RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 A0A0G2JQZ4 141 aa4.51□□□□□ -1.69
CDC42-205ENST00000498236 CD164Q04900 197 aa4.51□□□□□ -1.69
CDC42-205ENST00000498236 A0A087WSZ3 146 aa4.5□□□□□ -1.69
CDC42-205ENST00000498236 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
CDC42-205ENST00000498236 HSPG2P98160 4391 aa4.49□□□□□ -1.69
CDC42-205ENST00000498236 A0A087X002 238 aa4.49□□□□□ -1.69
CDC42-205ENST00000498236 KRTAP13-2Q52LG2 175 aa4.49□□□□□ -1.69
CDC42-205ENST00000498236 RYR1P21817 5038 aa4.49□□□□□ -1.69
CDC42-205ENST00000498236 FAT1Q14517 4588 aa4.48□□□□□ -1.69
CDC42-205ENST00000498236 IGKV3D-7A0A0C4DH55 119 aa4.48□□□□□ -1.69
CDC42-205ENST00000498236 C5orf47Q569G3 176 aa4.48□□□□□ -1.69
CDC42-205ENST00000498236 SS18L2Q9UHA2 77 aa4.48□□□□□ -1.69
CDC42-205ENST00000498236 BPY2O14599 106 aa4.47□□□□□ -1.69
CDC42-205ENST00000498236 Q5XG85 94 aa4.46□□□□□ -1.7
CDC42-205ENST00000498236 LINC00472Q9H8W2 130 aa4.46□□□□□ -1.7
CDC42-205ENST00000498236 J3KT08 172 aa4.45□□□□□ -1.7
CDC42-205ENST00000498236 HIST1H4AP62805 103 aaKnown RBP4.45□□□□□ -1.7
CDC42-205ENST00000498236 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
CDC42-205ENST00000498236 EPPK1P58107 5090 aaKnown RBP4.45□□□□□ -1.7
CDC42-205ENST00000498236 DSCR10P59022 87 aa4.44□□□□□ -1.7
CDC42-205ENST00000498236 Q5VSD8 79 aa4.44□□□□□ -1.7
CDC42-205ENST00000498236 IGKV4-1P06312 121 aa4.43□□□□□ -1.7
CDC42-205ENST00000498236 HRCT1Q6UXD1 115 aa4.43□□□□□ -1.7
CDC42-205ENST00000498236 TYMSOSQ8TAI1 123 aa4.43□□□□□ -1.7
CDC42-205ENST00000498236 Q96NJ1 140 aa4.43□□□□□ -1.7
CDC42-205ENST00000498236 A0A087WVE0 104 aa4.42□□□□□ -1.7
CDC42-205ENST00000498236 FAM236AA0A1B0GUQ0 79 aa4.42□□□□□ -1.7
CDC42-205ENST00000498236 FAM236BA0A1B0GV22 79 aa4.42□□□□□ -1.7
CDC42-205ENST00000498236 SPINK1P00995 79 aa4.42□□□□□ -1.7
CDC42-205ENST00000498236 RPS29P62273 56 aaKnown RBP4.42□□□□□ -1.7
CDC42-205ENST00000498236 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
CDC42-205ENST00000498236 A8MWP4 228 aa4.41□□□□□ -1.7
CDC42-205ENST00000498236 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
CDC42-205ENST00000498236 K7EQZ3 153 aa4.4□□□□□ -1.71
CDC42-205ENST00000498236 Q8N9L7 120 aa4.4□□□□□ -1.71
CDC42-205ENST00000498236 LIMD2Q9BT23 127 aa4.4□□□□□ -1.71
CDC42-205ENST00000498236 ATOX1O00244 68 aa4.39□□□□□ -1.71
CDC42-205ENST00000498236 DEFB116Q30KQ4 102 aa4.39□□□□□ -1.71
CDC42-205ENST00000498236 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
CDC42-205ENST00000498236 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
CDC42-205ENST00000498236 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
CDC42-205ENST00000498236 NDUFB1O75438 58 aa4.38□□□□□ -1.71
CDC42-205ENST00000498236 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
CDC42-205ENST00000498236 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
CDC42-205ENST00000498236 TNXBP22105 4242 aa4.36□□□□□ -1.71
CDC42-205ENST00000498236 HCG22E2RYF7 251 aa4.36□□□□□ -1.71
CDC42-205ENST00000498236 C1orf195Q5TG92 126 aa4.36□□□□□ -1.71
CDC42-205ENST00000498236 SMIM20Q8N5G0 67 aa4.36□□□□□ -1.71
CDC42-205ENST00000498236 ANAPC13Q9BS18 74 aa4.36□□□□□ -1.71
CDC42-205ENST00000498236 A0A1B0GVX0 72 aa4.35□□□□□ -1.71
CDC42-205ENST00000498236 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
CDC42-205ENST00000498236 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
CDC42-205ENST00000498236 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.72
CDC42-205ENST00000498236 MMP24-AS1A0A0U1RRL7 71 aa4.33□□□□□ -1.72
CDC42-205ENST00000498236 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
CDC42-205ENST00000498236 V9GYY9 64 aa4.33□□□□□ -1.72
CDC42-205ENST00000498236 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
CDC42-205ENST00000498236 TRAV7A0A075B6U4 112 aa4.32□□□□□ -1.72
CDC42-205ENST00000498236 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
CDC42-205ENST00000498236 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
CDC42-205ENST00000498236 OCR1Q9BZK8 76 aa4.32□□□□□ -1.72
CDC42-205ENST00000498236 C8orf17Q9NRJ1 99 aa4.32□□□□□ -1.72
CDC42-205ENST00000498236 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
CDC42-205ENST00000498236 OXTP01178 125 aa4.31□□□□□ -1.72
CDC42-205ENST00000498236 COX7CP15954 63 aa4.31□□□□□ -1.72
CDC42-205ENST00000498236 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
CDC42-205ENST00000498236 hDV103S1A0JD37 113 aa4.3□□□□□ -1.72
CDC42-205ENST00000498236 UQCRQO14949 82 aa4.3□□□□□ -1.72
CDC42-205ENST00000498236 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
CDC42-205ENST00000498236 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
CDC42-205ENST00000498236 TMEM254Q8TBM7 123 aa4.29□□□□□ -1.72
CDC42-205ENST00000498236 PCLOQ9Y6V0 5065 aa4.28□□□□□ -1.72
CDC42-205ENST00000498236 LINC00313P59037 77 aa4.28□□□□□ -1.72
CDC42-205ENST00000498236 FLG2Q5D862 2391 aaPredicted RBP4.27□□□□□ -1.73
CDC42-205ENST00000498236 NOTCH2NLQ7Z3S9 236 aa4.27□□□□□ -1.73
CDC42-205ENST00000498236 MRPL34Q9BQ48 92 aaKnown RBP4.27□□□□□ -1.73
CDC42-205ENST00000498236 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
CDC42-205ENST00000498236 HERC2O95714 4834 aa4.27□□□□□ -1.73
CDC42-205ENST00000498236 MYCBP2O75592 4640 aa4.26□□□□□ -1.73
CDC42-205ENST00000498236 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
CDC42-205ENST00000498236 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
CDC42-205ENST00000498236 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
CDC42-205ENST00000498236 FP248Q71RG6 208 aaPredicted RBP4.25□□□□□ -1.73
CDC42-205ENST00000498236 KLKP1Q107X0 134 aa4.23□□□□□ -1.73
CDC42-205ENST00000498236 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
CDC42-205ENST00000498236 H3BPC8 53 aa4.22□□□□□ -1.73
CDC42-205ENST00000498236 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
CDC42-205ENST00000498236 A0A0U1RQV1 116 aa4.21□□□□□ -1.74
CDC42-205ENST00000498236 C20orf197Q8N268 126 aa4.21□□□□□ -1.74
CDC42-205ENST00000498236 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.74
CDC42-205ENST00000498236 DMBT1Q9UGM3 2413 aaPredicted RBP4.2□□□□□ -1.74
CDC42-205ENST00000498236 TRAV22A0A0B4J277 110 aa4.2□□□□□ -1.74
CDC42-205ENST00000498236 NDUFS5O43920 106 aa4.2□□□□□ -1.74
CDC42-205ENST00000498236 MP68P56378 58 aa4.2□□□□□ -1.74
CDC42-205ENST00000498236 ZCCHC13Q8WW36 166 aaKnown RBP4.2□□□□□ -1.74
CDC42-205ENST00000498236 NDUFC1O43677 76 aa4.19□□□□□ -1.74
CDC42-205ENST00000498236 KRTAP13-3Q3SY46 172 aa4.19□□□□□ -1.74
CDC42-205ENST00000498236 IGLV7-46A0A075B6I9 117 aa4.18□□□□□ -1.74
CDC42-205ENST00000498236 H0Y9P7 68 aa4.18□□□□□ -1.74
CDC42-205ENST00000498236 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms