RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CD164Q04900 197 aa7.34□□□□□ -1.23
SPCS3-204ENST00000513139 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
SPCS3-204ENST00000513139 SSPOA2VEC9 5147 aa7.33□□□□□ -1.24
SPCS3-204ENST00000513139 ANKRD29Q8N6D5 301 aa7.33□□□□□ -1.24
SPCS3-204ENST00000513139 SPCS1Q9Y6A9 102 aa7.33□□□□□ -1.24
SPCS3-204ENST00000513139 MTURNQ8N3F0 131 aa7.32□□□□□ -1.24
SPCS3-204ENST00000513139 Q5XG85 94 aa7.3□□□□□ -1.24
SPCS3-204ENST00000513139 USH2AO75445 5202 aa7.3□□□□□ -1.24
SPCS3-204ENST00000513139 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
SPCS3-204ENST00000513139 TRBV7-7A0A0K0K1E9 115 aa7.28□□□□□ -1.24
SPCS3-204ENST00000513139 A0A1W2PNM2 257 aa7.28□□□□□ -1.24
SPCS3-204ENST00000513139 RBM3P98179 157 aaKnown RBP7.28□□□□□ -1.24
SPCS3-204ENST00000513139 KRTAP9-8Q9BYQ0 159 aa7.28□□□□□ -1.24
SPCS3-204ENST00000513139 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
SPCS3-204ENST00000513139 K7EP34 96 aa7.27□□□□□ -1.25
SPCS3-204ENST00000513139 C1orf195Q5TG92 126 aa7.27□□□□□ -1.25
SPCS3-204ENST00000513139 TEN1Q86WV5 123 aa7.26□□□□□ -1.25
SPCS3-204ENST00000513139 TRBV7-4A0A0J9YYF1 115 aa7.25□□□□□ -1.25
SPCS3-204ENST00000513139 Q6Q795 121 aa7.25□□□□□ -1.25
SPCS3-204ENST00000513139 H3BT86 120 aa7.24□□□□□ -1.25
SPCS3-204ENST00000513139 DSCR8Q96T75 97 aa7.24□□□□□ -1.25
SPCS3-204ENST00000513139 CCKP06307 115 aa7.23□□□□□ -1.25
SPCS3-204ENST00000513139 PRO0461Q9UI25 63 aa7.23□□□□□ -1.25
SPCS3-204ENST00000513139 A0A087WSZ3 146 aa7.22□□□□□ -1.25
SPCS3-204ENST00000513139 JMJD7-PLA2G4BH0Y9G9 81 aa7.22□□□□□ -1.25
SPCS3-204ENST00000513139 OBSCN-AS1Q96MR7 158 aa7.22□□□□□ -1.25
SPCS3-204ENST00000513139 VPS25Q9BRG1 176 aa7.22□□□□□ -1.25
SPCS3-204ENST00000513139 GTF2H5Q6ZYL4 71 aa7.21□□□□□ -1.26
SPCS3-204ENST00000513139 C14orf132Q9NPU4 83 aa7.21□□□□□ -1.26
SPCS3-204ENST00000513139 MACF1Q9UPN3 7388 aaKnown RBP7.19□□□□□ -1.26
SPCS3-204ENST00000513139 Q6ZQT0 140 aa7.19□□□□□ -1.26
SPCS3-204ENST00000513139 LOC110117498A0A087WWA1 95 aa7.18□□□□□ -1.26
SPCS3-204ENST00000513139 LCE5AQ5TCM9 118 aa7.16□□□□□ -1.26
SPCS3-204ENST00000513139 ATP11AUNQ6ZP68 121 aa7.16□□□□□ -1.26
SPCS3-204ENST00000513139 SS18L2Q9UHA2 77 aa7.16□□□□□ -1.26
SPCS3-204ENST00000513139 A0A1B0GV90 55 aa7.14□□□□□ -1.27
SPCS3-204ENST00000513139 PDE6GP18545 87 aa7.14□□□□□ -1.27
SPCS3-204ENST00000513139 Q96NJ1 140 aa7.14□□□□□ -1.27
SPCS3-204ENST00000513139 F8W1H4 67 aa7.13□□□□□ -1.27
SPCS3-204ENST00000513139 Q75L30 129 aa7.13□□□□□ -1.27
SPCS3-204ENST00000513139 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
SPCS3-204ENST00000513139 DEFB116Q30KQ4 102 aa7.12□□□□□ -1.27
SPCS3-204ENST00000513139 MT2AP02795 61 aa7.11□□□□□ -1.27
SPCS3-204ENST00000513139 LINC00472Q9H8W2 130 aa7.1□□□□□ -1.27
SPCS3-204ENST00000513139 ETDBQ3ZM63 59 aa7.09□□□□□ -1.27
SPCS3-204ENST00000513139 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
SPCS3-204ENST00000513139 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
SPCS3-204ENST00000513139 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
SPCS3-204ENST00000513139 A0A1B0GW54 56 aa7.06□□□□□ -1.28
SPCS3-204ENST00000513139 PCP4P48539 62 aa7.06□□□□□ -1.28
SPCS3-204ENST00000513139 LINC00846Q9NV44 126 aa7.06□□□□□ -1.28
SPCS3-204ENST00000513139 SIGMAR1Q99720 223 aa7.05□□□□□ -1.28
SPCS3-204ENST00000513139 MT1FP04733 61 aa7.04□□□□□ -1.28
SPCS3-204ENST00000513139 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
SPCS3-204ENST00000513139 NREPQ16612 68 aa7.03□□□□□ -1.28
SPCS3-204ENST00000513139 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
SPCS3-204ENST00000513139 DSCR10P59022 87 aa7□□□□□ -1.29
SPCS3-204ENST00000513139 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
SPCS3-204ENST00000513139 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
SPCS3-204ENST00000513139 IGHV6-1A0A0B4J1U7 121 aa6.98□□□□□ -1.29
SPCS3-204ENST00000513139 J3KT08 172 aa6.98□□□□□ -1.29
SPCS3-204ENST00000513139 C20orf166-AS1Q96NR2 134 aa6.97□□□□□ -1.29
SPCS3-204ENST00000513139 LINC00313P59037 77 aa6.96□□□□□ -1.3
SPCS3-204ENST00000513139 KRTAP6-3Q3LI67 103 aa6.96□□□□□ -1.3
SPCS3-204ENST00000513139 Q6ZVQ6 151 aa6.96□□□□□ -1.3
SPCS3-204ENST00000513139 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
SPCS3-204ENST00000513139 IGKV3D-7A0A0C4DH55 119 aa6.94□□□□□ -1.3
SPCS3-204ENST00000513139 A8MUU9 505 aa6.94□□□□□ -1.3
SPCS3-204ENST00000513139 A8MWP4 228 aa6.93□□□□□ -1.3
SPCS3-204ENST00000513139 BPY2O14599 106 aa6.92□□□□□ -1.3
SPCS3-204ENST00000513139 NDUFB1O75438 58 aa6.92□□□□□ -1.3
SPCS3-204ENST00000513139 FAM236DA0A1B0GTK5 79 aa6.91□□□□□ -1.3
SPCS3-204ENST00000513139 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
SPCS3-204ENST00000513139 FAM236CP0DP71 79 aa6.91□□□□□ -1.3
SPCS3-204ENST00000513139 UBL5Q9BZL1 73 aa6.91□□□□□ -1.3
SPCS3-204ENST00000513139 PRR15Q8IV56 129 aa6.9□□□□□ -1.3
SPCS3-204ENST00000513139 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
SPCS3-204ENST00000513139 K7EQZ3 153 aa6.89□□□□□ -1.31
SPCS3-204ENST00000513139 Q8N9L7 120 aa6.88□□□□□ -1.31
SPCS3-204ENST00000513139 C8orf17Q9NRJ1 99 aa6.88□□□□□ -1.31
SPCS3-204ENST00000513139 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
SPCS3-204ENST00000513139 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
SPCS3-204ENST00000513139 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
SPCS3-204ENST00000513139 ACYP1P07311 99 aa6.85□□□□□ -1.31
SPCS3-204ENST00000513139 FAM240AA0A1B0GVK7 77 aa6.84□□□□□ -1.31
SPCS3-204ENST00000513139 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
SPCS3-204ENST00000513139 HRES1P13985 223 aa6.81□□□□□ -1.32
SPCS3-204ENST00000513139 CXCL6P80162 114 aa6.79□□□□□ -1.32
SPCS3-204ENST00000513139 hDV103S1A0JD37 113 aa6.78□□□□□ -1.32
SPCS3-204ENST00000513139 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
SPCS3-204ENST00000513139 Q8N9P0 234 aaPredicted RBP6.78□□□□□ -1.32
SPCS3-204ENST00000513139 TMEM254Q8TBM7 123 aa6.77□□□□□ -1.33
SPCS3-204ENST00000513139 MRPL34Q9BQ48 92 aaKnown RBP6.77□□□□□ -1.33
SPCS3-204ENST00000513139 J3QR89 54 aa6.75□□□□□ -1.33
SPCS3-204ENST00000513139 CASC2Q6XLA1 102 aa6.75□□□□□ -1.33
SPCS3-204ENST00000513139 NEBP20929 6669 aa6.74□□□□□ -1.33
SPCS3-204ENST00000513139 HCG22E2RYF7 251 aa6.73□□□□□ -1.33
SPCS3-204ENST00000513139 LINC00643Q86TS7 51 aa6.73□□□□□ -1.33
SPCS3-204ENST00000513139 NDUFS5O43920 106 aa6.72□□□□□ -1.33
SPCS3-204ENST00000513139 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms