RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 H0Y9P7 68 aa6.28□□□□□ -1.4
PHACTR4-204ENST00000493669 TRAV22A0A0B4J277 110 aa6.27□□□□□ -1.41
PHACTR4-204ENST00000493669 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
PHACTR4-204ENST00000493669 MRPL34Q9BQ48 92 aaKnown RBP6.27□□□□□ -1.41
PHACTR4-204ENST00000493669 LIMD2Q9BT23 127 aa6.27□□□□□ -1.41
PHACTR4-204ENST00000493669 OXTP01178 125 aa6.25□□□□□ -1.41
PHACTR4-204ENST00000493669 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
PHACTR4-204ENST00000493669 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
PHACTR4-204ENST00000493669 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
PHACTR4-204ENST00000493669 C1orf195Q5TG92 126 aa6.22□□□□□ -1.41
PHACTR4-204ENST00000493669 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
PHACTR4-204ENST00000493669 C1orf64Q8NEQ6 169 aa6.22□□□□□ -1.41
PHACTR4-204ENST00000493669 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
PHACTR4-204ENST00000493669 SPINK1P00995 79 aa6.22□□□□□ -1.41
PHACTR4-204ENST00000493669 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
PHACTR4-204ENST00000493669 CYP4F30PQ9H0H9 118 aa6.21□□□□□ -1.42
PHACTR4-204ENST00000493669 RPS29P62273 56 aaKnown RBP6.21□□□□□ -1.42
PHACTR4-204ENST00000493669 SPANXA2-OT1Q8N9U9 137 aa6.21□□□□□ -1.42
PHACTR4-204ENST00000493669 NDUFS5O43920 106 aa6.2□□□□□ -1.42
PHACTR4-204ENST00000493669 DYNC1H1Q14204 4646 aaKnown RBP6.2□□□□□ -1.42
PHACTR4-204ENST00000493669 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
PHACTR4-204ENST00000493669 SPAG11AQ6PDA7 123 aa6.19□□□□□ -1.42
PHACTR4-204ENST00000493669 RYR2Q92736 4967 aa6.18□□□□□ -1.42
PHACTR4-204ENST00000493669 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
PHACTR4-204ENST00000493669 LINC00313P59037 77 aa6.18□□□□□ -1.42
PHACTR4-204ENST00000493669 KRTAP10-4P60372 401 aaPredicted RBP6.17□□□□□ -1.42
PHACTR4-204ENST00000493669 SMR3BP02814 79 aaPredicted RBP6.17□□□□□ -1.42
PHACTR4-204ENST00000493669 LINC00304Q8N9R0 145 aa6.16□□□□□ -1.42
PHACTR4-204ENST00000493669 PRR26Q8N8Z3 221 aa6.14□□□□□ -1.43
PHACTR4-204ENST00000493669 Q8N9P0 234 aaPredicted RBP6.14□□□□□ -1.43
PHACTR4-204ENST00000493669 LOC101927531A0A1B0GV80 90 aa6.14□□□□□ -1.43
PHACTR4-204ENST00000493669 KRTAP13-3Q3SY46 172 aa6.13□□□□□ -1.43
PHACTR4-204ENST00000493669 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
PHACTR4-204ENST00000493669 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
PHACTR4-204ENST00000493669 FAM229AH3BQW9 127 aa6.11□□□□□ -1.43
PHACTR4-204ENST00000493669 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
PHACTR4-204ENST00000493669 FP248Q71RG6 208 aaPredicted RBP6.1□□□□□ -1.43
PHACTR4-204ENST00000493669 PRR4Q16378 134 aa6.09□□□□□ -1.43
PHACTR4-204ENST00000493669 Q5W150 140 aa6.09□□□□□ -1.43
PHACTR4-204ENST00000493669 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
PHACTR4-204ENST00000493669 PCOTHQ58A44 107 aa6.07□□□□□ -1.44
PHACTR4-204ENST00000493669 KMT2CQ8NEZ4 4911 aaKnown RBP6.07□□□□□ -1.44
PHACTR4-204ENST00000493669 C4orf26Q17RF5 130 aa6.05□□□□□ -1.44
PHACTR4-204ENST00000493669 FAT1Q14517 4588 aa6.03□□□□□ -1.44
PHACTR4-204ENST00000493669 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
PHACTR4-204ENST00000493669 IGKV2-30P06310 120 aa6.02□□□□□ -1.45
PHACTR4-204ENST00000493669 Q1T7F1 81 aa6.01□□□□□ -1.45
PHACTR4-204ENST00000493669 COA5Q86WW8 74 aa6□□□□□ -1.45
PHACTR4-204ENST00000493669 V9GYY9 64 aa5.99□□□□□ -1.45
PHACTR4-204ENST00000493669 MPLKIPQ8TAP9 179 aa5.99□□□□□ -1.45
PHACTR4-204ENST00000493669 Q5VSD8 79 aa5.98□□□□□ -1.45
PHACTR4-204ENST00000493669 RETNLBQ9BQ08 111 aa5.96□□□□□ -1.46
PHACTR4-204ENST00000493669 HRES1P13985 223 aa5.95□□□□□ -1.46
PHACTR4-204ENST00000493669 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
PHACTR4-204ENST00000493669 C20orf166-AS1Q96NR2 134 aa5.94□□□□□ -1.46
PHACTR4-204ENST00000493669 A8MUU9 505 aa5.93□□□□□ -1.46
PHACTR4-204ENST00000493669 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
PHACTR4-204ENST00000493669 ACYP2P14621 99 aa5.93□□□□□ -1.46
PHACTR4-204ENST00000493669 HSPG2P98160 4391 aa5.91□□□□□ -1.46
PHACTR4-204ENST00000493669 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
PHACTR4-204ENST00000493669 Q8N1X5 172 aa5.91□□□□□ -1.46
PHACTR4-204ENST00000493669 RYR3Q15413 4870 aa5.91□□□□□ -1.46
PHACTR4-204ENST00000493669 C7orf65Q6ZTY9 151 aa5.9□□□□□ -1.46
PHACTR4-204ENST00000493669 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
PHACTR4-204ENST00000493669 RYR1P21817 5038 aa5.89□□□□□ -1.47
PHACTR4-204ENST00000493669 C9orf92A6NGG3 77 aa5.89□□□□□ -1.47
PHACTR4-204ENST00000493669 Q75L30 129 aa5.86□□□□□ -1.47
PHACTR4-204ENST00000493669 LINC01558Q9Y6Z2 57 aa5.85□□□□□ -1.47
PHACTR4-204ENST00000493669 PSPHP1O15172 72 aa5.84□□□□□ -1.47
PHACTR4-204ENST00000493669 A8MUN3 132 aa5.83□□□□□ -1.48
PHACTR4-204ENST00000493669 TNXBP22105 4242 aa5.83□□□□□ -1.48
PHACTR4-204ENST00000493669 CHKB-CPT1BH3BT56 60 aa5.83□□□□□ -1.48
PHACTR4-204ENST00000493669 Q5VV11 94 aa5.82□□□□□ -1.48
PHACTR4-204ENST00000493669 PRR15LQ9BU68 103 aa5.81□□□□□ -1.48
PHACTR4-204ENST00000493669 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
PHACTR4-204ENST00000493669 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
PHACTR4-204ENST00000493669 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
PHACTR4-204ENST00000493669 LRP1Q07954 4544 aaKnown RBP5.79□□□□□ -1.48
PHACTR4-204ENST00000493669 MT1HL1P0DM35 61 aa5.79□□□□□ -1.48
PHACTR4-204ENST00000493669 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
PHACTR4-204ENST00000493669 KIAA1109Q2LD37 5005 aa5.76□□□□□ -1.49
PHACTR4-204ENST00000493669 SPINK7P58062 85 aa5.76□□□□□ -1.49
PHACTR4-204ENST00000493669 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
PHACTR4-204ENST00000493669 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
PHACTR4-204ENST00000493669 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
PHACTR4-204ENST00000493669 XP32Q5T750 250 aa5.71□□□□□ -1.49
PHACTR4-204ENST00000493669 SPTSSBQ8NFR3 76 aa5.7□□□□□ -1.5
PHACTR4-204ENST00000493669 A6NED7 52 aa5.68□□□□□ -1.5
PHACTR4-204ENST00000493669 EPPK1P58107 5090 aaKnown RBP5.68□□□□□ -1.5
PHACTR4-204ENST00000493669 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
PHACTR4-204ENST00000493669 A0A1B0GU69 56 aa5.67□□□□□ -1.5
PHACTR4-204ENST00000493669 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
PHACTR4-204ENST00000493669 TPRXLQ17RH7 258 aa5.65□□□□□ -1.5
PHACTR4-204ENST00000493669 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
PHACTR4-204ENST00000493669 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
PHACTR4-204ENST00000493669 LCA10Q71F78 164 aa5.61□□□□□ -1.51
PHACTR4-204ENST00000493669 KRTAP4-5Q9BYR2 181 aa5.6□□□□□ -1.51
PHACTR4-204ENST00000493669 SEC61GP60059 68 aa5.58□□□□□ -1.52
PHACTR4-204ENST00000493669 A8MU10 97 aa5.56□□□□□ -1.52
PHACTR4-204ENST00000493669 UQCR11O14957 56 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms