RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 Q6Q795 121 aa8.6□□□□□ -1.03
CDK11A-220ENST00000492390 M0R2T5 61 aa8.59□□□□□ -1.03
CDK11A-220ENST00000492390 A0A1B0GW54 56 aa8.58□□□□□ -1.04
CDK11A-220ENST00000492390 RPS29P62273 56 aaKnown RBP8.56□□□□□ -1.04
CDK11A-220ENST00000492390 TRBV7-7A0A0K0K1E9 115 aa8.55□□□□□ -1.04
CDK11A-220ENST00000492390 CD164Q04900 197 aa8.55□□□□□ -1.04
CDK11A-220ENST00000492390 LINC00846Q9NV44 126 aa8.55□□□□□ -1.04
CDK11A-220ENST00000492390 PCOTHQ58A44 107 aa8.53□□□□□ -1.04
CDK11A-220ENST00000492390 A0A087WSZ3 146 aa8.52□□□□□ -1.05
CDK11A-220ENST00000492390 HRCT1Q6UXD1 115 aa8.52□□□□□ -1.05
CDK11A-220ENST00000492390 UBL5Q9BZL1 73 aa8.49□□□□□ -1.05
CDK11A-220ENST00000492390 Q6ZVQ6 151 aa8.48□□□□□ -1.05
CDK11A-220ENST00000492390 SSPOA2VEC9 5147 aa8.48□□□□□ -1.05
CDK11A-220ENST00000492390 SS18L2Q9UHA2 77 aa8.47□□□□□ -1.05
CDK11A-220ENST00000492390 NREPQ16612 68 aa8.45□□□□□ -1.06
CDK11A-220ENST00000492390 USH2AO75445 5202 aa8.45□□□□□ -1.06
CDK11A-220ENST00000492390 Q5XG85 94 aa8.44□□□□□ -1.06
CDK11A-220ENST00000492390 LINC00643Q86TS7 51 aa8.44□□□□□ -1.06
CDK11A-220ENST00000492390 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
CDK11A-220ENST00000492390 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
CDK11A-220ENST00000492390 LIMD2Q9BT23 127 aa8.43□□□□□ -1.06
CDK11A-220ENST00000492390 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
CDK11A-220ENST00000492390 LINC00472Q9H8W2 130 aa8.4□□□□□ -1.06
CDK11A-220ENST00000492390 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
CDK11A-220ENST00000492390 Q96NJ1 140 aa8.39□□□□□ -1.07
CDK11A-220ENST00000492390 CXCL6P80162 114 aa8.37□□□□□ -1.07
CDK11A-220ENST00000492390 BPY2O14599 106 aa8.36□□□□□ -1.07
CDK11A-220ENST00000492390 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
CDK11A-220ENST00000492390 IGKV3D-7A0A0C4DH55 119 aa8.35□□□□□ -1.07
CDK11A-220ENST00000492390 MT-ATP8P03928 68 aa8.35□□□□□ -1.07
CDK11A-220ENST00000492390 C9orf92A6NGG3 77 aa8.34□□□□□ -1.07
CDK11A-220ENST00000492390 J3KT08 172 aa8.34□□□□□ -1.07
CDK11A-220ENST00000492390 DEFB116Q30KQ4 102 aa8.34□□□□□ -1.07
CDK11A-220ENST00000492390 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
CDK11A-220ENST00000492390 DSCR10P59022 87 aa8.32□□□□□ -1.08
CDK11A-220ENST00000492390 IGKV4-1P06312 121 aa8.31□□□□□ -1.08
CDK11A-220ENST00000492390 A8MWP4 228 aa8.29□□□□□ -1.08
CDK11A-220ENST00000492390 Q8N9L7 120 aa8.28□□□□□ -1.08
CDK11A-220ENST00000492390 IMUPQ9GZP8 106 aa8.28□□□□□ -1.08
CDK11A-220ENST00000492390 K7EQZ3 153 aa8.27□□□□□ -1.09
CDK11A-220ENST00000492390 HIST1H4AP62805 103 aaKnown RBP8.25□□□□□ -1.09
CDK11A-220ENST00000492390 NDUFB1O75438 58 aa8.24□□□□□ -1.09
CDK11A-220ENST00000492390 KRTAP19-1Q8IUB9 90 aa8.24□□□□□ -1.09
CDK11A-220ENST00000492390 PRR15Q8IV56 129 aa8.24□□□□□ -1.09
CDK11A-220ENST00000492390 A0A1B0GVX0 72 aa8.23□□□□□ -1.09
CDK11A-220ENST00000492390 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
CDK11A-220ENST00000492390 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
CDK11A-220ENST00000492390 A0A087WVE0 104 aa8.21□□□□□ -1.1
CDK11A-220ENST00000492390 SYNE2Q8WXH0 6885 aaKnown RBP8.2□□□□□ -1.1
CDK11A-220ENST00000492390 IGHV6-1A0A0B4J1U7 121 aa8.19□□□□□ -1.1
CDK11A-220ENST00000492390 MACF1Q9UPN3 7388 aaKnown RBP8.19□□□□□ -1.1
CDK11A-220ENST00000492390 MMP24-AS1A0A0U1RRL7 71 aa8.16□□□□□ -1.1
CDK11A-220ENST00000492390 HCG22E2RYF7 251 aa8.16□□□□□ -1.1
CDK11A-220ENST00000492390 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
CDK11A-220ENST00000492390 C8orf17Q9NRJ1 99 aa8.16□□□□□ -1.1
CDK11A-220ENST00000492390 FAM236AA0A1B0GUQ0 79 aa8.13□□□□□ -1.11
CDK11A-220ENST00000492390 FAM236BA0A1B0GV22 79 aa8.13□□□□□ -1.11
CDK11A-220ENST00000492390 NOTCH2NLQ7Z3S9 236 aa8.13□□□□□ -1.11
CDK11A-220ENST00000492390 WFDC13Q8IUB5 93 aa8.12□□□□□ -1.11
CDK11A-220ENST00000492390 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
CDK11A-220ENST00000492390 hDV103S1A0JD37 113 aa8.1□□□□□ -1.11
CDK11A-220ENST00000492390 LINC00313P59037 77 aa8.1□□□□□ -1.11
CDK11A-220ENST00000492390 LCE2BO14633 110 aa8.09□□□□□ -1.11
CDK11A-220ENST00000492390 SCGB1A1P11684 91 aa8.09□□□□□ -1.11
CDK11A-220ENST00000492390 TMEM254Q8TBM7 123 aa8.08□□□□□ -1.12
CDK11A-220ENST00000492390 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
CDK11A-220ENST00000492390 MRPL34Q9BQ48 92 aaKnown RBP8.05□□□□□ -1.12
CDK11A-220ENST00000492390 ATOX1O00244 68 aa8.03□□□□□ -1.12
CDK11A-220ENST00000492390 MT2AP02795 61 aa8.02□□□□□ -1.13
CDK11A-220ENST00000492390 KRTAP6-3Q3LI67 103 aa8□□□□□ -1.13
CDK11A-220ENST00000492390 Q8N9P0 234 aaPredicted RBP8□□□□□ -1.13
CDK11A-220ENST00000492390 KRTAP9-3Q9BYQ3 159 aa7.99□□□□□ -1.13
CDK11A-220ENST00000492390 OCR1Q9BZK8 76 aa7.98□□□□□ -1.13
CDK11A-220ENST00000492390 ATP11AUNQ6ZP68 121 aa7.97□□□□□ -1.13
CDK11A-220ENST00000492390 SMIM20Q8N5G0 67 aa7.97□□□□□ -1.13
CDK11A-220ENST00000492390 C20orf166-AS1Q96NR2 134 aa7.97□□□□□ -1.13
CDK11A-220ENST00000492390 NDUFS5O43920 106 aa7.96□□□□□ -1.14
CDK11A-220ENST00000492390 A8MUU9 505 aa7.95□□□□□ -1.14
CDK11A-220ENST00000492390 MT1FP04733 61 aa7.95□□□□□ -1.14
CDK11A-220ENST00000492390 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
CDK11A-220ENST00000492390 TRAV7A0A075B6U4 112 aa7.94□□□□□ -1.14
CDK11A-220ENST00000492390 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
CDK11A-220ENST00000492390 ANAPC13Q9BS18 74 aa7.93□□□□□ -1.14
CDK11A-220ENST00000492390 UQCRQO14949 82 aa7.92□□□□□ -1.14
CDK11A-220ENST00000492390 Q75L30 129 aa7.92□□□□□ -1.14
CDK11A-220ENST00000492390 KRTAP10-10P60014 251 aa7.91□□□□□ -1.14
CDK11A-220ENST00000492390 SERP2Q8N6R1 65 aa7.91□□□□□ -1.14
CDK11A-220ENST00000492390 TRAV22A0A0B4J277 110 aa7.86□□□□□ -1.15
CDK11A-220ENST00000492390 COX7CP15954 63 aa7.85□□□□□ -1.15
CDK11A-220ENST00000492390 Q5W150 140 aa7.85□□□□□ -1.15
CDK11A-220ENST00000492390 ZCCHC13Q8WW36 166 aaKnown RBP7.85□□□□□ -1.15
CDK11A-220ENST00000492390 H0Y9P7 68 aa7.84□□□□□ -1.15
CDK11A-220ENST00000492390 C5orf47Q569G3 176 aa7.84□□□□□ -1.15
CDK11A-220ENST00000492390 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
CDK11A-220ENST00000492390 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
CDK11A-220ENST00000492390 MP68P56378 58 aa7.8□□□□□ -1.16
CDK11A-220ENST00000492390 NEBP20929 6669 aa7.78□□□□□ -1.16
CDK11A-220ENST00000492390 H3BPC8 53 aa7.78□□□□□ -1.16
CDK11A-220ENST00000492390 PCP4P48539 62 aa7.77□□□□□ -1.17
CDK11A-220ENST00000492390 C20orf197Q8N268 126 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms