RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
PTPN20-212ENST00000502254 OCR1Q9BZK8 76 aa3.23□□□□□ -1.89
PTPN20-212ENST00000502254 SRRM2Q9UQ35 2752 aaKnown RBP3.22□□□□□ -1.89
PTPN20-212ENST00000502254 A0A087WSZ3 146 aa3.22□□□□□ -1.89
PTPN20-212ENST00000502254 TRBV7-7A0A0K0K1E9 115 aa3.22□□□□□ -1.89
PTPN20-212ENST00000502254 PKHD1L1Q86WI1 4243 aa3.22□□□□□ -1.89
PTPN20-212ENST00000502254 K7ERU9 68 aa3.21□□□□□ -1.9
PTPN20-212ENST00000502254 OXTP01178 125 aa3.21□□□□□ -1.9
PTPN20-212ENST00000502254 KRTAP10-8P60410 259 aa3.21□□□□□ -1.9
PTPN20-212ENST00000502254 CD164Q04900 197 aa3.21□□□□□ -1.9
PTPN20-212ENST00000502254 Q6Q795 121 aa3.21□□□□□ -1.9
PTPN20-212ENST00000502254 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
PTPN20-212ENST00000502254 SPINK1P00995 79 aa3.2□□□□□ -1.9
PTPN20-212ENST00000502254 ACYP1P07311 99 aa3.2□□□□□ -1.9
PTPN20-212ENST00000502254 NREPQ16612 68 aa3.2□□□□□ -1.9
PTPN20-212ENST00000502254 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
PTPN20-212ENST00000502254 LINC00846Q9NV44 126 aa3.2□□□□□ -1.9
PTPN20-212ENST00000502254 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 FAM240AA0A1B0GVK7 77 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 A0A1B0GW54 56 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 MT1HL1P0DM35 61 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 LIMD2Q9BT23 127 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 UBL5Q9BZL1 73 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 SS18L2Q9UHA2 77 aa3.19□□□□□ -1.9
PTPN20-212ENST00000502254 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
PTPN20-212ENST00000502254 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
PTPN20-212ENST00000502254 IGKV3D-7A0A0C4DH55 119 aa3.16□□□□□ -1.9
PTPN20-212ENST00000502254 BPY2O14599 106 aa3.16□□□□□ -1.9
PTPN20-212ENST00000502254 IGKV4-1P06312 121 aa3.16□□□□□ -1.9
PTPN20-212ENST00000502254 C1orf195Q5TG92 126 aa3.16□□□□□ -1.9
PTPN20-212ENST00000502254 RETNLBQ9BQ08 111 aa3.16□□□□□ -1.9
PTPN20-212ENST00000502254 RPS29P62273 56 aaKnown RBP3.15□□□□□ -1.91
PTPN20-212ENST00000502254 Q5XG85 94 aa3.15□□□□□ -1.91
PTPN20-212ENST00000502254 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
PTPN20-212ENST00000502254 Q96NJ1 140 aa3.15□□□□□ -1.91
PTPN20-212ENST00000502254 SIGMAR1Q99720 223 aa3.15□□□□□ -1.91
PTPN20-212ENST00000502254 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
PTPN20-212ENST00000502254 LINC00472Q9H8W2 130 aa3.15□□□□□ -1.91
PTPN20-212ENST00000502254 MYCBP2O75592 4640 aa3.15□□□□□ -1.91
PTPN20-212ENST00000502254 FLG2Q5D862 2391 aaPredicted RBP3.14□□□□□ -1.91
PTPN20-212ENST00000502254 ASB16-AS1Q495Z4 193 aa3.14□□□□□ -1.91
PTPN20-212ENST00000502254 J3KT08 172 aa3.13□□□□□ -1.91
PTPN20-212ENST00000502254 MT-ATP8P03928 68 aa3.13□□□□□ -1.91
PTPN20-212ENST00000502254 Q8N9L7 120 aa3.13□□□□□ -1.91
PTPN20-212ENST00000502254 IGHV6-1A0A0B4J1U7 121 aa3.12□□□□□ -1.91
PTPN20-212ENST00000502254 NDUFB1O75438 58 aa3.12□□□□□ -1.91
PTPN20-212ENST00000502254 DSCR10P59022 87 aa3.12□□□□□ -1.91
PTPN20-212ENST00000502254 HIST1H4AP62805 103 aaKnown RBP3.12□□□□□ -1.91
PTPN20-212ENST00000502254 CXCL6P80162 114 aa3.12□□□□□ -1.91
PTPN20-212ENST00000502254 PRR4Q16378 134 aa3.12□□□□□ -1.91
PTPN20-212ENST00000502254 TNXBP22105 4242 aa3.11□□□□□ -1.91
PTPN20-212ENST00000502254 A8MWP4 228 aa3.11□□□□□ -1.91
PTPN20-212ENST00000502254 K7EQZ3 153 aa3.11□□□□□ -1.91
PTPN20-212ENST00000502254 ATP5EP2Q5VTU8 51 aa3.11□□□□□ -1.91
PTPN20-212ENST00000502254 HERC1Q15751 4861 aa3.11□□□□□ -1.91
PTPN20-212ENST00000502254 A0A1B0GVX0 72 aa3.1□□□□□ -1.91
PTPN20-212ENST00000502254 A0A087WVE0 104 aa3.09□□□□□ -1.91
PTPN20-212ENST00000502254 C9orf92A6NGG3 77 aa3.09□□□□□ -1.91
PTPN20-212ENST00000502254 FP248Q71RG6 208 aaPredicted RBP3.09□□□□□ -1.91
PTPN20-212ENST00000502254 PRR15Q8IV56 129 aa3.09□□□□□ -1.91
PTPN20-212ENST00000502254 LINC00313P59037 77 aa3.08□□□□□ -1.92
PTPN20-212ENST00000502254 WFDC13Q8IUB5 93 aa3.08□□□□□ -1.92
PTPN20-212ENST00000502254 C8orf17Q9NRJ1 99 aa3.08□□□□□ -1.92
PTPN20-212ENST00000502254 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
PTPN20-212ENST00000502254 MMP24-AS1A0A0U1RRL7 71 aa3.06□□□□□ -1.92
PTPN20-212ENST00000502254 hDV103S1A0JD37 113 aa3.06□□□□□ -1.92
PTPN20-212ENST00000502254 HCG22E2RYF7 251 aa3.06□□□□□ -1.92
PTPN20-212ENST00000502254 CASC2Q6XLA1 102 aa3.06□□□□□ -1.92
PTPN20-212ENST00000502254 IMUPQ9GZP8 106 aa3.06□□□□□ -1.92
PTPN20-212ENST00000502254 MUC2Q02817 5179 aa3.06□□□□□ -1.92
PTPN20-212ENST00000502254 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
PTPN20-212ENST00000502254 DMBT1Q9UGM3 2413 aaPredicted RBP3.04□□□□□ -1.92
PTPN20-212ENST00000502254 FAM236AA0A1B0GUQ0 79 aa3.04□□□□□ -1.92
PTPN20-212ENST00000502254 FAM236BA0A1B0GV22 79 aa3.04□□□□□ -1.92
PTPN20-212ENST00000502254 NDUFS5O43920 106 aa3.04□□□□□ -1.92
PTPN20-212ENST00000502254 SCGB1A1P11684 91 aa3.04□□□□□ -1.92
PTPN20-212ENST00000502254 KRTAP13-3Q3SY46 172 aa3.04□□□□□ -1.92
PTPN20-212ENST00000502254 TMEM254Q8TBM7 123 aa3.04□□□□□ -1.92
PTPN20-212ENST00000502254 MRPL34Q9BQ48 92 aaKnown RBP3.04□□□□□ -1.92
PTPN20-212ENST00000502254 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
PTPN20-212ENST00000502254 A8MUU9 505 aa2.99□□□□□ -1.93
PTPN20-212ENST00000502254 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
PTPN20-212ENST00000502254 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
PTPN20-212ENST00000502254 ATOX1O00244 68 aa2.98□□□□□ -1.93
PTPN20-212ENST00000502254 RPL37P61927 97 aaKnown RBP2.98□□□□□ -1.93
PTPN20-212ENST00000502254 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
PTPN20-212ENST00000502254 UQCRQO14949 82 aa2.97□□□□□ -1.93
PTPN20-212ENST00000502254 Q5W150 140 aa2.97□□□□□ -1.93
PTPN20-212ENST00000502254 ATP11AUNQ6ZP68 121 aa2.97□□□□□ -1.93
PTPN20-212ENST00000502254 SMIM20Q8N5G0 67 aa2.97□□□□□ -1.93
PTPN20-212ENST00000502254 TP53AIP1Q9HCN2 124 aa2.97□□□□□ -1.93
PTPN20-212ENST00000502254 TRAV7A0A075B6U4 112 aa2.96□□□□□ -1.94
PTPN20-212ENST00000502254 PCOTHQ58A44 107 aa2.96□□□□□ -1.94
PTPN20-212ENST00000502254 ZCCHC13Q8WW36 166 aaKnown RBP2.96□□□□□ -1.94
PTPN20-212ENST00000502254 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
PTPN20-212ENST00000502254 LPAP08519 4548 aa2.96□□□□□ -1.94
PTPN20-212ENST00000502254 H0Y9P7 68 aa2.95□□□□□ -1.94
PTPN20-212ENST00000502254 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms