RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 TENM1Q9UKZ4 2725 aa4.39□□□□□ -1.71
CPNE4-208ENST00000511604 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
CPNE4-208ENST00000511604 INAFM1C9JVW0 142 aa4.38□□□□□ -1.71
CPNE4-208ENST00000511604 NOTCH2NLQ7Z3S9 236 aa4.38□□□□□ -1.71
CPNE4-208ENST00000511604 SMR3AQ99954 134 aa4.38□□□□□ -1.71
CPNE4-208ENST00000511604 A8MUU9 505 aa4.38□□□□□ -1.71
CPNE4-208ENST00000511604 KRTAP11-1Q8IUC1 163 aa4.38□□□□□ -1.71
CPNE4-208ENST00000511604 NSD1Q96L73 2696 aaPredicted RBP4.38□□□□□ -1.71
CPNE4-208ENST00000511604 LINC00483Q53H64 154 aa4.37□□□□□ -1.71
CPNE4-208ENST00000511604 MRPL34Q9BQ48 92 aaKnown RBP4.37□□□□□ -1.71
CPNE4-208ENST00000511604 STAB1Q9NY15 2570 aa4.37□□□□□ -1.71
CPNE4-208ENST00000511604 TENM3Q9P273 2699 aa4.37□□□□□ -1.71
CPNE4-208ENST00000511604 Q96NJ1 140 aa4.37□□□□□ -1.71
CPNE4-208ENST00000511604 SPART-AS1P0CW21 52 aa4.36□□□□□ -1.71
CPNE4-208ENST00000511604 ATRQ13535 2644 aa4.35□□□□□ -1.71
CPNE4-208ENST00000511604 A0A1B0GVX0 72 aa4.34□□□□□ -1.71
CPNE4-208ENST00000511604 IGLV7-43P04211 117 aa4.34□□□□□ -1.71
CPNE4-208ENST00000511604 COL6A5A8TX70 2615 aa4.34□□□□□ -1.71
CPNE4-208ENST00000511604 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.72
CPNE4-208ENST00000511604 Q5W150 140 aa4.34□□□□□ -1.72
CPNE4-208ENST00000511604 NBEAL1Q6ZS30 2694 aa4.33□□□□□ -1.72
CPNE4-208ENST00000511604 SPRR1BP22528 89 aa4.33□□□□□ -1.72
CPNE4-208ENST00000511604 KRTAP13-3Q3SY46 172 aa4.33□□□□□ -1.72
CPNE4-208ENST00000511604 LINC00304Q8N9R0 145 aa4.33□□□□□ -1.72
CPNE4-208ENST00000511604 KRTAP24-1Q3LI83 254 aa4.31□□□□□ -1.72
CPNE4-208ENST00000511604 DNAH9Q9NYC9 4486 aa4.3□□□□□ -1.72
CPNE4-208ENST00000511604 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
CPNE4-208ENST00000511604 CDK2AP2O75956 126 aa4.29□□□□□ -1.72
CPNE4-208ENST00000511604 FLG2Q5D862 2391 aaPredicted RBP4.28□□□□□ -1.72
CPNE4-208ENST00000511604 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
CPNE4-208ENST00000511604 KRTAP1-1Q07627 177 aa4.28□□□□□ -1.72
CPNE4-208ENST00000511604 FRAS1Q86XX4 4008 aa4.28□□□□□ -1.72
CPNE4-208ENST00000511604 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
CPNE4-208ENST00000511604 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
CPNE4-208ENST00000511604 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
CPNE4-208ENST00000511604 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
CPNE4-208ENST00000511604 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
CPNE4-208ENST00000511604 IGLV9-49A0A0B4J1Y8 123 aa4.25□□□□□ -1.73
CPNE4-208ENST00000511604 H0YAA0 97 aa4.25□□□□□ -1.73
CPNE4-208ENST00000511604 H3BNG1 76 aa4.24□□□□□ -1.73
CPNE4-208ENST00000511604 LY6G6CO95867 125 aa4.23□□□□□ -1.73
CPNE4-208ENST00000511604 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
CPNE4-208ENST00000511604 ANAPC11Q9NYG5 84 aa4.23□□□□□ -1.73
CPNE4-208ENST00000511604 SSBP3-AS1Q7Z2R9 100 aa4.23□□□□□ -1.73
CPNE4-208ENST00000511604 A0A087WTM6 91 aa4.22□□□□□ -1.73
CPNE4-208ENST00000511604 NUPR2A6NF83 97 aa4.22□□□□□ -1.73
CPNE4-208ENST00000511604 Q6ZSA8 131 aa4.22□□□□□ -1.73
CPNE4-208ENST00000511604 DNAH8Q96JB1 4490 aa4.21□□□□□ -1.74
CPNE4-208ENST00000511604 PANO1I0J062 215 aa4.21□□□□□ -1.74
CPNE4-208ENST00000511604 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
CPNE4-208ENST00000511604 CMYA5Q8N3K9 4069 aa4.2□□□□□ -1.74
CPNE4-208ENST00000511604 DNAH7Q8WXX0 4024 aa4.19□□□□□ -1.74
CPNE4-208ENST00000511604 NOTCH1P46531 2555 aa4.19□□□□□ -1.74
CPNE4-208ENST00000511604 PSORS1C2Q9UIG4 136 aa4.19□□□□□ -1.74
CPNE4-208ENST00000511604 MEGF8Q7Z7M0 2845 aa4.19□□□□□ -1.74
CPNE4-208ENST00000511604 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
CPNE4-208ENST00000511604 KRTAP1-5Q9BYS1 174 aa4.19□□□□□ -1.74
CPNE4-208ENST00000511604 FAM229AH3BQW9 127 aa4.18□□□□□ -1.74
CPNE4-208ENST00000511604 KRTAP10-11P60412 298 aa4.18□□□□□ -1.74
CPNE4-208ENST00000511604 SPINK6Q6UWN8 80 aa4.18□□□□□ -1.74
CPNE4-208ENST00000511604 DNAH17Q9UFH2 4485 aa4.18□□□□□ -1.74
CPNE4-208ENST00000511604 SPINK1P00995 79 aa4.16□□□□□ -1.74
CPNE4-208ENST00000511604 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
CPNE4-208ENST00000511604 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
CPNE4-208ENST00000511604 HUWE1Q7Z6Z7 4374 aaKnown RBP4.14□□□□□ -1.75
CPNE4-208ENST00000511604 KRTAP13-1Q8IUC0 172 aa4.14□□□□□ -1.75
CPNE4-208ENST00000511604 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
CPNE4-208ENST00000511604 A0A1B0GU33 70 aa4.13□□□□□ -1.75
CPNE4-208ENST00000511604 K7ERS5 55 aa4.13□□□□□ -1.75
CPNE4-208ENST00000511604 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
CPNE4-208ENST00000511604 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
CPNE4-208ENST00000511604 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
CPNE4-208ENST00000511604 WWC2-AS2Q96NR7 200 aa4.11□□□□□ -1.75
CPNE4-208ENST00000511604 C14orf177Q52M58 125 aa4.1□□□□□ -1.75
CPNE4-208ENST00000511604 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
CPNE4-208ENST00000511604 H1FX-AS1Q4G0G2 97 aa4.1□□□□□ -1.75
CPNE4-208ENST00000511604 MGAM2Q2M2H8 2515 aa4.09□□□□□ -1.76
CPNE4-208ENST00000511604 TGP01266 2768 aa4.07□□□□□ -1.76
CPNE4-208ENST00000511604 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.07□□□□□ -1.76
CPNE4-208ENST00000511604 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
CPNE4-208ENST00000511604 VPS13DQ5THJ4 4388 aa4.06□□□□□ -1.76
CPNE4-208ENST00000511604 KMT2AQ03164 3969 aa4.05□□□□□ -1.76
CPNE4-208ENST00000511604 NBDYA0A0U1RRE5 68 aa4.05□□□□□ -1.76
CPNE4-208ENST00000511604 Q8N1X5 172 aa4.05□□□□□ -1.76
CPNE4-208ENST00000511604 PLECQ15149 4684 aaKnown RBP4.05□□□□□ -1.76
CPNE4-208ENST00000511604 DNAH3Q8TD57 4116 aa4.04□□□□□ -1.76
CPNE4-208ENST00000511604 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
CPNE4-208ENST00000511604 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
CPNE4-208ENST00000511604 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
CPNE4-208ENST00000511604 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.76
CPNE4-208ENST00000511604 HECTD4Q9Y4D8 3996 aa4.01□□□□□ -1.77
CPNE4-208ENST00000511604 STAB2Q8WWQ8 2551 aa4.01□□□□□ -1.77
CPNE4-208ENST00000511604 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
CPNE4-208ENST00000511604 KRTAP3-2Q9BYR7 98 aa4□□□□□ -1.77
CPNE4-208ENST00000511604 COX6B2Q6YFQ2 88 aa3.99□□□□□ -1.77
CPNE4-208ENST00000511604 DNAH2Q9P225 4427 aa3.98□□□□□ -1.77
CPNE4-208ENST00000511604 KMT2CQ8NEZ4 4911 aaKnown RBP3.98□□□□□ -1.77
CPNE4-208ENST00000511604 RYR3Q15413 4870 aa3.98□□□□□ -1.77
CPNE4-208ENST00000511604 PRKDCP78527 4128 aaKnown RBP3.97□□□□□ -1.77
CPNE4-208ENST00000511604 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms