RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	NBEAL1	Q6ZS30	2694 aa		5.62	□□□□□ -1.51
TCF7-223	ENST00000522653	NBEAL2	Q6ZNJ1	2754 aa		5.61	□□□□□ -1.51
TCF7-223	ENST00000522653	NBEA	Q8NFP9	2946 aa		5.61	□□□□□ -1.51
TCF7-223	ENST00000522653	HIVEP1	P15822	2718 aa		5.6	□□□□□ -1.51
TCF7-223	ENST00000522653	UBR5	O95071	2799 aa	Predicted RBP	5.6	□□□□□ -1.51
TCF7-223	ENST00000522653	NSD1	Q96L73	2696 aa	Predicted RBP	5.59	□□□□□ -1.51
TCF7-223	ENST00000522653	DMXL2	Q8TDJ6	3036 aa		5.59	□□□□□ -1.51
TCF7-223	ENST00000522653	KRTAP10-8	P60410	259 aa		5.59	□□□□□ -1.51
TCF7-223	ENST00000522653	SPEG	Q15772	3267 aa		5.59	□□□□□ -1.52
TCF7-223	ENST00000522653	FRYL	O94915	3013 aa		5.58	□□□□□ -1.52
TCF7-223	ENST00000522653	DMXL1	Q9Y485	3027 aa		5.58	□□□□□ -1.52
TCF7-223	ENST00000522653	ITPR1	Q14643	2758 aa		5.58	□□□□□ -1.52
TCF7-223	ENST00000522653	BOD1L1	Q8NFC6	3051 aa		5.57	□□□□□ -1.52
TCF7-223	ENST00000522653	FLG2	Q5D862	2391 aa	Predicted RBP	5.57	□□□□□ -1.52
TCF7-223	ENST00000522653	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.57	□□□□□ -1.52
TCF7-223	ENST00000522653	USP34	Q70CQ2	3546 aa		5.56	□□□□□ -1.52
TCF7-223	ENST00000522653	FREM2	Q5SZK8	3169 aa		5.55	□□□□□ -1.52
TCF7-223	ENST00000522653	KALRN	O60229	2985 aa		5.54	□□□□□ -1.52
TCF7-223	ENST00000522653		A0A1B0GVY2	172 aa		5.54	□□□□□ -1.52
TCF7-223	ENST00000522653	UTP20	O75691	2785 aa	Known RBP	5.54	□□□□□ -1.52
TCF7-223	ENST00000522653	APC	P25054	2843 aa		5.53	□□□□□ -1.52
TCF7-223	ENST00000522653	ATM	Q13315	3056 aa		5.53	□□□□□ -1.52
TCF7-223	ENST00000522653	MYO15A	Q9UKN7	3530 aa		5.52	□□□□□ -1.53
TCF7-223	ENST00000522653		H0YAA0	97 aa		5.51	□□□□□ -1.53
TCF7-223	ENST00000522653	MAP1A	P78559	2803 aa	Predicted RBP	5.5	□□□□□ -1.53
TCF7-223	ENST00000522653	KRTAP1-4	P0C5Y4	121 aa		5.5	□□□□□ -1.53
TCF7-223	ENST00000522653	COL12A1	Q99715	3063 aa		5.49	□□□□□ -1.53
TCF7-223	ENST00000522653	KRTAP13-3	Q3SY46	172 aa		5.49	□□□□□ -1.53
TCF7-223	ENST00000522653	ADGRG4	Q8IZF6	3080 aa		5.46	□□□□□ -1.54
TCF7-223	ENST00000522653	LRBA	P50851	2863 aa		5.42	□□□□□ -1.54
TCF7-223	ENST00000522653	TENM4	Q6N022	2769 aa		5.42	□□□□□ -1.54
TCF7-223	ENST00000522653	C10orf95	Q9H7T3	257 aa		5.42	□□□□□ -1.54
TCF7-223	ENST00000522653	LOC400499	M0QZD8	3231 aa		5.42	□□□□□ -1.54
TCF7-223	ENST00000522653	STAB2	Q8WWQ8	2551 aa		5.4	□□□□□ -1.55
TCF7-223	ENST00000522653	TACC2	O95359	2948 aa		5.4	□□□□□ -1.55
TCF7-223	ENST00000522653		P0C880	135 aa		5.39	□□□□□ -1.55
TCF7-223	ENST00000522653	ZZEF1	O43149	2961 aa		5.36	□□□□□ -1.55
TCF7-223	ENST00000522653	DMD	P11532	3685 aa		5.35	□□□□□ -1.55
TCF7-223	ENST00000522653	NIPBL	Q6KC79	2804 aa	eCLIP	5.34	□□□□□ -1.56
TCF7-223	ENST00000522653	MUC3A	Q02505	3323 aa		5.34	□□□□□ -1.56
TCF7-223	ENST00000522653	ASH1L	Q9NR48	2969 aa	Known RBP	5.3	□□□□□ -1.56
TCF7-223	ENST00000522653	HRNR	Q86YZ3	2850 aa	Predicted RBP	5.29	□□□□□ -1.56
TCF7-223	ENST00000522653	WDFY3	Q8IZQ1	3526 aa		5.28	□□□□□ -1.56
TCF7-223	ENST00000522653	CFAP47	Q6ZTR5	3102 aa		5.27	□□□□□ -1.57
TCF7-223	ENST00000522653	LAMA5	O15230	3695 aa		5.25	□□□□□ -1.57
TCF7-223	ENST00000522653	CRYBG3	Q68DQ2	2970 aa		5.24	□□□□□ -1.57
TCF7-223	ENST00000522653	RELN	P78509	3460 aa		5.23	□□□□□ -1.57
TCF7-223	ENST00000522653	ZAN	Q9Y493	2812 aa		5.22	□□□□□ -1.57
TCF7-223	ENST00000522653	ASPM	Q8IZT6	3477 aa		5.21	□□□□□ -1.58
TCF7-223	ENST00000522653	DCHS1	Q96JQ0	3298 aa		5.2	□□□□□ -1.58
TCF7-223	ENST00000522653	CELSR2	Q9HCU4	2923 aa		5.18	□□□□□ -1.58
TCF7-223	ENST00000522653	DCHS2	Q6V1P9	2916 aa		5.15	□□□□□ -1.59
TCF7-223	ENST00000522653	PDZD2	O15018	2839 aa		5.14	□□□□□ -1.59
TCF7-223	ENST00000522653	ZFHX4	Q86UP3	3567 aa		5.14	□□□□□ -1.59
TCF7-223	ENST00000522653	FBN2	P35556	2912 aa		5.13	□□□□□ -1.59
TCF7-223	ENST00000522653	NF1	P21359	2839 aa		5.11	□□□□□ -1.59
TCF7-223	ENST00000522653	MXRA5	Q9NR99	2828 aa		5.1	□□□□□ -1.59
TCF7-223	ENST00000522653	KRTAP12-2	P59991	146 aa		5.05	□□□□□ -1.6
TCF7-223	ENST00000522653	TG	P01266	2768 aa		5.05	□□□□□ -1.6
TCF7-223	ENST00000522653	TENM2	Q9NT68	2774 aa		5.04	□□□□□ -1.6
TCF7-223	ENST00000522653	SMG1	Q96Q15	3661 aa	Known RBP	5	□□□□□ -1.61
TCF7-223	ENST00000522653	KRTAP15-1	Q3LI76	137 aa		5	□□□□□ -1.61
TCF7-223	ENST00000522653	NBPF19	A0A087WUL8	3843 aa		5	□□□□□ -1.61
TCF7-223	ENST00000522653	ANK3	Q12955	4377 aa	Known RBP	4.99	□□□□□ -1.61
TCF7-223	ENST00000522653	KRTAP12-1	P59990	96 aa		4.99	□□□□□ -1.61
TCF7-223	ENST00000522653	OTOG	Q6ZRI0	2925 aa		4.98	□□□□□ -1.61
TCF7-223	ENST00000522653	BSN	Q9UPA5	3926 aa		4.98	□□□□□ -1.61
TCF7-223	ENST00000522653	TENM1	Q9UKZ4	2725 aa		4.96	□□□□□ -1.61
TCF7-223	ENST00000522653	KRTAP3-1	Q9BYR8	98 aa		4.96	□□□□□ -1.62
TCF7-223	ENST00000522653	CELSR1	Q9NYQ6	3014 aa		4.94	□□□□□ -1.62
TCF7-223	ENST00000522653	KRTAP13-4	Q3LI77	160 aa		4.94	□□□□□ -1.62
TCF7-223	ENST00000522653	TENM3	Q9P273	2699 aa		4.93	□□□□□ -1.62
TCF7-223	ENST00000522653	SPEN	Q96T58	3664 aa	Known RBP	4.93	□□□□□ -1.62
TCF7-223	ENST00000522653	KRTAP10-6	P60371	365 aa	Predicted RBP	4.89	□□□□□ -1.63
TCF7-223	ENST00000522653	CSMD1	Q96PZ7	3565 aa		4.87	□□□□□ -1.63
TCF7-223	ENST00000522653	MT1HL1	P0DM35	61 aa		4.85	□□□□□ -1.63
TCF7-223	ENST00000522653	SVEP1	Q4LDE5	3571 aa		4.82	□□□□□ -1.64
TCF7-223	ENST00000522653	CSMD2	Q7Z408	3487 aa		4.8	□□□□□ -1.64
TCF7-223	ENST00000522653	FBN1	P35555	2871 aa	Known RBP	4.8	□□□□□ -1.64
TCF7-223	ENST00000522653	ZFHX3	Q15911	3703 aa		4.79	□□□□□ -1.64
TCF7-223	ENST00000522653	VWF	P04275	2813 aa		4.77	□□□□□ -1.65
TCF7-223	ENST00000522653	INE1	O15225	51 aa		4.76	□□□□□ -1.65
TCF7-223	ENST00000522653	PKD1L1	Q8TDX9	2849 aa		4.76	□□□□□ -1.65
TCF7-223	ENST00000522653	KRTAP3-2	Q9BYR7	98 aa		4.71	□□□□□ -1.65
TCF7-223	ENST00000522653	KRTAP10-12	P60413	245 aa		4.71	□□□□□ -1.66
TCF7-223	ENST00000522653	ALMS1	Q8TCU4	4167 aa		4.7	□□□□□ -1.66
TCF7-223	ENST00000522653	LCE2D	Q5TA82	110 aa	Predicted RBP	4.68	□□□□□ -1.66
TCF7-223	ENST00000522653	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.66	□□□□□ -1.66
TCF7-223	ENST00000522653	KRTAP3-3	Q9BYR6	98 aa		4.65	□□□□□ -1.66
TCF7-223	ENST00000522653	TRRAP	Q9Y4A5	3859 aa		4.63	□□□□□ -1.67
TCF7-223	ENST00000522653	KRTAP8-1	Q8IUC2	63 aa		4.62	□□□□□ -1.67
TCF7-223	ENST00000522653	KRTAP10-4	P60372	401 aa	Predicted RBP	4.61	□□□□□ -1.67
TCF7-223	ENST00000522653	VPS13C	Q709C8	3753 aa		4.61	□□□□□ -1.67
TCF7-223	ENST00000522653	AKAP9	Q99996	3911 aa		4.59	□□□□□ -1.67
TCF7-223	ENST00000522653	KRTAP23-1	A1A580	65 aa		4.59	□□□□□ -1.67
TCF7-223	ENST00000522653	FBN3	Q75N90	2809 aa		4.58	□□□□□ -1.68
TCF7-223	ENST00000522653	KRTAP4-5	Q9BYR2	181 aa		4.58	□□□□□ -1.68
TCF7-223	ENST00000522653	CUBN	O60494	3623 aa		4.57	□□□□□ -1.68
TCF7-223	ENST00000522653	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.56	□□□□□ -1.68
TCF7-223	ENST00000522653	SRRM2	Q9UQ35	2752 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms