RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TRBV10-3A0A0K0K1G6 114 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 H3BNG1 76 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 H7BZZ5 65 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 IGKV2D-40P01614 121 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 NDUFA12Q9UI09 145 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 FAT3Q8TDW7 4589 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 PKHD1L1Q86WI1 4243 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 FXYD6-FXYD2A0A087WZ82 144 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 M0R3E3 92 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 COX6CP09669 75 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 CNBPP62633 177 aaKnown RBP1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 C9orf116Q5BN46 136 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 C10orf113Q5VZT2 155 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 C2orf82Q6UX34 121 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 Q8N814 137 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 MANBALQ9NQG1 85 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 PRO1854Q9UHT4 67 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRGV1A0A0A0MS02 117 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 SPINK4O60575 86 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 C3orf79P0CE67 100 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 UBE2D3P61077 147 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 UBE2D2P62837 147 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 ATP5EP2Q5VTU8 51 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 LYPD5Q6UWN5 251 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 CASC2Q6XLA1 102 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 IFI27L1Q96BM0 104 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 LIMD2Q9BT23 127 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 CDC42SE1Q9NRR8 79 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 TMEM14CQ9P0S9 112 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRBV25-1A0A075B6N4 114 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 ZNF56Q15929 161 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 BAGE3Q86Y29 109 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 BAGE2Q86Y30 109 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 WFDC10BQ8IUB3 73 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q8TAT8 98 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 PRO0255Q9UI72 69 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRAV23DV6A0A075B6W5 121 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 A0A087WTM6 91 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 LOC107984156A0A0G2JMH3 177 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 HCG22E2RYF7 251 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 SMR3BP02814 79 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 GCHFRP30047 84 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q5VSD8 79 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 ARL17AQ8IVW1 177 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 FAM19A2Q8N3H0 131 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 LINC00474Q9P2X8 69 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 C22orf24Q9Y442 160 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 LOC110117498A0A087WWA1 95 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 MYMXA0A1B0GTQ4 84 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 HAMPP81172 84 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 S100A7L2Q5SY68 101 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q6JHZ5 121 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 NMES1Q9C002 83 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 LENEPQ9Y5L5 61 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 IFI27P40305 119 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P3-201ENST00000502802 LINC01556Q5JQF7 62 aa1.87□□□□□ -2.11
HMGB1P3-201ENST00000502802 PPP1R1CQ8WVI7 109 aa1.87□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRAV22A0A0B4J277 110 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRAV21A0A0B4J279 112 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 LOC101927531A0A1B0GV80 90 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 IGHV3-30P01768 117 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 IGHV3-33P01772 117 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 ARL14EPLP0DKL9 152 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 IGHV3-30-5P0DP03 117 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 LELP1Q5T871 98 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q6ZSA8 131 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 ARL2-SNX15V9GYD0 113 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 UBR4Q5T4S7 5183 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 ZNF815PA8K554 130 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 INE1O15225 51 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 ELOF1P60002 83 aaKnown RBP1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 KRTAP10-4P60372 401 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 ATXN8Q156A1 80 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 KRTAP26-1Q6PEX3 210 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q86TA4 180 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 SPTSSBQ8NFR3 76 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 AMELXQ99217 191 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 ORMDL1Q9P0S3 153 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 TNXBP22105 4242 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 LRP2P98164 4655 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 HIGD1CA8MV81 97 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 CRIP1P50238 77 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 C20orf197Q8N268 126 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 CDC42SE2Q9NRR3 84 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 GNG13Q9P2W3 67 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRBV10-1A0A0K0K1A3 114 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 H3BVH4 76 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 ARMS2P0C7Q2 107 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 SERF2P84101 59 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 MIR22HGQ0VDD5 57 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 Q5VV11 94 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 DEFB104AQ8WTQ1 72 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 TMEM167BQ9NRX6 74 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms