GV80 90 aa6.14□□□□□ -1.43
RAB11FIP1-204ENST00000522774 PLA2G1BP04054 148 aaKnown RBP6.14□□□□□ -1.43
RAB11FIP1-204ENST00000522774 A8MUN3 132 aa6.13□□□□□ -1.43
RAB11FIP1-204ENST00000522774 RETNLBQ9BQ08 111 aa6.12□□□□□ -1.43
RAB11FIP1-204ENST00000522774 FAT1Q14517 4588 aa6.11□□□□□ -1.43
RAB11FIP1-204ENST00000522774 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
RAB11FIP1-204ENST00000522774 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
RAB11FIP1-204ENST00000522774 HRES1P13985 223 aa6.1□□□□□ -1.43
RAB11FIP1-204ENST00000522774 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
RAB11FIP1-204ENST00000522774 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
RAB11FIP1-204ENST00000522774 APOBP04114 4563 aaKnown RBP6.09□□□□□ -1.43
RAB11FIP1-204ENST00000522774 Q5VV11 94 aa6.09□□□□□ -1.43
RAB11FIP1-204ENST00000522774 SMR3BP02814 79 aaPredicted RBP6.08□□□□□ -1.44
RAB11FIP1-204ENST00000522774 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
RAB11FIP1-204ENST00000522774 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
RAB11FIP1-204ENST00000522774 SPINK1P00995 79 aa6.05□□□□□ -1.44
RAB11FIP1-204ENST00000522774 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
RAB11FIP1-204ENST00000522774 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
RAB11FIP1-204ENST00000522774 RYR2Q92736 4967 aa6.03□□□□□ -1.44
RAB11FIP1-204ENST00000522774 A0A1B0GVY2 172 aa6.03□□□□□ -1.44
RAB11FIP1-204ENST00000522774 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
RAB11FIP1-204ENST00000522774 LINC00304Q8N9R0 145 aa6.02□□□□□ -1.44
RAB11FIP1-204ENST00000522774 A8MU10 97 aa6.02□□□□□ -1.45
RAB11FIP1-204ENST00000522774 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
RAB11FIP1-204ENST00000522774 KMT2CQ8NEZ4 4911 aaKnown RBP6□□□□□ -1.45
RAB11FIP1-204ENST00000522774 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
RAB11FIP1-204ENST00000522774 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
RAB11FIP1-204ENST00000522774 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
RAB11FIP1-204ENST00000522774 ACYP2P14621 99 aa5.99□□□□□ -1.45
RAB11FIP1-204ENST00000522774 Q75L30 129 aa5.99□□□□□ -1.45
RAB11FIP1-204ENST00000522774 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
RAB11FIP1-204ENST00000522774 LCA10Q71F78 164 aa5.98□□□□□ -1.45
RAB11FIP1-204ENST00000522774 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.45
RAB11FIP1-204ENST00000522774 A6NED7 52 aa5.93□□□□□ -1.46
RAB11FIP1-204ENST00000522774 C9orf92A6NGG3 77 aa5.91□□□□□ -1.46
RAB11FIP1-204ENST00000522774 C7orf65Q6ZTY9 151 aa5.91□□□□□ -1.46
RAB11FIP1-204ENST00000522774 SPINK7P58062 85 aa5.9□□□□□ -1.47
RAB11FIP1-204ENST00000522774 SPTSSBQ8NFR3 76 aa5.87□□□□□ -1.47
RAB11FIP1-204ENST00000522774 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
RAB11FIP1-204ENST00000522774 A6NN06 94 aa5.85□□□□□ -1.47
RAB11FIP1-204ENST00000522774 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
RAB11FIP1-204ENST00000522774 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
RAB11FIP1-204ENST00000522774 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
RAB11FIP1-204ENST00000522774 HSPG2P98160 4391 aa5.85□□□□□ -1.47
RAB11FIP1-204ENST00000522774 TNXBP22105 4242 aa5.85□□□□□ -1.47
RAB11FIP1-204ENST00000522774 Q8N1X5 172 aa5.85□□□□□ -1.47
RAB11FIP1-204ENST00000522774 FLG2Q5D862 2391 aaPredicted RBP5.84□□□□□ -1.47
RAB11FIP1-204ENST00000522774 A8MUU9 505 aa5.84□□□□□ -1.47
RAB11FIP1-204ENST00000522774 C20orf166-AS1Q96NR2 134 aa5.84□□□□□ -1.47
RAB11FIP1-204ENST00000522774 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.47
RAB11FIP1-204ENST00000522774 RYR3Q15413 4870 aa5.82□□□□□ -1.48
RAB11FIP1-204ENST00000522774 A0A1B0GU69 56 aa5.8□□□□□ -1.48
RAB11FIP1-204ENST00000522774 J3QL48 77 aa5.76□□□□□ -1.49
RAB11FIP1-204ENST00000522774 RYR1P21817 5038 aa5.76□□□□□ -1.49
RAB11FIP1-204ENST00000522774 Q5VSD8 79 aa5.75□□□□□ -1.49
RAB11FIP1-204ENST00000522774 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
RAB11FIP1-204ENST00000522774 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
RAB11FIP1-204ENST00000522774 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
RAB11FIP1-204ENST00000522774 MYCBP2O75592 4640 aa5.72□□□□□ -1.49
RAB11FIP1-204ENST00000522774 DMBT1Q9UGM3 2413 aaPredicted RBP5.71□□□□□ -1.5
RAB11FIP1-204ENST00000522774 KIAA1109Q2LD37 5005 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms