RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
PKP4-215ENST00000494945 A0A1B0GVX0 72 aa6.23□□□□□ -1.41
PKP4-215ENST00000494945 A0A087WVE0 104 aa6.22□□□□□ -1.41
PKP4-215ENST00000494945 IGHV6-1A0A0B4J1U7 121 aa6.19□□□□□ -1.42
PKP4-215ENST00000494945 C8orf87E5RJ46 101 aa6.19□□□□□ -1.42
PKP4-215ENST00000494945 J3QL48 77 aa6.19□□□□□ -1.42
PKP4-215ENST00000494945 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
PKP4-215ENST00000494945 MMP24-AS1A0A0U1RRL7 71 aa6.18□□□□□ -1.42
PKP4-215ENST00000494945 HCG22E2RYF7 251 aa6.18□□□□□ -1.42
PKP4-215ENST00000494945 FP248Q71RG6 208 aaPredicted RBP6.18□□□□□ -1.42
PKP4-215ENST00000494945 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
PKP4-215ENST00000494945 C8orf17Q9NRJ1 99 aa6.18□□□□□ -1.42
PKP4-215ENST00000494945 ABCA13Q86UQ4 5058 aa6.18□□□□□ -1.42
PKP4-215ENST00000494945 FAM236AA0A1B0GUQ0 79 aa6.17□□□□□ -1.42
PKP4-215ENST00000494945 FAM236BA0A1B0GV22 79 aa6.17□□□□□ -1.42
PKP4-215ENST00000494945 LINC00313P59037 77 aa6.15□□□□□ -1.42
PKP4-215ENST00000494945 CASC2Q6XLA1 102 aa6.15□□□□□ -1.42
PKP4-215ENST00000494945 hDV103S1A0JD37 113 aa6.14□□□□□ -1.43
PKP4-215ENST00000494945 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
PKP4-215ENST00000494945 ATOX1O00244 68 aa6.13□□□□□ -1.43
PKP4-215ENST00000494945 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
PKP4-215ENST00000494945 TMEM254Q8TBM7 123 aa6.13□□□□□ -1.43
PKP4-215ENST00000494945 IGLV7-46A0A075B6I9 117 aa6.1□□□□□ -1.43
PKP4-215ENST00000494945 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
PKP4-215ENST00000494945 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.43
PKP4-215ENST00000494945 SMIM20Q8N5G0 67 aa6.09□□□□□ -1.43
PKP4-215ENST00000494945 PRR4Q16378 134 aa6.07□□□□□ -1.44
PKP4-215ENST00000494945 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
PKP4-215ENST00000494945 OCR1Q9BZK8 76 aa6.06□□□□□ -1.44
PKP4-215ENST00000494945 TRAV7A0A075B6U4 112 aa6.05□□□□□ -1.44
PKP4-215ENST00000494945 KRTAP13-3Q3SY46 172 aa6.05□□□□□ -1.44
PKP4-215ENST00000494945 Q8N9P0 234 aaPredicted RBP6.05□□□□□ -1.44
PKP4-215ENST00000494945 TP53AIP1Q9HCN2 124 aa6.05□□□□□ -1.44
PKP4-215ENST00000494945 NDUFS5O43920 106 aa6.04□□□□□ -1.44
PKP4-215ENST00000494945 ANAPC13Q9BS18 74 aa6.04□□□□□ -1.44
PKP4-215ENST00000494945 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
PKP4-215ENST00000494945 SERP2Q8N6R1 65 aa6.03□□□□□ -1.44
PKP4-215ENST00000494945 UQCRQO14949 82 aa6.02□□□□□ -1.45
PKP4-215ENST00000494945 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
PKP4-215ENST00000494945 A8MUU9 505 aa6.01□□□□□ -1.45
PKP4-215ENST00000494945 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
PKP4-215ENST00000494945 COX7CP15954 63 aa5.99□□□□□ -1.45
PKP4-215ENST00000494945 Q75L30 129 aa5.99□□□□□ -1.45
PKP4-215ENST00000494945 C5orf47Q569G3 176 aa5.98□□□□□ -1.45
PKP4-215ENST00000494945 XP32Q5T750 250 aa5.97□□□□□ -1.45
PKP4-215ENST00000494945 TRAV22A0A0B4J277 110 aa5.96□□□□□ -1.46
PKP4-215ENST00000494945 H0Y9P7 68 aa5.95□□□□□ -1.46
PKP4-215ENST00000494945 MP68P56378 58 aa5.95□□□□□ -1.46
PKP4-215ENST00000494945 PCP4P48539 62 aa5.94□□□□□ -1.46
PKP4-215ENST00000494945 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
PKP4-215ENST00000494945 ZCCHC13Q8WW36 166 aaKnown RBP5.94□□□□□ -1.46
PKP4-215ENST00000494945 H3BPC8 53 aa5.93□□□□□ -1.46
PKP4-215ENST00000494945 Q5W150 140 aa5.93□□□□□ -1.46
PKP4-215ENST00000494945 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.46
PKP4-215ENST00000494945 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
PKP4-215ENST00000494945 A0A0U1RQV1 116 aa5.89□□□□□ -1.47
PKP4-215ENST00000494945 CCDC179H3BU77 68 aa5.89□□□□□ -1.47
PKP4-215ENST00000494945 KLKP1Q107X0 134 aa5.89□□□□□ -1.47
PKP4-215ENST00000494945 LINC00208Q96KT6 92 aa5.89□□□□□ -1.47
PKP4-215ENST00000494945 LOC101927531A0A1B0GV80 90 aa5.88□□□□□ -1.47
PKP4-215ENST00000494945 C1orf64Q8NEQ6 169 aa5.88□□□□□ -1.47
PKP4-215ENST00000494945 LPAP08519 4548 aa5.87□□□□□ -1.47
PKP4-215ENST00000494945 SNURFQ9Y675 71 aa5.86□□□□□ -1.47
PKP4-215ENST00000494945 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
PKP4-215ENST00000494945 NDUFC1O43677 76 aa5.83□□□□□ -1.48
PKP4-215ENST00000494945 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
PKP4-215ENST00000494945 LRP2P98164 4655 aa5.82□□□□□ -1.48
PKP4-215ENST00000494945 PCOTHQ58A44 107 aa5.82□□□□□ -1.48
PKP4-215ENST00000494945 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
PKP4-215ENST00000494945 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
PKP4-215ENST00000494945 HERC1Q15751 4861 aa5.82□□□□□ -1.48
PKP4-215ENST00000494945 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
PKP4-215ENST00000494945 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
PKP4-215ENST00000494945 SPINK7P58062 85 aa5.78□□□□□ -1.48
PKP4-215ENST00000494945 H7BZZ5 65 aa5.77□□□□□ -1.49
PKP4-215ENST00000494945 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
PKP4-215ENST00000494945 MUC17Q685J3 4493 aa5.76□□□□□ -1.49
PKP4-215ENST00000494945 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
PKP4-215ENST00000494945 HRES1P13985 223 aa5.72□□□□□ -1.49
PKP4-215ENST00000494945 TMEM258P61165 79 aa5.72□□□□□ -1.49
PKP4-215ENST00000494945 ATP5EP56381 51 aaPredicted RBP5.69□□□□□ -1.5
PKP4-215ENST00000494945 FAM236DA0A1B0GTK5 79 aa5.67□□□□□ -1.5
PKP4-215ENST00000494945 FAM236CP0DP71 79 aa5.67□□□□□ -1.5
PKP4-215ENST00000494945 C4orf26Q17RF5 130 aa5.66□□□□□ -1.5
PKP4-215ENST00000494945 KRTAP4-1Q9BYQ7 146 aa5.65□□□□□ -1.5
PKP4-215ENST00000494945 COX6B2Q6YFQ2 88 aa5.64□□□□□ -1.51
PKP4-215ENST00000494945 A8MUN3 132 aa5.63□□□□□ -1.51
PKP4-215ENST00000494945 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
PKP4-215ENST00000494945 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
PKP4-215ENST00000494945 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
PKP4-215ENST00000494945 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
PKP4-215ENST00000494945 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
PKP4-215ENST00000494945 ACYP2P14621 99 aa5.59□□□□□ -1.51
PKP4-215ENST00000494945 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
PKP4-215ENST00000494945 SERP1Q9Y6X1 66 aa5.54□□□□□ -1.52
PKP4-215ENST00000494945 H1FX-AS1Q4G0G2 97 aa5.53□□□□□ -1.52
PKP4-215ENST00000494945 COA5Q86WW8 74 aa5.53□□□□□ -1.52
PKP4-215ENST00000494945 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
PKP4-215ENST00000494945 CHKB-CPT1BH3BT56 60 aa5.49□□□□□ -1.53
PKP4-215ENST00000494945 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms