RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 PDZD2O15018 2839 aa0.79□□□□□ -2.28
CALCOCO2-220ENST00000511816 NCOR1O75376 2440 aa0.79□□□□□ -2.28
CALCOCO2-220ENST00000511816 UNC79Q9P2D8 2635 aa0.79□□□□□ -2.28
CALCOCO2-220ENST00000511816 CHD7Q9P2D1 2997 aa0.78□□□□□ -2.28
CALCOCO2-220ENST00000511816 PTPN13Q12923 2485 aa0.78□□□□□ -2.28
CALCOCO2-220ENST00000511816 ZFYVE26Q68DK2 2539 aa0.77□□□□□ -2.29
CALCOCO2-220ENST00000511816 PKD1L1Q8TDX9 2849 aa0.77□□□□□ -2.29
CALCOCO2-220ENST00000511816 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
CALCOCO2-220ENST00000511816 MAP1BP46821 2468 aaKnown RBP0.77□□□□□ -2.29
CALCOCO2-220ENST00000511816 NF1P21359 2839 aa0.76□□□□□ -2.29
CALCOCO2-220ENST00000511816 FAT2Q9NYQ8 4349 aa0.76□□□□□ -2.29
CALCOCO2-220ENST00000511816 DEFB110Q30KQ9 67 aa0.76□□□□□ -2.29
CALCOCO2-220ENST00000511816 BSNQ9UPA5 3926 aa0.75□□□□□ -2.29
CALCOCO2-220ENST00000511816 GCN1Q92616 2671 aaKnown RBP0.75□□□□□ -2.29
CALCOCO2-220ENST00000511816 K7EIM0 57 aa0.75□□□□□ -2.29
CALCOCO2-220ENST00000511816 SPART-AS1P0CW21 52 aa0.75□□□□□ -2.29
CALCOCO2-220ENST00000511816 SETXQ7Z333 2677 aaKnown RBP0.75□□□□□ -2.29
CALCOCO2-220ENST00000511816 HIVEP3Q5T1R4 2406 aa0.75□□□□□ -2.29
CALCOCO2-220ENST00000511816 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
CALCOCO2-220ENST00000511816 WNK1Q9H4A3 2382 aa0.75□□□□□ -2.29
CALCOCO2-220ENST00000511816 COL6A5A8TX70 2615 aa0.74□□□□□ -2.29
CALCOCO2-220ENST00000511816 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
CALCOCO2-220ENST00000511816 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
CALCOCO2-220ENST00000511816 SETD2Q9BYW2 2564 aaPredicted RBP0.73□□□□□ -2.29
CALCOCO2-220ENST00000511816 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
CALCOCO2-220ENST00000511816 NBASA2RRP1 2371 aa0.73□□□□□ -2.29
CALCOCO2-220ENST00000511816 NAV2Q8IVL1 2488 aa0.73□□□□□ -2.29
CALCOCO2-220ENST00000511816 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
CALCOCO2-220ENST00000511816 CRYBG3Q68DQ2 2970 aa0.72□□□□□ -2.29
CALCOCO2-220ENST00000511816 TMEM167AQ8TBQ9 72 aa0.72□□□□□ -2.29
CALCOCO2-220ENST00000511816 LYSTQ99698 3801 aa0.72□□□□□ -2.29
CALCOCO2-220ENST00000511816 ZZEF1O43149 2961 aa0.71□□□□□ -2.3
CALCOCO2-220ENST00000511816 FLNCQ14315 2725 aa0.71□□□□□ -2.3
CALCOCO2-220ENST00000511816 USP24Q9UPU5 2620 aa0.71□□□□□ -2.3
CALCOCO2-220ENST00000511816 VPS13BQ7Z7G8 4022 aa0.71□□□□□ -2.3
CALCOCO2-220ENST00000511816 NSD1Q96L73 2696 aaPredicted RBP0.7□□□□□ -2.3
CALCOCO2-220ENST00000511816 ACANP16112 2415 aa0.7□□□□□ -2.3
CALCOCO2-220ENST00000511816 DNAH11Q96DT5 4516 aa0.7□□□□□ -2.3
CALCOCO2-220ENST00000511816 SACSQ9NZJ4 4579 aa0.69□□□□□ -2.3
CALCOCO2-220ENST00000511816 TACC2O95359 2948 aa0.69□□□□□ -2.3
CALCOCO2-220ENST00000511816 KMT2AQ03164 3969 aa0.69□□□□□ -2.3
CALCOCO2-220ENST00000511816 DMXL1Q9Y485 3027 aa0.69□□□□□ -2.3
CALCOCO2-220ENST00000511816 TENM2Q9NT68 2774 aa0.68□□□□□ -2.3
CALCOCO2-220ENST00000511816 MYCBP2O75592 4640 aa0.68□□□□□ -2.3
CALCOCO2-220ENST00000511816 DMBT1Q9UGM3 2413 aaPredicted RBP0.68□□□□□ -2.3
CALCOCO2-220ENST00000511816 SPRR2DP22532 72 aa0.68□□□□□ -2.3
CALCOCO2-220ENST00000511816 FRYQ5TBA9 3013 aa0.68□□□□□ -2.3
CALCOCO2-220ENST00000511816 SPTBN4Q9H254 2564 aa0.68□□□□□ -2.3
CALCOCO2-220ENST00000511816 PKD1P98161 4303 aa0.67□□□□□ -2.3
CALCOCO2-220ENST00000511816 CCDC168Q8NDH2 2452 aa0.67□□□□□ -2.3
CALCOCO2-220ENST00000511816 ACACAQ13085 2346 aa0.67□□□□□ -2.3
CALCOCO2-220ENST00000511816 MTORP42345 2549 aa0.67□□□□□ -2.3
CALCOCO2-220ENST00000511816 FLNBO75369 2602 aaKnown RBP0.67□□□□□ -2.3
CALCOCO2-220ENST00000511816 ANKRD11Q6UB99 2663 aaPredicted RBP0.66□□□□□ -2.3
CALCOCO2-220ENST00000511816 RPL39P5Q59GN2 51 aa0.66□□□□□ -2.3
CALCOCO2-220ENST00000511816 UTP20O75691 2785 aaKnown RBP0.66□□□□□ -2.3
CALCOCO2-220ENST00000511816 VPS13DQ5THJ4 4388 aa0.66□□□□□ -2.3
CALCOCO2-220ENST00000511816 RANBP2P49792 3224 aaKnown RBP0.65□□□□□ -2.31
CALCOCO2-220ENST00000511816 STAB1Q9NY15 2570 aa0.65□□□□□ -2.31
CALCOCO2-220ENST00000511816 APC2O95996 2303 aa0.65□□□□□ -2.31
CALCOCO2-220ENST00000511816 DNAH3Q8TD57 4116 aa0.65□□□□□ -2.31
CALCOCO2-220ENST00000511816 USP9YO00507 2555 aaPredicted RBP0.64□□□□□ -2.31
CALCOCO2-220ENST00000511816 EPG5Q9HCE0 2579 aa0.64□□□□□ -2.31
CALCOCO2-220ENST00000511816 SPRR2BP35325 72 aa0.64□□□□□ -2.31
CALCOCO2-220ENST00000511816 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
CALCOCO2-220ENST00000511816 KALRNO60229 2985 aa0.64□□□□□ -2.31
CALCOCO2-220ENST00000511816 DCHS2Q6V1P9 2916 aa0.64□□□□□ -2.31
CALCOCO2-220ENST00000511816 LRRK2Q5S007 2527 aa0.64□□□□□ -2.31
CALCOCO2-220ENST00000511816 ITPR3Q14573 2671 aa0.63□□□□□ -2.31
CALCOCO2-220ENST00000511816 DNAH2Q9P225 4427 aa0.63□□□□□ -2.31
CALCOCO2-220ENST00000511816 RIF1Q5UIP0 2472 aaKnown RBP0.63□□□□□ -2.31
CALCOCO2-220ENST00000511816 COL12A1Q99715 3063 aa0.63□□□□□ -2.31
CALCOCO2-220ENST00000511816 DYNC2H1Q8NCM8 4307 aaKnown RBP0.62□□□□□ -2.31
CALCOCO2-220ENST00000511816 CACNA1AO00555 2505 aa0.62□□□□□ -2.31
CALCOCO2-220ENST00000511816 LRP1Q07954 4544 aaKnown RBP0.61□□□□□ -2.31
CALCOCO2-220ENST00000511816 HECTD4Q9Y4D8 3996 aa0.61□□□□□ -2.31
CALCOCO2-220ENST00000511816 PKHD1L1Q86WI1 4243 aa0.61□□□□□ -2.31
CALCOCO2-220ENST00000511816 ANKHD1Q8IWZ3 2542 aaKnown RBP0.61□□□□□ -2.31
CALCOCO2-220ENST00000511816 DEFB108AA8MXU0 73 aa0.61□□□□□ -2.31
CALCOCO2-220ENST00000511816 RHPN1-AS1Q9BWJ2 59 aa0.61□□□□□ -2.31
CALCOCO2-220ENST00000511816 ANK3Q12955 4377 aaKnown RBP0.61□□□□□ -2.31
CALCOCO2-220ENST00000511816 HIVEP1P15822 2718 aa0.6□□□□□ -2.31
CALCOCO2-220ENST00000511816 HSPG2P98160 4391 aa0.6□□□□□ -2.31
CALCOCO2-220ENST00000511816 COL7A1Q02388 2944 aa0.6□□□□□ -2.31
CALCOCO2-220ENST00000511816 NBEAQ8NFP9 2946 aa0.6□□□□□ -2.31
CALCOCO2-220ENST00000511816 KRTAP8-1Q8IUC2 63 aa0.6□□□□□ -2.31
CALCOCO2-220ENST00000511816 NBEAL2Q6ZNJ1 2754 aa0.6□□□□□ -2.31
CALCOCO2-220ENST00000511816 FAM186AA6NE01 2351 aa0.6□□□□□ -2.31
CALCOCO2-220ENST00000511816 NCOR2Q9Y618 2525 aa0.6□□□□□ -2.31
CALCOCO2-220ENST00000511816 LPAP08519 4548 aa0.59□□□□□ -2.31
CALCOCO2-220ENST00000511816 CUBNO60494 3623 aa0.59□□□□□ -2.31
CALCOCO2-220ENST00000511816 H3BUX3 64 aa0.59□□□□□ -2.31
CALCOCO2-220ENST00000511816 SPENQ96T58 3664 aaKnown RBP0.59□□□□□ -2.32
CALCOCO2-220ENST00000511816 HTTP42858 3142 aa0.59□□□□□ -2.32
CALCOCO2-220ENST00000511816 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.32
CALCOCO2-220ENST00000511816 HRNRQ86YZ3 2850 aaPredicted RBP0.59□□□□□ -2.32
CALCOCO2-220ENST00000511816 CELSR3Q9NYQ7 3312 aa0.58□□□□□ -2.32
CALCOCO2-220ENST00000511816 DNAH8Q96JB1 4490 aa0.58□□□□□ -2.32
CALCOCO2-220ENST00000511816 SONP18583 2426 aaKnown RBP0.58□□□□□ -2.32
CALCOCO2-220ENST00000511816 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms