RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
SREBF2-208ENST00000491541 SACSQ9NZJ4 4579 aa6.27□□□□□ -1.41
SREBF2-208ENST00000491541 KRTAP10-11P60412 298 aa6.27□□□□□ -1.41
SREBF2-208ENST00000491541 NUPR2A6NF83 97 aa6.27□□□□□ -1.41
SREBF2-208ENST00000491541 PLA2G1BP04054 148 aaKnown RBP6.26□□□□□ -1.41
SREBF2-208ENST00000491541 IGLV5-52A0A0A0MRZ9 124 aa6.25□□□□□ -1.41
SREBF2-208ENST00000491541 C8orf87E5RJ46 101 aa6.25□□□□□ -1.41
SREBF2-208ENST00000491541 LINC00313P59037 77 aa6.25□□□□□ -1.41
SREBF2-208ENST00000491541 H3BS24 57 aa6.22□□□□□ -1.41
SREBF2-208ENST00000491541 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
SREBF2-208ENST00000491541 RTL8CO15255 209 aa6.22□□□□□ -1.41
SREBF2-208ENST00000491541 C1orf134Q5TEV5 83 aa6.21□□□□□ -1.42
SREBF2-208ENST00000491541 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
SREBF2-208ENST00000491541 K7EIL1 84 aa6.2□□□□□ -1.42
SREBF2-208ENST00000491541 HRES1P13985 223 aa6.2□□□□□ -1.42
SREBF2-208ENST00000491541 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
SREBF2-208ENST00000491541 DMBT1Q9UGM3 2413 aaPredicted RBP6.19□□□□□ -1.42
SREBF2-208ENST00000491541 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
SREBF2-208ENST00000491541 ZNF706Q9Y5V0 76 aaPredicted RBP6.17□□□□□ -1.42
SREBF2-208ENST00000491541 A0A1B0GU69 56 aa6.16□□□□□ -1.42
SREBF2-208ENST00000491541 DMAC1Q96GE9 116 aa6.16□□□□□ -1.42
SREBF2-208ENST00000491541 TENM1Q9UKZ4 2725 aa6.16□□□□□ -1.42
SREBF2-208ENST00000491541 TENM3Q9P273 2699 aa6.16□□□□□ -1.42
SREBF2-208ENST00000491541 C8orf17Q9NRJ1 99 aa6.16□□□□□ -1.42
SREBF2-208ENST00000491541 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
SREBF2-208ENST00000491541 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
SREBF2-208ENST00000491541 NBDYA0A0U1RRE5 68 aa6.14□□□□□ -1.43
SREBF2-208ENST00000491541 FBN1P35555 2871 aaKnown RBP6.14□□□□□ -1.43
SREBF2-208ENST00000491541 ACYP2P14621 99 aa6.12□□□□□ -1.43
SREBF2-208ENST00000491541 MRPL34Q9BQ48 92 aaKnown RBP6.12□□□□□ -1.43
SREBF2-208ENST00000491541 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
SREBF2-208ENST00000491541 OTOGQ6ZRI0 2925 aa6.1□□□□□ -1.43
SREBF2-208ENST00000491541 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
SREBF2-208ENST00000491541 PKD1P98161 4303 aa6.09□□□□□ -1.43
SREBF2-208ENST00000491541 A0A1B0GVX0 72 aa6.09□□□□□ -1.43
SREBF2-208ENST00000491541 SPACA4Q8TDM5 124 aa6.09□□□□□ -1.43
SREBF2-208ENST00000491541 ANAPC11Q9NYG5 84 aa6.08□□□□□ -1.44
SREBF2-208ENST00000491541 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
SREBF2-208ENST00000491541 SPINK1P00995 79 aa6.08□□□□□ -1.44
SREBF2-208ENST00000491541 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
SREBF2-208ENST00000491541 WWC2-AS2Q96NR7 200 aa6.07□□□□□ -1.44
SREBF2-208ENST00000491541 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
SREBF2-208ENST00000491541 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
SREBF2-208ENST00000491541 KMT2AQ03164 3969 aa6.06□□□□□ -1.44
SREBF2-208ENST00000491541 NOTCH2NLQ7Z3S9 236 aa6.05□□□□□ -1.44
SREBF2-208ENST00000491541 UQCR11O14957 56 aa6.04□□□□□ -1.44
SREBF2-208ENST00000491541 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
SREBF2-208ENST00000491541 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
SREBF2-208ENST00000491541 K7ERS5 55 aa6.02□□□□□ -1.45
SREBF2-208ENST00000491541 FBN3Q75N90 2809 aa6.01□□□□□ -1.45
SREBF2-208ENST00000491541 PLECQ15149 4684 aaKnown RBP6□□□□□ -1.45
SREBF2-208ENST00000491541 COL7A1Q02388 2944 aa6□□□□□ -1.45
SREBF2-208ENST00000491541 HSPG2P98160 4391 aa6□□□□□ -1.45
SREBF2-208ENST00000491541 Q5W150 140 aa6□□□□□ -1.45
SREBF2-208ENST00000491541 DNAH5Q8TE73 4624 aa5.98□□□□□ -1.45
SREBF2-208ENST00000491541 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
SREBF2-208ENST00000491541 TNXBP22105 4242 aa5.97□□□□□ -1.45
SREBF2-208ENST00000491541 KRTAP1-5Q9BYS1 174 aa5.97□□□□□ -1.45
SREBF2-208ENST00000491541 A0A087WTM6 91 aa5.96□□□□□ -1.45
SREBF2-208ENST00000491541 J3QL48 77 aa5.96□□□□□ -1.46
SREBF2-208ENST00000491541 FAT2Q9NYQ8 4349 aa5.96□□□□□ -1.46
SREBF2-208ENST00000491541 APLNQ9ULZ1 77 aa5.95□□□□□ -1.46
SREBF2-208ENST00000491541 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
SREBF2-208ENST00000491541 TYMSOSQ8TAI1 123 aa5.93□□□□□ -1.46
SREBF2-208ENST00000491541 PANO1I0J062 215 aa5.93□□□□□ -1.46
SREBF2-208ENST00000491541 RPS29P62273 56 aaKnown RBP5.93□□□□□ -1.46
SREBF2-208ENST00000491541 PSORS1C2Q9UIG4 136 aa5.93□□□□□ -1.46
SREBF2-208ENST00000491541 ZNF861PO60384 105 aa5.9□□□□□ -1.47
SREBF2-208ENST00000491541 FAM229AH3BQW9 127 aa5.89□□□□□ -1.47
SREBF2-208ENST00000491541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.89□□□□□ -1.47
SREBF2-208ENST00000491541 CRIPTQ9P021 101 aa5.87□□□□□ -1.47
SREBF2-208ENST00000491541 IGLV7-43P04211 117 aa5.86□□□□□ -1.47
SREBF2-208ENST00000491541 APOBP04114 4563 aaKnown RBP5.86□□□□□ -1.47
SREBF2-208ENST00000491541 STARD9Q9P2P6 4700 aa5.85□□□□□ -1.47
SREBF2-208ENST00000491541 SSBP3-AS1Q7Z2R9 100 aa5.85□□□□□ -1.47
SREBF2-208ENST00000491541 Q8N1X5 172 aa5.84□□□□□ -1.47
SREBF2-208ENST00000491541 A8MUU9 505 aa5.82□□□□□ -1.48
SREBF2-208ENST00000491541 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
SREBF2-208ENST00000491541 TGP01266 2768 aa5.82□□□□□ -1.48
SREBF2-208ENST00000491541 Q6ZSA8 131 aa5.79□□□□□ -1.48
SREBF2-208ENST00000491541 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
SREBF2-208ENST00000491541 LINC00304Q8N9R0 145 aa5.74□□□□□ -1.49
SREBF2-208ENST00000491541 ROMO1P60602 79 aa5.72□□□□□ -1.49
SREBF2-208ENST00000491541 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
SREBF2-208ENST00000491541 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
SREBF2-208ENST00000491541 KRTAP3-2Q9BYR7 98 aa5.72□□□□□ -1.49
SREBF2-208ENST00000491541 A0A1B0GU33 70 aa5.69□□□□□ -1.5
SREBF2-208ENST00000491541 KRTAP1-4P0C5Y4 121 aa5.68□□□□□ -1.5
SREBF2-208ENST00000491541 KRTAP21-3Q3LHN1 58 aa5.68□□□□□ -1.5
SREBF2-208ENST00000491541 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
SREBF2-208ENST00000491541 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
SREBF2-208ENST00000491541 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
SREBF2-208ENST00000491541 H0YAA0 97 aa5.65□□□□□ -1.5
SREBF2-208ENST00000491541 KRTAP13-2Q52LG2 175 aa5.65□□□□□ -1.5
SREBF2-208ENST00000491541 MYCBP2O75592 4640 aa5.61□□□□□ -1.51
SREBF2-208ENST00000491541 KRTAP10-1P60331 282 aa5.61□□□□□ -1.51
SREBF2-208ENST00000491541 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
SREBF2-208ENST00000491541 A0A0D9SG42 100 aa5.6□□□□□ -1.51
SREBF2-208ENST00000491541 LRP1BQ9NZR2 4599 aa5.59□□□□□ -1.51
SREBF2-208ENST00000491541 COX6B2Q6YFQ2 88 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms