RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 DNAH11Q96DT5 4516 aa9.97□□□□□ -0.81
CHMP7-203ENST00000517325 IGLV7-43P04211 117 aa9.97□□□□□ -0.81
CHMP7-203ENST00000517325 SPANXA2-OT1Q8N9U9 137 aa9.96□□□□□ -0.82
CHMP7-203ENST00000517325 MMP24-AS1A0A0U1RRL7 71 aa9.95□□□□□ -0.82
CHMP7-203ENST00000517325 LCA10Q71F78 164 aa9.95□□□□□ -0.82
CHMP7-203ENST00000517325 CIRBP-AS1Q8TBR5 109 aa9.95□□□□□ -0.82
CHMP7-203ENST00000517325 LIMD2Q9BT23 127 aa9.94□□□□□ -0.82
CHMP7-203ENST00000517325 PCOTHQ58A44 107 aa9.93□□□□□ -0.82
CHMP7-203ENST00000517325 COA5Q86WW8 74 aa9.93□□□□□ -0.82
CHMP7-203ENST00000517325 ALMS1Q8TCU4 4167 aa9.92□□□□□ -0.82
CHMP7-203ENST00000517325 A6NED7 52 aa9.9□□□□□ -0.82
CHMP7-203ENST00000517325 HYDINQ4G0P3 5121 aa9.9□□□□□ -0.82
CHMP7-203ENST00000517325 H3BPC8 53 aa9.87□□□□□ -0.83
CHMP7-203ENST00000517325 PKD1P98161 4303 aa9.87□□□□□ -0.83
CHMP7-203ENST00000517325 FAT2Q9NYQ8 4349 aa9.87□□□□□ -0.83
CHMP7-203ENST00000517325 KRTAP10-1P60331 282 aa9.86□□□□□ -0.83
CHMP7-203ENST00000517325 CD164Q04900 197 aa9.86□□□□□ -0.83
CHMP7-203ENST00000517325 ASB16-AS1Q495Z4 193 aa9.86□□□□□ -0.83
CHMP7-203ENST00000517325 SPAG11AQ6PDA7 123 aa9.86□□□□□ -0.83
CHMP7-203ENST00000517325 Q6ZSA8 131 aa9.85□□□□□ -0.83
CHMP7-203ENST00000517325 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
CHMP7-203ENST00000517325 IGLV7-46A0A075B6I9 117 aa9.84□□□□□ -0.83
CHMP7-203ENST00000517325 IGHV6-1A0A0B4J1U7 121 aa9.84□□□□□ -0.83
CHMP7-203ENST00000517325 A0A1B0GVX0 72 aa9.84□□□□□ -0.83
CHMP7-203ENST00000517325 Q75L30 129 aa9.84□□□□□ -0.83
CHMP7-203ENST00000517325 KTN1-AS1Q86SY8 53 aa9.83□□□□□ -0.84
CHMP7-203ENST00000517325 LRP1BQ9NZR2 4599 aa9.82□□□□□ -0.84
CHMP7-203ENST00000517325 LOC101927531A0A1B0GV80 90 aa9.81□□□□□ -0.84
CHMP7-203ENST00000517325 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
CHMP7-203ENST00000517325 A0A087X002 238 aa9.8□□□□□ -0.84
CHMP7-203ENST00000517325 CDK2AP2O75956 126 aa9.8□□□□□ -0.84
CHMP7-203ENST00000517325 NOTCH2NLQ7Z3S9 236 aa9.8□□□□□ -0.84
CHMP7-203ENST00000517325 ATP11AUNQ6ZP68 121 aa9.79□□□□□ -0.84
CHMP7-203ENST00000517325 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
CHMP7-203ENST00000517325 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.85
CHMP7-203ENST00000517325 A6NN06 94 aa9.77□□□□□ -0.85
CHMP7-203ENST00000517325 SSBP3-AS1Q7Z2R9 100 aa9.76□□□□□ -0.85
CHMP7-203ENST00000517325 NDUFS5O43920 106 aa9.75□□□□□ -0.85
CHMP7-203ENST00000517325 SPINK7P58062 85 aa9.74□□□□□ -0.85
CHMP7-203ENST00000517325 TP53AIP1Q9HCN2 124 aa9.74□□□□□ -0.85
CHMP7-203ENST00000517325 KRTAP13-2Q52LG2 175 aa9.73□□□□□ -0.85
CHMP7-203ENST00000517325 MRPL34Q9BQ48 92 aaKnown RBP9.73□□□□□ -0.85
CHMP7-203ENST00000517325 CDC42SE1Q9NRR8 79 aa9.73□□□□□ -0.85
CHMP7-203ENST00000517325 HRES1P13985 223 aa9.71□□□□□ -0.86
CHMP7-203ENST00000517325 LINC01558Q9Y6Z2 57 aa9.71□□□□□ -0.86
CHMP7-203ENST00000517325 VPS13BQ7Z7G8 4022 aa9.68□□□□□ -0.86
CHMP7-203ENST00000517325 KRTAP1-4P0C5Y4 121 aa9.67□□□□□ -0.86
CHMP7-203ENST00000517325 SACSQ9NZJ4 4579 aa9.65□□□□□ -0.86
CHMP7-203ENST00000517325 PRR26Q8N8Z3 221 aa9.65□□□□□ -0.87
CHMP7-203ENST00000517325 PKHD1P08F94 4074 aa9.64□□□□□ -0.87
CHMP7-203ENST00000517325 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
CHMP7-203ENST00000517325 Q5W150 140 aa9.59□□□□□ -0.87
CHMP7-203ENST00000517325 C8orf87E5RJ46 101 aa9.58□□□□□ -0.88
CHMP7-203ENST00000517325 KRTAP13-3Q3SY46 172 aa9.56□□□□□ -0.88
CHMP7-203ENST00000517325 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
CHMP7-203ENST00000517325 LINC00313P59037 77 aa9.54□□□□□ -0.88
CHMP7-203ENST00000517325 PRAC1Q96KF2 57 aa9.52□□□□□ -0.89
CHMP7-203ENST00000517325 TYMSOSQ8TAI1 123 aa9.51□□□□□ -0.89
CHMP7-203ENST00000517325 DYNC1H1Q14204 4646 aaKnown RBP9.5□□□□□ -0.89
CHMP7-203ENST00000517325 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
CHMP7-203ENST00000517325 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
CHMP7-203ENST00000517325 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.89
CHMP7-203ENST00000517325 SMR3BP02814 79 aaPredicted RBP9.46□□□□□ -0.89
CHMP7-203ENST00000517325 A0A1B0GVY2 172 aa9.45□□□□□ -0.9
CHMP7-203ENST00000517325 RETNLBQ9BQ08 111 aa9.44□□□□□ -0.9
CHMP7-203ENST00000517325 SPINK1P00995 79 aa9.43□□□□□ -0.9
CHMP7-203ENST00000517325 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
CHMP7-203ENST00000517325 ACYP2P14621 99 aa9.39□□□□□ -0.91
CHMP7-203ENST00000517325 APOBP04114 4563 aaKnown RBP9.39□□□□□ -0.91
CHMP7-203ENST00000517325 FAT1Q14517 4588 aa9.38□□□□□ -0.91
CHMP7-203ENST00000517325 LINC00304Q8N9R0 145 aa9.37□□□□□ -0.91
CHMP7-203ENST00000517325 KRTAP10-4P60372 401 aaPredicted RBP9.35□□□□□ -0.91
CHMP7-203ENST00000517325 RYR2Q92736 4967 aa9.35□□□□□ -0.91
CHMP7-203ENST00000517325 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
CHMP7-203ENST00000517325 A0A1B0GU69 56 aa9.33□□□□□ -0.92
CHMP7-203ENST00000517325 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
CHMP7-203ENST00000517325 LCE2DQ5TA82 110 aaPredicted RBP9.32□□□□□ -0.92
CHMP7-203ENST00000517325 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
CHMP7-203ENST00000517325 KMT2CQ8NEZ4 4911 aaKnown RBP9.3□□□□□ -0.92
CHMP7-203ENST00000517325 PKHD1L1Q86WI1 4243 aa9.25□□□□□ -0.93
CHMP7-203ENST00000517325 IGKV2D-30A0A075B6S6 120 aa9.25□□□□□ -0.93
CHMP7-203ENST00000517325 SPATA8Q6RVD6 105 aa9.24□□□□□ -0.93
CHMP7-203ENST00000517325 MIR22HGQ0VDD5 57 aa9.22□□□□□ -0.93
CHMP7-203ENST00000517325 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
CHMP7-203ENST00000517325 UQCR11O14957 56 aa9.17□□□□□ -0.94
CHMP7-203ENST00000517325 C9orf92A6NGG3 77 aa9.16□□□□□ -0.94
CHMP7-203ENST00000517325 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
CHMP7-203ENST00000517325 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
CHMP7-203ENST00000517325 A8MUU9 505 aa9.08□□□□□ -0.96
CHMP7-203ENST00000517325 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
CHMP7-203ENST00000517325 HSPG2P98160 4391 aa9.04□□□□□ -0.96
CHMP7-203ENST00000517325 LRP1Q07954 4544 aaKnown RBP9.04□□□□□ -0.96
CHMP7-203ENST00000517325 H3BS24 57 aa9.03□□□□□ -0.96
CHMP7-203ENST00000517325 Q8N1X5 172 aa9.02□□□□□ -0.96
CHMP7-203ENST00000517325 RYR3Q15413 4870 aa9.01□□□□□ -0.97
CHMP7-203ENST00000517325 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
CHMP7-203ENST00000517325 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
CHMP7-203ENST00000517325 Q5VSD8 79 aa9□□□□□ -0.97
CHMP7-203ENST00000517325 TNXBP22105 4242 aa8.99□□□□□ -0.97
CHMP7-203ENST00000517325 KRTAP10-8P60410 259 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms