RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 K7EQZ3 153 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 DSPP15924 2871 aaKnown RBP0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 LAMA1P25391 3075 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 ASPMQ8IZT6 3477 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 ZFYVE26Q68DK2 2539 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 ITPR1Q14643 2758 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 TEX15Q9BXT5 2789 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 BOD1L1Q8NFC6 3051 aa0.83□□□□□ -2.28
AP001960.1-201ENST00000506494 CRYBG3Q68DQ2 2970 aa0.82□□□□□ -2.28
AP001960.1-201ENST00000506494 UTP20O75691 2785 aaKnown RBP0.82□□□□□ -2.28
AP001960.1-201ENST00000506494 MGAQ8IWI9 3026 aa0.82□□□□□ -2.28
AP001960.1-201ENST00000506494 FLNAP21333 2647 aaKnown RBP0.82□□□□□ -2.28
AP001960.1-201ENST00000506494 IGIPA6NJ69 53 aa0.82□□□□□ -2.28
AP001960.1-201ENST00000506494 COX6B1P14854 86 aa0.82□□□□□ -2.28
AP001960.1-201ENST00000506494 FREM2Q5SZK8 3169 aa0.82□□□□□ -2.28
AP001960.1-201ENST00000506494 CREBBPQ92793 2442 aa0.81□□□□□ -2.28
AP001960.1-201ENST00000506494 USF3Q68DE3 2245 aa0.81□□□□□ -2.28
AP001960.1-201ENST00000506494 ZANQ9Y493 2812 aa0.81□□□□□ -2.28
AP001960.1-201ENST00000506494 WDFY3Q8IZQ1 3526 aa0.81□□□□□ -2.28
AP001960.1-201ENST00000506494 DEFB123Q8N688 67 aa0.81□□□□□ -2.28
AP001960.1-201ENST00000506494 MRPL34Q9BQ48 92 aaKnown RBP0.81□□□□□ -2.28
AP001960.1-201ENST00000506494 PIEZO2Q9H5I5 2752 aa0.81□□□□□ -2.28
AP001960.1-201ENST00000506494 HERC2O95714 4834 aa0.81□□□□□ -2.28
AP001960.1-201ENST00000506494 LRBAP50851 2863 aa0.8□□□□□ -2.28
AP001960.1-201ENST00000506494 CELSR2Q9HCU4 2923 aa0.8□□□□□ -2.28
AP001960.1-201ENST00000506494 CELSR1Q9NYQ6 3014 aa0.8□□□□□ -2.28
AP001960.1-201ENST00000506494 LYNX1G3V0Z9 82 aa0.8□□□□□ -2.28
AP001960.1-201ENST00000506494 SNRPGP62308 76 aaKnown RBP0.8□□□□□ -2.28
AP001960.1-201ENST00000506494 PTPRZ1P23471 2315 aaPredicted RBP0.8□□□□□ -2.28
AP001960.1-201ENST00000506494 SPG11Q96JI7 2443 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 DMXL2Q8TDJ6 3036 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 MYO15AQ9UKN7 3530 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 CENPEQ02224 2701 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 UBR5O95071 2799 aaPredicted RBP0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 SMIM2Q9BVW6 85 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 PRO3102Q9H379 93 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 CDKN2A-AS1Q9UH64 79 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 TIMM8BQ9Y5J9 83 aaPredicted RBP0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 U3KQA8 63 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 CHD9Q3L8U1 2897 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 DNAH14Q0VDD8 3507 aa0.79□□□□□ -2.28
AP001960.1-201ENST00000506494 KMT2DO14686 5537 aa0.78□□□□□ -2.28
AP001960.1-201ENST00000506494 NF1P21359 2839 aa0.78□□□□□ -2.28
AP001960.1-201ENST00000506494 MINOS1Q5TGZ0 78 aa0.78□□□□□ -2.28
AP001960.1-201ENST00000506494 Q5VSD8 79 aa0.78□□□□□ -2.28
AP001960.1-201ENST00000506494 ATMQ13315 3056 aa0.78□□□□□ -2.28
AP001960.1-201ENST00000506494 SPTBN1Q01082 2364 aaKnown RBP0.78□□□□□ -2.28
AP001960.1-201ENST00000506494 MAP1BP46821 2468 aaKnown RBP0.78□□□□□ -2.28
AP001960.1-201ENST00000506494 USP9YO00507 2555 aaPredicted RBP0.78□□□□□ -2.28
AP001960.1-201ENST00000506494 DMDP11532 3685 aa0.78□□□□□ -2.29
AP001960.1-201ENST00000506494 NBEAL1Q6ZS30 2694 aa0.78□□□□□ -2.29
AP001960.1-201ENST00000506494 TENM2Q9NT68 2774 aa0.78□□□□□ -2.29
AP001960.1-201ENST00000506494 PKD1L1Q8TDX9 2849 aa0.78□□□□□ -2.29
AP001960.1-201ENST00000506494 CEP250Q9BV73 2442 aa0.77□□□□□ -2.29
AP001960.1-201ENST00000506494 AKAP13Q12802 2813 aa0.77□□□□□ -2.29
AP001960.1-201ENST00000506494 PRRC2CQ9Y520 2896 aaKnown RBP0.77□□□□□ -2.29
AP001960.1-201ENST00000506494 SPINK4O60575 86 aa0.77□□□□□ -2.29
AP001960.1-201ENST00000506494 NDUFA3O95167 84 aa0.77□□□□□ -2.29
AP001960.1-201ENST00000506494 LINC00158P58513 81 aa0.77□□□□□ -2.29
AP001960.1-201ENST00000506494 C6orf48Q9UBA6 75 aa0.77□□□□□ -2.29
AP001960.1-201ENST00000506494 NIPBLQ6KC79 2804 aaeCLIP0.77□□□□□ -2.29
AP001960.1-201ENST00000506494 SMG1Q96Q15 3661 aaKnown RBP0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 FLNCQ14315 2725 aa0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 CEP295Q9C0D2 2601 aa0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 RNF213Q63HN8 5207 aa0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 DEFB109BQ30KR1 87 aa0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 LINC00308Q8TCZ7 52 aa0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 DSTQ03001 7570 aaKnown RBP0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 MAP1AP78559 2803 aaPredicted RBP0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 NSD1Q96L73 2696 aaPredicted RBP0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 GVINP1Q7Z2Y8 2422 aa0.76□□□□□ -2.29
AP001960.1-201ENST00000506494 TACC2O95359 2948 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 TGP01266 2768 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 TLN1Q9Y490 2541 aaKnown RBP0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 ACACBO00763 2458 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 H3BUA1 57 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 HMCN2Q8NDA2 5059 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 ITPR2Q14571 2701 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 MDN1Q9NU22 5596 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 IGF2RP11717 2491 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 PTPRQQ9UMZ3 2332 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 DCHS2Q6V1P9 2916 aa0.75□□□□□ -2.29
AP001960.1-201ENST00000506494 ATRQ13535 2644 aa0.74□□□□□ -2.29
AP001960.1-201ENST00000506494 HIVEP3Q5T1R4 2406 aa0.74□□□□□ -2.29
AP001960.1-201ENST00000506494 NDUFA1O15239 70 aa0.74□□□□□ -2.29
AP001960.1-201ENST00000506494 DEFB105AQ8NG35 78 aa0.74□□□□□ -2.29
AP001960.1-201ENST00000506494 LAMA5O15230 3695 aa0.74□□□□□ -2.29
AP001960.1-201ENST00000506494 SONP18583 2426 aaKnown RBP0.73□□□□□ -2.29
AP001960.1-201ENST00000506494 IAPPP10997 89 aa0.73□□□□□ -2.29
AP001960.1-201ENST00000506494 ADGRG4Q8IZF6 3080 aa0.73□□□□□ -2.29
AP001960.1-201ENST00000506494 SPTAN1Q13813 2472 aaKnown RBP0.73□□□□□ -2.29
AP001960.1-201ENST00000506494 AKAP6Q13023 2319 aa0.72□□□□□ -2.29
AP001960.1-201ENST00000506494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.72□□□□□ -2.29
AP001960.1-201ENST00000506494 SPRR1AP35321 89 aa0.72□□□□□ -2.29
AP001960.1-201ENST00000506494 CRIP1P50238 77 aa0.72□□□□□ -2.29
AP001960.1-201ENST00000506494 DEFB131AP59861 70 aa0.72□□□□□ -2.29
AP001960.1-201ENST00000506494 RIF1Q5UIP0 2472 aaKnown RBP0.72□□□□□ -2.29
AP001960.1-201ENST00000506494 OTOGQ6ZRI0 2925 aa0.71□□□□□ -2.3
AP001960.1-201ENST00000506494 NBPF19A0A087WUL8 3843 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms