RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 IGLV9-49A0A0B4J1Y8 123 aa6.95□□□□□ -1.3
RFC4-214ENST00000494047 A0A0G2JQZ4 141 aa6.95□□□□□ -1.3
RFC4-214ENST00000494047 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
RFC4-214ENST00000494047 MRPL34Q9BQ48 92 aaKnown RBP6.95□□□□□ -1.3
RFC4-214ENST00000494047 LOC101927531A0A1B0GV80 90 aa6.94□□□□□ -1.3
RFC4-214ENST00000494047 DNAH2Q9P225 4427 aa6.94□□□□□ -1.3
RFC4-214ENST00000494047 DNAH17Q9UFH2 4485 aa6.94□□□□□ -1.3
RFC4-214ENST00000494047 SSBP3-AS1Q7Z2R9 100 aa6.93□□□□□ -1.3
RFC4-214ENST00000494047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
RFC4-214ENST00000494047 HECTD4Q9Y4D8 3996 aa6.92□□□□□ -1.3
RFC4-214ENST00000494047 A0A1B0GVY2 172 aa6.92□□□□□ -1.3
RFC4-214ENST00000494047 PSORS1C2Q9UIG4 136 aa6.92□□□□□ -1.3
RFC4-214ENST00000494047 FAT2Q9NYQ8 4349 aa6.92□□□□□ -1.3
RFC4-214ENST00000494047 PANO1I0J062 215 aa6.88□□□□□ -1.31
RFC4-214ENST00000494047 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
RFC4-214ENST00000494047 NDUFS5O43920 106 aa6.87□□□□□ -1.31
RFC4-214ENST00000494047 IGLV7-43P04211 117 aa6.87□□□□□ -1.31
RFC4-214ENST00000494047 COA5Q86WW8 74 aa6.87□□□□□ -1.31
RFC4-214ENST00000494047 PRR4Q16378 134 aa6.86□□□□□ -1.31
RFC4-214ENST00000494047 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
RFC4-214ENST00000494047 Q75L30 129 aa6.85□□□□□ -1.31
RFC4-214ENST00000494047 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
RFC4-214ENST00000494047 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
RFC4-214ENST00000494047 PKD1P98161 4303 aa6.84□□□□□ -1.31
RFC4-214ENST00000494047 PSPHP1O15172 72 aa6.82□□□□□ -1.32
RFC4-214ENST00000494047 Q5VV11 94 aa6.82□□□□□ -1.32
RFC4-214ENST00000494047 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
RFC4-214ENST00000494047 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
RFC4-214ENST00000494047 DYNC1H1Q14204 4646 aaKnown RBP6.8□□□□□ -1.32
RFC4-214ENST00000494047 A8MUN3 132 aa6.8□□□□□ -1.32
RFC4-214ENST00000494047 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
RFC4-214ENST00000494047 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
RFC4-214ENST00000494047 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
RFC4-214ENST00000494047 RYR1P21817 5038 aa6.79□□□□□ -1.32
RFC4-214ENST00000494047 HERC2O95714 4834 aa6.77□□□□□ -1.33
RFC4-214ENST00000494047 ACYP2P14621 99 aa6.77□□□□□ -1.33
RFC4-214ENST00000494047 PCOTHQ58A44 107 aa6.77□□□□□ -1.33
RFC4-214ENST00000494047 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
RFC4-214ENST00000494047 PCLOQ9Y6V0 5065 aa6.76□□□□□ -1.33
RFC4-214ENST00000494047 LINC00313P59037 77 aa6.74□□□□□ -1.33
RFC4-214ENST00000494047 KRTAP10-2P60368 255 aa6.74□□□□□ -1.33
RFC4-214ENST00000494047 CIRBP-AS1Q8TBR5 109 aa6.74□□□□□ -1.33
RFC4-214ENST00000494047 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
RFC4-214ENST00000494047 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
RFC4-214ENST00000494047 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
RFC4-214ENST00000494047 A6NED7 52 aa6.72□□□□□ -1.33
RFC4-214ENST00000494047 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
RFC4-214ENST00000494047 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.34
RFC4-214ENST00000494047 HRES1P13985 223 aa6.7□□□□□ -1.34
RFC4-214ENST00000494047 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
RFC4-214ENST00000494047 Q6ZSA8 131 aa6.7□□□□□ -1.34
RFC4-214ENST00000494047 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
RFC4-214ENST00000494047 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
RFC4-214ENST00000494047 C4orf48Q5BLP8 95 aa6.67□□□□□ -1.34
RFC4-214ENST00000494047 PRR26Q8N8Z3 221 aa6.67□□□□□ -1.34
RFC4-214ENST00000494047 HSPG2P98160 4391 aa6.66□□□□□ -1.34
RFC4-214ENST00000494047 Q8N1X5 172 aa6.66□□□□□ -1.34
RFC4-214ENST00000494047 ANAPC11Q9NYG5 84 aa6.66□□□□□ -1.34
RFC4-214ENST00000494047 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.34
RFC4-214ENST00000494047 SPINK1P00995 79 aa6.65□□□□□ -1.35
RFC4-214ENST00000494047 IGKV2-30P06310 120 aa6.65□□□□□ -1.35
RFC4-214ENST00000494047 SPAG11AQ6PDA7 123 aa6.65□□□□□ -1.35
RFC4-214ENST00000494047 KRTAP10-1P60331 282 aa6.64□□□□□ -1.35
RFC4-214ENST00000494047 Q5W150 140 aa6.64□□□□□ -1.35
RFC4-214ENST00000494047 A0A087X002 238 aa6.63□□□□□ -1.35
RFC4-214ENST00000494047 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
RFC4-214ENST00000494047 KTN1-AS1Q86SY8 53 aa6.62□□□□□ -1.35
RFC4-214ENST00000494047 SRRM2Q9UQ35 2752 aaKnown RBP6.62□□□□□ -1.35
RFC4-214ENST00000494047 LCE2BO14633 110 aa6.58□□□□□ -1.36
RFC4-214ENST00000494047 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
RFC4-214ENST00000494047 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
RFC4-214ENST00000494047 DNAH8Q96JB1 4490 aa6.57□□□□□ -1.36
RFC4-214ENST00000494047 LCA10Q71F78 164 aa6.57□□□□□ -1.36
RFC4-214ENST00000494047 SPTSSBQ8NFR3 76 aa6.57□□□□□ -1.36
RFC4-214ENST00000494047 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
RFC4-214ENST00000494047 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
RFC4-214ENST00000494047 A0A1B0GU69 56 aa6.55□□□□□ -1.36
RFC4-214ENST00000494047 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
RFC4-214ENST00000494047 KRTAP1-4P0C5Y4 121 aa6.54□□□□□ -1.36
RFC4-214ENST00000494047 Q5VSD8 79 aa6.54□□□□□ -1.36
RFC4-214ENST00000494047 C7orf65Q6ZTY9 151 aa6.53□□□□□ -1.36
RFC4-214ENST00000494047 A6NN06 94 aa6.52□□□□□ -1.37
RFC4-214ENST00000494047 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
RFC4-214ENST00000494047 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
RFC4-214ENST00000494047 SEC61GP60059 68 aa6.52□□□□□ -1.37
RFC4-214ENST00000494047 FAT1Q14517 4588 aa6.51□□□□□ -1.37
RFC4-214ENST00000494047 IGKV2D-30A0A075B6S6 120 aa6.51□□□□□ -1.37
RFC4-214ENST00000494047 UQCR11O14957 56 aa6.5□□□□□ -1.37
RFC4-214ENST00000494047 LINC00304Q8N9R0 145 aa6.49□□□□□ -1.37
RFC4-214ENST00000494047 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
RFC4-214ENST00000494047 SPINK7P58062 85 aa6.46□□□□□ -1.37
RFC4-214ENST00000494047 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
RFC4-214ENST00000494047 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
RFC4-214ENST00000494047 DMBT1Q9UGM3 2413 aaPredicted RBP6.41□□□□□ -1.38
RFC4-214ENST00000494047 A8MU10 97 aa6.41□□□□□ -1.38
RFC4-214ENST00000494047 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.39
RFC4-214ENST00000494047 KRTAP10-4P60372 401 aaPredicted RBP6.38□□□□□ -1.39
RFC4-214ENST00000494047 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
RFC4-214ENST00000494047 A8MUU9 505 aa6.37□□□□□ -1.39
RFC4-214ENST00000494047 RETNLBQ9BQ08 111 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms