RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 UQCC3Q6UW78 93 aa2.92□□□□□ -1.94
CLDND1-229ENST00000513988 TEN1Q86WV5 123 aa2.92□□□□□ -1.94
CLDND1-229ENST00000513988 A0A096LNJ9 63 aa2.91□□□□□ -1.94
CLDND1-229ENST00000513988 VAMP3Q15836 100 aa2.91□□□□□ -1.94
CLDND1-229ENST00000513988 LEPROTO15243 131 aa2.9□□□□□ -1.95
CLDND1-229ENST00000513988 IGKV3D-7A0A0C4DH55 119 aa2.89□□□□□ -1.95
CLDND1-229ENST00000513988 Q6ZQY7 126 aa2.89□□□□□ -1.95
CLDND1-229ENST00000513988 LINC00308Q8TCZ7 52 aa2.89□□□□□ -1.95
CLDND1-229ENST00000513988 C8orf87E5RJ46 101 aa2.88□□□□□ -1.95
CLDND1-229ENST00000513988 J3QQQ9 107 aa2.88□□□□□ -1.95
CLDND1-229ENST00000513988 SNHG12Q9BXW3 62 aa2.88□□□□□ -1.95
CLDND1-229ENST00000513988 PMCHL1Q16048 86 aa2.87□□□□□ -1.95
CLDND1-229ENST00000513988 DEFB116Q30KQ4 102 aa2.87□□□□□ -1.95
CLDND1-229ENST00000513988 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
CLDND1-229ENST00000513988 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
CLDND1-229ENST00000513988 C9JQL5 133 aa2.86□□□□□ -1.95
CLDND1-229ENST00000513988 H0YAA0 97 aa2.86□□□□□ -1.95
CLDND1-229ENST00000513988 PDE6GP18545 87 aa2.86□□□□□ -1.95
CLDND1-229ENST00000513988 RGS21Q2M5E4 152 aa2.86□□□□□ -1.95
CLDND1-229ENST00000513988 S4R3F8 94 aa2.86□□□□□ -1.95
CLDND1-229ENST00000513988 SLC51BQ86UW2 128 aa2.85□□□□□ -1.95
CLDND1-229ENST00000513988 Q6ZVQ6 151 aa2.84□□□□□ -1.95
CLDND1-229ENST00000513988 A0A1B0GVX0 72 aa2.83□□□□□ -1.96
CLDND1-229ENST00000513988 A6NDN8 102 aa2.83□□□□□ -1.96
CLDND1-229ENST00000513988 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
CLDND1-229ENST00000513988 hADV29S1A0JD25 119 aa2.82□□□□□ -1.96
CLDND1-229ENST00000513988 A8MUN3 132 aa2.82□□□□□ -1.96
CLDND1-229ENST00000513988 HSBP1O75506 76 aa2.82□□□□□ -1.96
CLDND1-229ENST00000513988 SERF1AO75920 110 aa2.82□□□□□ -1.96
CLDND1-229ENST00000513988 LINC00575Q6W349 94 aa2.82□□□□□ -1.96
CLDND1-229ENST00000513988 PPDPFLQ8WWR9 84 aa2.82□□□□□ -1.96
CLDND1-229ENST00000513988 RAB37Q96AX2 223 aa2.82□□□□□ -1.96
CLDND1-229ENST00000513988 MT1EP04732 61 aa2.81□□□□□ -1.96
CLDND1-229ENST00000513988 HERVK_113P61574 105 aa2.81□□□□□ -1.96
CLDND1-229ENST00000513988 LINC00614P0C842 121 aa2.8□□□□□ -1.96
CLDND1-229ENST00000513988 C4orf26Q17RF5 130 aa2.8□□□□□ -1.96
CLDND1-229ENST00000513988 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
CLDND1-229ENST00000513988 IFI27L1Q96BM0 104 aa2.8□□□□□ -1.96
CLDND1-229ENST00000513988 LITAFQ99732 161 aa2.8□□□□□ -1.96
CLDND1-229ENST00000513988 MT1GP13640 62 aa2.79□□□□□ -1.96
CLDND1-229ENST00000513988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.79□□□□□ -1.96
CLDND1-229ENST00000513988 SMIM11BQ8TCY0 68 aa2.79□□□□□ -1.96
CLDND1-229ENST00000513988 LINC00472Q9H8W2 130 aa2.79□□□□□ -1.96
CLDND1-229ENST00000513988 MT-ND4LP03901 98 aa2.78□□□□□ -1.96
CLDND1-229ENST00000513988 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
CLDND1-229ENST00000513988 TCTE3Q8IZS6 198 aa2.78□□□□□ -1.96
CLDND1-229ENST00000513988 V9GYY9 64 aa2.78□□□□□ -1.96
CLDND1-229ENST00000513988 TIMM17BO60830 172 aa2.76□□□□□ -1.97
CLDND1-229ENST00000513988 FABP9Q0Z7S8 132 aa2.75□□□□□ -1.97
CLDND1-229ENST00000513988 PEA15Q15121 130 aa2.75□□□□□ -1.97
CLDND1-229ENST00000513988 C7orf65Q6ZTY9 151 aa2.75□□□□□ -1.97
CLDND1-229ENST00000513988 SEC11CQ9BY50 192 aa2.75□□□□□ -1.97
CLDND1-229ENST00000513988 TRAPPC1Q9Y5R8 145 aa2.75□□□□□ -1.97
CLDND1-229ENST00000513988 K7EQZ3 153 aa2.74□□□□□ -1.97
CLDND1-229ENST00000513988 PLNP26678 52 aa2.74□□□□□ -1.97
CLDND1-229ENST00000513988 NDUFV3P56181 108 aaKnown RBP2.73□□□□□ -1.97
CLDND1-229ENST00000513988 C2orf91Q6ZV80 131 aa2.73□□□□□ -1.97
CLDND1-229ENST00000513988 MT1MQ8N339 61 aa2.73□□□□□ -1.97
CLDND1-229ENST00000513988 C18orf32Q8TCD1 76 aa2.73□□□□□ -1.97
CLDND1-229ENST00000513988 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
CLDND1-229ENST00000513988 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
CLDND1-229ENST00000513988 C12orf57Q99622 126 aa2.72□□□□□ -1.97
CLDND1-229ENST00000513988 H3BMG7 143 aa2.71□□□□□ -1.98
CLDND1-229ENST00000513988 COX19Q49B96 90 aa2.71□□□□□ -1.98
CLDND1-229ENST00000513988 TRBV7-4A0A0J9YYF1 115 aa2.7□□□□□ -1.98
CLDND1-229ENST00000513988 DPM2O94777 84 aa2.7□□□□□ -1.98
CLDND1-229ENST00000513988 Q5W150 140 aa2.7□□□□□ -1.98
CLDND1-229ENST00000513988 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
CLDND1-229ENST00000513988 HSPB8Q9UJY1 196 aa2.7□□□□□ -1.98
CLDND1-229ENST00000513988 TRGC2P03986 189 aa2.69□□□□□ -1.98
CLDND1-229ENST00000513988 COPS9Q8WXC6 57 aa2.69□□□□□ -1.98
CLDND1-229ENST00000513988 E9PLD3 99 aa2.68□□□□□ -1.98
CLDND1-229ENST00000513988 C8orf17Q9NRJ1 99 aa2.68□□□□□ -1.98
CLDND1-229ENST00000513988 NDUFB1O75438 58 aa2.67□□□□□ -1.98
CLDND1-229ENST00000513988 IGKCP01834 107 aa2.67□□□□□ -1.98
CLDND1-229ENST00000513988 PMCHL2Q9BQD1 86 aa2.66□□□□□ -1.98
CLDND1-229ENST00000513988 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
CLDND1-229ENST00000513988 LOC105371267A0A1B0GV96 52 aa2.65□□□□□ -1.99
CLDND1-229ENST00000513988 J3KT08 172 aa2.65□□□□□ -1.99
CLDND1-229ENST00000513988 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
CLDND1-229ENST00000513988 TRACP01848 142 aa2.64□□□□□ -1.99
CLDND1-229ENST00000513988 IFITM1P13164 125 aa2.64□□□□□ -1.99
CLDND1-229ENST00000513988 ANKRD29Q8N6D5 301 aa2.64□□□□□ -1.99
CLDND1-229ENST00000513988 C1orf64Q8NEQ6 169 aa2.64□□□□□ -1.99
CLDND1-229ENST00000513988 S100PP25815 95 aa2.63□□□□□ -1.99
CLDND1-229ENST00000513988 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
CLDND1-229ENST00000513988 NDUFS5O43920 106 aa2.62□□□□□ -1.99
CLDND1-229ENST00000513988 CHCHD1Q96BP2 118 aaKnown RBP2.62□□□□□ -1.99
CLDND1-229ENST00000513988 FABP2P12104 132 aa2.61□□□□□ -1.99
CLDND1-229ENST00000513988 MUSTN1Q8IVN3 82 aa2.61□□□□□ -1.99
CLDND1-229ENST00000513988 PRAC1Q96KF2 57 aa2.61□□□□□ -1.99
CLDND1-229ENST00000513988 CCKP06307 115 aa2.6□□□□□ -1.99
CLDND1-229ENST00000513988 BVES-AS1Q5T3Y7 98 aa2.6□□□□□ -1.99
CLDND1-229ENST00000513988 SCGB1D4Q6XE38 83 aa2.6□□□□□ -1.99
CLDND1-229ENST00000513988 HIST1H4GQ99525 98 aa2.6□□□□□ -1.99
CLDND1-229ENST00000513988 OCR1Q9BZK8 76 aa2.6□□□□□ -1.99
CLDND1-229ENST00000513988 R4GN34 69 aa2.6□□□□□ -1.99
CLDND1-229ENST00000513988 FAM240AA0A1B0GVK7 77 aa2.59□□□□□ -1.99
CLDND1-229ENST00000513988 SNCGO76070 127 aa2.59□□□□□ -1.99
CLDND1-229ENST00000513988 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms