RNA–Protein interactions for RNA: ENST00000512215.5

PPP3CA-207, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-207ENST00000512215 Q6ZR54 194 aa9.45□□□□□ -0.9
PPP3CA-207ENST00000512215 C8orf17Q9NRJ1 99 aa9.43□□□□□ -0.9
PPP3CA-207ENST00000512215 PLAC8Q9NZF1 115 aa9.43□□□□□ -0.9
PPP3CA-207ENST00000512215 SPINK1P00995 79 aa9.41□□□□□ -0.9
PPP3CA-207ENST00000512215 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
PPP3CA-207ENST00000512215 ZCCHC13Q8WW36 166 aaKnown RBP9.39□□□□□ -0.91
PPP3CA-207ENST00000512215 A0A1B0GVX0 72 aa9.39□□□□□ -0.91
PPP3CA-207ENST00000512215 LCE6AA0A183 80 aa9.39□□□□□ -0.91
PPP3CA-207ENST00000512215 ASB16-AS1Q495Z4 193 aa9.38□□□□□ -0.91
PPP3CA-207ENST00000512215 MRPL34Q9BQ48 92 aaKnown RBP9.38□□□□□ -0.91
PPP3CA-207ENST00000512215 Q96NJ1 140 aa9.36□□□□□ -0.91
PPP3CA-207ENST00000512215 SSBP3-AS1Q7Z2R9 100 aa9.35□□□□□ -0.91
PPP3CA-207ENST00000512215 C9orf92A6NGG3 77 aa9.35□□□□□ -0.91
PPP3CA-207ENST00000512215 SPANXA2-OT1Q8N9U9 137 aa9.34□□□□□ -0.91
PPP3CA-207ENST00000512215 SPRR1BP22528 89 aa9.32□□□□□ -0.92
PPP3CA-207ENST00000512215 LINC00472Q9H8W2 130 aa9.31□□□□□ -0.92
PPP3CA-207ENST00000512215 MEGF8Q7Z7M0 2845 aa9.31□□□□□ -0.92
PPP3CA-207ENST00000512215 TP53AIP1Q9HCN2 124 aa9.3□□□□□ -0.92
PPP3CA-207ENST00000512215 FAM229AH3BQW9 127 aa9.28□□□□□ -0.92
PPP3CA-207ENST00000512215 SEC61BP60468 96 aaKnown RBP9.28□□□□□ -0.92
PPP3CA-207ENST00000512215 LINC00304Q8N9R0 145 aa9.28□□□□□ -0.92
PPP3CA-207ENST00000512215 IGLV8-61A0A075B6I0 122 aa9.28□□□□□ -0.92
PPP3CA-207ENST00000512215 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
PPP3CA-207ENST00000512215 A0A087X002 238 aa9.27□□□□□ -0.93
PPP3CA-207ENST00000512215 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
PPP3CA-207ENST00000512215 MMP24-AS1A0A0U1RRL7 71 aa9.26□□□□□ -0.93
PPP3CA-207ENST00000512215 COA5Q86WW8 74 aa9.25□□□□□ -0.93
PPP3CA-207ENST00000512215 NOTCH2NLQ7Z3S9 236 aa9.23□□□□□ -0.93
PPP3CA-207ENST00000512215 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
PPP3CA-207ENST00000512215 H3BPC8 53 aa9.22□□□□□ -0.93
PPP3CA-207ENST00000512215 SPINK7P58062 85 aa9.2□□□□□ -0.94
PPP3CA-207ENST00000512215 KRTAP13-1Q8IUC0 172 aa9.17□□□□□ -0.94
PPP3CA-207ENST00000512215 ANK2Q01484 3957 aa9.16□□□□□ -0.94
PPP3CA-207ENST00000512215 CSAG1Q6PB30 78 aa9.14□□□□□ -0.95
PPP3CA-207ENST00000512215 HUWE1Q7Z6Z7 4374 aaKnown RBP9.12□□□□□ -0.95
PPP3CA-207ENST00000512215 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
PPP3CA-207ENST00000512215 Q8N1X5 172 aa9.09□□□□□ -0.95
PPP3CA-207ENST00000512215 KRTAP29-1A8MX34 341 aaPredicted RBP9.07□□□□□ -0.96
PPP3CA-207ENST00000512215 ACYP2P14621 99 aa9.07□□□□□ -0.96
PPP3CA-207ENST00000512215 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
PPP3CA-207ENST00000512215 ROMO1P60602 79 aa9.02□□□□□ -0.96
PPP3CA-207ENST00000512215 IGLV7-46A0A075B6I9 117 aa9.01□□□□□ -0.97
PPP3CA-207ENST00000512215 Q5W150 140 aa9□□□□□ -0.97
PPP3CA-207ENST00000512215 HRES1P13985 223 aa8.98□□□□□ -0.97
PPP3CA-207ENST00000512215 MIR22HGQ0VDD5 57 aa8.98□□□□□ -0.97
PPP3CA-207ENST00000512215 CMYA5Q8N3K9 4069 aa8.97□□□□□ -0.97
PPP3CA-207ENST00000512215 A0A1B0GU69 56 aa8.96□□□□□ -0.98
PPP3CA-207ENST00000512215 DNHD1Q96M86 4753 aa8.95□□□□□ -0.98
PPP3CA-207ENST00000512215 Q5VSD8 79 aa8.92□□□□□ -0.98
PPP3CA-207ENST00000512215 DNAH9Q9NYC9 4486 aa8.9□□□□□ -0.99
PPP3CA-207ENST00000512215 DNAH10Q8IVF4 4471 aa8.88□□□□□ -0.99
PPP3CA-207ENST00000512215 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
PPP3CA-207ENST00000512215 Q6ZSA8 131 aa8.85□□□□□ -0.99
PPP3CA-207ENST00000512215 KRTAP21-3Q3LHN1 58 aa8.85□□□□□ -0.99
PPP3CA-207ENST00000512215 SPATA8Q6RVD6 105 aa8.84□□□□□ -0.99
PPP3CA-207ENST00000512215 PLECQ15149 4684 aaKnown RBP8.84□□□□□ -0.99
PPP3CA-207ENST00000512215 UQCR11O14957 56 aa8.82□□□□□ -1
PPP3CA-207ENST00000512215 KRTAP1-4P0C5Y4 121 aa8.81□□□□□ -1
PPP3CA-207ENST00000512215 LYSTQ99698 3801 aa8.79□□□□□ -1
PPP3CA-207ENST00000512215 DNAH3Q8TD57 4116 aa8.78□□□□□ -1
PPP3CA-207ENST00000512215 PRKDCP78527 4128 aaKnown RBP8.76□□□□□ -1.01
PPP3CA-207ENST00000512215 KRTAP25-1Q3LHN0 102 aa8.75□□□□□ -1.01
PPP3CA-207ENST00000512215 STARD9Q9P2P6 4700 aa8.68□□□□□ -1.02
PPP3CA-207ENST00000512215 K7ERS5 55 aa8.64□□□□□ -1.03
PPP3CA-207ENST00000512215 P0C880 135 aa8.6□□□□□ -1.03
PPP3CA-207ENST00000512215 DNAH11Q96DT5 4516 aa8.6□□□□□ -1.03
PPP3CA-207ENST00000512215 DNAH1Q9P2D7 4330 aa8.59□□□□□ -1.03
PPP3CA-207ENST00000512215 DNAH7Q8WXX0 4024 aa8.58□□□□□ -1.04
PPP3CA-207ENST00000512215 SPINT4Q6UDR6 99 aa8.57□□□□□ -1.04
PPP3CA-207ENST00000512215 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
PPP3CA-207ENST00000512215 A0A0D9SG42 100 aa8.57□□□□□ -1.04
PPP3CA-207ENST00000512215 LUZP6Q538Z0 58 aa8.56□□□□□ -1.04
PPP3CA-207ENST00000512215 NDUFAF8A1L188 74 aa8.55□□□□□ -1.04
PPP3CA-207ENST00000512215 C20orf166-AS1Q96NR2 134 aa8.55□□□□□ -1.04
PPP3CA-207ENST00000512215 KMT2AQ03164 3969 aa8.54□□□□□ -1.04
PPP3CA-207ENST00000512215 A8MUU9 505 aa8.52□□□□□ -1.04
PPP3CA-207ENST00000512215 COX6B2Q6YFQ2 88 aa8.51□□□□□ -1.05
PPP3CA-207ENST00000512215 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
PPP3CA-207ENST00000512215 VPS13DQ5THJ4 4388 aa8.41□□□□□ -1.06
PPP3CA-207ENST00000512215 A0A1B0GU33 70 aa8.4□□□□□ -1.06
PPP3CA-207ENST00000512215 RPS29P62273 56 aaKnown RBP8.4□□□□□ -1.06
PPP3CA-207ENST00000512215 DNAH5Q8TE73 4624 aa8.39□□□□□ -1.07
PPP3CA-207ENST00000512215 FAT1Q14517 4588 aa8.38□□□□□ -1.07
PPP3CA-207ENST00000512215 S4R3F8 94 aa8.32□□□□□ -1.08
PPP3CA-207ENST00000512215 LRP1BQ9NZR2 4599 aa8.31□□□□□ -1.08
PPP3CA-207ENST00000512215 DYNC2H1Q8NCM8 4307 aaKnown RBP8.31□□□□□ -1.08
PPP3CA-207ENST00000512215 KRTAP13-3Q3SY46 172 aa8.31□□□□□ -1.08
PPP3CA-207ENST00000512215 DNAH8Q96JB1 4490 aa8.28□□□□□ -1.08
PPP3CA-207ENST00000512215 CRIPTQ9P021 101 aa8.28□□□□□ -1.08
PPP3CA-207ENST00000512215 RPL37P61927 97 aaKnown RBP8.26□□□□□ -1.09
PPP3CA-207ENST00000512215 XP32Q5T750 250 aa8.26□□□□□ -1.09
PPP3CA-207ENST00000512215 DNAH17Q9UFH2 4485 aa8.24□□□□□ -1.09
PPP3CA-207ENST00000512215 DNAH2Q9P225 4427 aa8.24□□□□□ -1.09
PPP3CA-207ENST00000512215 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
PPP3CA-207ENST00000512215 FRAS1Q86XX4 4008 aa8.2□□□□□ -1.1
PPP3CA-207ENST00000512215 DNAH6Q9C0G6 4158 aa8.19□□□□□ -1.1
PPP3CA-207ENST00000512215 DYNC1H1Q14204 4646 aaKnown RBP8.18□□□□□ -1.1
PPP3CA-207ENST00000512215 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
PPP3CA-207ENST00000512215 H1FX-AS1Q4G0G2 97 aa8.15□□□□□ -1.11
PPP3CA-207ENST00000512215 HYDINQ4G0P3 5121 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms