RNA–Protein interactions for RNA: ENST00000510921.5

CCNH-208, Transcript of cyclin H, human

TSL 4

Gene CCNH, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-208	ENST00000510921	UTP20	O75691	2785 aa	Known RBP	0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	PRRC2C	Q9Y520	2896 aa	Known RBP	0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	PRB3	Q04118	309 aa	Predicted RBP	0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	WFDC10B	Q8IUB3	73 aa		0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	WFDC13	Q8IUB5	93 aa		0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	ALMS1	Q8TCU4	4167 aa		0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	MUC3A	Q02505	3323 aa		0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	ASXL3	Q9C0F0	2248 aa		0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	CSMD1	Q96PZ7	3565 aa		0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	VPS13D	Q5THJ4	4388 aa		0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	WNK2	Q9Y3S1	2297 aa		0.66	□□□□□ -2.3
CCNH-208	ENST00000510921	FAM186A	A6NE01	2351 aa		0.65	□□□□□ -2.3
CCNH-208	ENST00000510921		A0A096LPF7	62 aa		0.65	□□□□□ -2.31
CCNH-208	ENST00000510921	NBDY	A0A0U1RRE5	68 aa		0.65	□□□□□ -2.31
CCNH-208	ENST00000510921	SPTBN2	O15020	2390 aa		0.65	□□□□□ -2.31
CCNH-208	ENST00000510921	SETX	Q7Z333	2677 aa	Known RBP	0.65	□□□□□ -2.31
CCNH-208	ENST00000510921	CNTRL	Q7Z7A1	2325 aa		0.65	□□□□□ -2.31
CCNH-208	ENST00000510921	EYS	Q5T1H1	3165 aa		0.65	□□□□□ -2.31
CCNH-208	ENST00000510921	ANKRD17	O75179	2603 aa	Known RBP	0.65	□□□□□ -2.31
CCNH-208	ENST00000510921	MXRA5	Q9NR99	2828 aa		0.65	□□□□□ -2.31
CCNH-208	ENST00000510921	ABCA4	P78363	2273 aa		0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	AHCTF1	Q8WYP5	2266 aa		0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	ANK3	Q12955	4377 aa	Known RBP	0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	MYO7A	Q13402	2215 aa		0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	DNAH17	Q9UFH2	4485 aa		0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	HTN1	P15515	57 aa		0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	RPS29	P62273	56 aa	Known RBP	0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	C10orf99	Q6UWK7	81 aa		0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	URB1	O60287	2271 aa	Known RBP	0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	KIAA0100	Q14667	2235 aa	Known RBP	0.64	□□□□□ -2.31
CCNH-208	ENST00000510921	VPS13C	Q709C8	3753 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	SPTBN1	Q01082	2364 aa	Known RBP	0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	TRRAP	Q9Y4A5	3859 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	ZNF292	O60281	2723 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	BDP1	A6H8Y1	2624 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	LAMA5	O15230	3695 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	EP300	Q09472	2414 aa	Predicted RBP	0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	PTPRQ	Q9UMZ3	2332 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	SPART-AS1	P0CW21	52 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	H1FX-AS1	Q4G0G2	97 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	CRYBG3	Q68DQ2	2970 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	DEFB123	Q8N688	67 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	LYST	Q99698	3801 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	C2CD3	Q4AC94	2353 aa		0.63	□□□□□ -2.31
CCNH-208	ENST00000510921	ITPR1	Q14643	2758 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	FBN2	P35556	2912 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	TLN1	Q9Y490	2541 aa	Known RBP	0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	TENM2	Q9NT68	2774 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	DEFB130B	P0DP73	79 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	DEFB130A	P0DP74	79 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	RPL37	P61927	97 aa	Known RBP	0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	DEFB136	Q30KP8	78 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	DEFB105A	Q8NG35	78 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	KNL1	Q8NG31	2342 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	DYNC2H1	Q8NCM8	4307 aa	Known RBP	0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	ANK2	Q01484	3957 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	SPTBN4	Q9H254	2564 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	DOPEY1	Q5JWR5	2465 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	TPR	P12270	2363 aa	Known RBP	0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	TENM4	Q6N022	2769 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	NCOR1	O75376	2440 aa		0.62	□□□□□ -2.31
CCNH-208	ENST00000510921	VWF	P04275	2813 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	DNAJC13	O75165	2243 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	CFAP46	Q8IYW2	2715 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921		A0A096LNI7	61 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	PRLH	P81277	87 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	SSBP3-AS1	Q7Z2R9	100 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	CEP250	Q9BV73	2442 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	ABCA2	Q9BZC7	2435 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	DNAH8	Q96JB1	4490 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	CSMD2	Q7Z408	3487 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	HIVEP1	P15822	2718 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	RIF1	Q5UIP0	2472 aa	Known RBP	0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	CNOT1	A5YKK6	2376 aa	Known RBP	0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	UBR5	O95071	2799 aa	Predicted RBP	0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	NBEAL2	Q6ZNJ1	2754 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	SRRM2	Q9UQ35	2752 aa	Known RBP	0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	MYO9A	B2RTY4	2548 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	ITPR3	Q14573	2671 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	PKDREJ	Q9NTG1	2253 aa		0.61	□□□□□ -2.31
CCNH-208	ENST00000510921	GVINP1	Q7Z2Y8	2422 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	NOTCH1	P46531	2555 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	SPTAN1	Q13813	2472 aa	Known RBP	0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	CACNA1H	O95180	2353 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	ZNF462	Q96JM2	2506 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	GCN1	Q92616	2671 aa	Known RBP	0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	APC	P25054	2843 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	ZAN	Q9Y493	2812 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	PLAC4	Q8WY50	150 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	HECTD4	Q9Y4D8	3996 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	DNAH3	Q8TD57	4116 aa		0.6	□□□□□ -2.31
CCNH-208	ENST00000510921	EPG5	Q9HCE0	2579 aa		0.59	□□□□□ -2.31
CCNH-208	ENST00000510921	CEP295	Q9C0D2	2601 aa		0.59	□□□□□ -2.31
CCNH-208	ENST00000510921	APC2	O95996	2303 aa		0.59	□□□□□ -2.31
CCNH-208	ENST00000510921	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	0.59	□□□□□ -2.31	8e-8	■■□□□ 11.7
CCNH-208	ENST00000510921	CSMD3	Q7Z407	3707 aa		0.59	□□□□□ -2.31
CCNH-208	ENST00000510921	PDZD2	O15018	2839 aa		0.59	□□□□□ -2.31
CCNH-208	ENST00000510921	NCOR2	Q9Y618	2525 aa		0.59	□□□□□ -2.31
CCNH-208	ENST00000510921	DNAH2	Q9P225	4427 aa		0.59	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms