RNA–Protein interactions for RNA: ENST00000491381.5

SNX21-212, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-212ENST00000491381 C8orf17Q9NRJ1 99 aa12.27□□□□□ -0.44
SNX21-212ENST00000491381 IGHV6-1A0A0B4J1U7 121 aa12.26□□□□□ -0.45
SNX21-212ENST00000491381 CASC2Q6XLA1 102 aa12.26□□□□□ -0.45
SNX21-212ENST00000491381 WFDC13Q8IUB5 93 aa12.25□□□□□ -0.45
SNX21-212ENST00000491381 TRAV7A0A075B6U4 112 aa12.24□□□□□ -0.45
SNX21-212ENST00000491381 TNXBP22105 4242 aa12.23□□□□□ -0.45
SNX21-212ENST00000491381 hDV103S1A0JD37 113 aa12.22□□□□□ -0.45
SNX21-212ENST00000491381 C8orf87E5RJ46 101 aa12.22□□□□□ -0.45
SNX21-212ENST00000491381 COX7CP15954 63 aa12.22□□□□□ -0.45
SNX21-212ENST00000491381 FAT3Q8TDW7 4589 aa12.22□□□□□ -0.45
SNX21-212ENST00000491381 OCR1Q9BZK8 76 aa12.22□□□□□ -0.45
SNX21-212ENST00000491381 LRP1Q07954 4544 aaKnown RBP12.2□□□□□ -0.46
SNX21-212ENST00000491381 UQCRQO14949 82 aa12.19□□□□□ -0.46
SNX21-212ENST00000491381 TMEM254Q8TBM7 123 aa12.17□□□□□ -0.46
SNX21-212ENST00000491381 OXTP01178 125 aa12.16□□□□□ -0.46
SNX21-212ENST00000491381 NOTCH2NLQ7Z3S9 236 aa12.15□□□□□ -0.46
SNX21-212ENST00000491381 CCDC179H3BU77 68 aa12.15□□□□□ -0.47
SNX21-212ENST00000491381 MT1HL1P0DM35 61 aa12.14□□□□□ -0.47
SNX21-212ENST00000491381 LINC00313P59037 77 aa12.13□□□□□ -0.47
SNX21-212ENST00000491381 BIRC6Q9NR09 4857 aa12.13□□□□□ -0.47
SNX21-212ENST00000491381 FLG2Q5D862 2391 aaPredicted RBP12.12□□□□□ -0.47
SNX21-212ENST00000491381 MRPL34Q9BQ48 92 aaKnown RBP12.12□□□□□ -0.47
SNX21-212ENST00000491381 KRTAP4-5Q9BYR2 181 aa12.11□□□□□ -0.47
SNX21-212ENST00000491381 TP53AIP1Q9HCN2 124 aa12.06□□□□□ -0.48
SNX21-212ENST00000491381 C5orf47Q569G3 176 aa12.02□□□□□ -0.49
SNX21-212ENST00000491381 KRTAP16-1A8MUX0 517 aa12.01□□□□□ -0.49
SNX21-212ENST00000491381 RETNLBQ9BQ08 111 aa12□□□□□ -0.49
SNX21-212ENST00000491381 MYCBP2O75592 4640 aa12□□□□□ -0.49
SNX21-212ENST00000491381 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
SNX21-212ENST00000491381 C20orf197Q8N268 126 aa12□□□□□ -0.49
SNX21-212ENST00000491381 Q8N9P0 234 aaPredicted RBP12□□□□□ -0.49
SNX21-212ENST00000491381 NDUFS5O43920 106 aa11.98□□□□□ -0.49
SNX21-212ENST00000491381 HERC2O95714 4834 aa11.98□□□□□ -0.49
SNX21-212ENST00000491381 KLKP1Q107X0 134 aa11.97□□□□□ -0.49
SNX21-212ENST00000491381 DMBT1Q9UGM3 2413 aaPredicted RBP11.96□□□□□ -0.5
SNX21-212ENST00000491381 A0A0U1RQV1 116 aa11.93□□□□□ -0.5
SNX21-212ENST00000491381 MP68P56378 58 aa11.93□□□□□ -0.5
SNX21-212ENST00000491381 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
SNX21-212ENST00000491381 H3BPC8 53 aa11.92□□□□□ -0.5
SNX21-212ENST00000491381 H0Y9P7 68 aa11.9□□□□□ -0.5
SNX21-212ENST00000491381 SNURFQ9Y675 71 aa11.89□□□□□ -0.51
SNX21-212ENST00000491381 ZCCHC13Q8WW36 166 aaKnown RBP11.86□□□□□ -0.51
SNX21-212ENST00000491381 CYSTM1Q9H1C7 97 aa11.86□□□□□ -0.51
SNX21-212ENST00000491381 NDUFC1O43677 76 aa11.85□□□□□ -0.51
SNX21-212ENST00000491381 C9orf92A6NGG3 77 aa11.84□□□□□ -0.51
SNX21-212ENST00000491381 IGLV7-46A0A075B6I9 117 aa11.82□□□□□ -0.52
SNX21-212ENST00000491381 KRTAP13-3Q3SY46 172 aa11.82□□□□□ -0.52
SNX21-212ENST00000491381 LINC00208Q96KT6 92 aa11.82□□□□□ -0.52
SNX21-212ENST00000491381 C20orf166-AS1Q96NR2 134 aa11.82□□□□□ -0.52
SNX21-212ENST00000491381 A8MUU9 505 aa11.8□□□□□ -0.52
SNX21-212ENST00000491381 Q5W150 140 aa11.8□□□□□ -0.52
SNX21-212ENST00000491381 ABCA13Q86UQ4 5058 aa11.8□□□□□ -0.52
SNX21-212ENST00000491381 H7BZZ5 65 aa11.78□□□□□ -0.52
SNX21-212ENST00000491381 C1orf64Q8NEQ6 169 aa11.78□□□□□ -0.52
SNX21-212ENST00000491381 J3QL48 77 aa11.78□□□□□ -0.52
SNX21-212ENST00000491381 TMEM258P61165 79 aa11.74□□□□□ -0.53
SNX21-212ENST00000491381 LOC101927531A0A1B0GV80 90 aa11.72□□□□□ -0.53
SNX21-212ENST00000491381 Q75L30 129 aa11.72□□□□□ -0.53
SNX21-212ENST00000491381 PRR4Q16378 134 aa11.71□□□□□ -0.53
SNX21-212ENST00000491381 TPRXLQ17RH7 258 aa11.66□□□□□ -0.54
SNX21-212ENST00000491381 XP32Q5T750 250 aa11.63□□□□□ -0.55
SNX21-212ENST00000491381 IGKV2-30P06310 120 aa11.62□□□□□ -0.55
SNX21-212ENST00000491381 CYP4F30PQ9H0H9 118 aa11.61□□□□□ -0.55
SNX21-212ENST00000491381 ATP5EP56381 51 aaPredicted RBP11.6□□□□□ -0.55
SNX21-212ENST00000491381 FAM236DA0A1B0GTK5 79 aa11.59□□□□□ -0.55
SNX21-212ENST00000491381 FAM236CP0DP71 79 aa11.59□□□□□ -0.55
SNX21-212ENST00000491381 RPL37P61927 97 aaKnown RBP11.59□□□□□ -0.55
SNX21-212ENST00000491381 SPANXA2-OT1Q8N9U9 137 aa11.57□□□□□ -0.56
SNX21-212ENST00000491381 PCOTHQ58A44 107 aa11.53□□□□□ -0.56
SNX21-212ENST00000491381 ATP11AUNQ6ZP68 121 aa11.52□□□□□ -0.57
SNX21-212ENST00000491381 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
SNX21-212ENST00000491381 C7orf65Q6ZTY9 151 aa11.51□□□□□ -0.57
SNX21-212ENST00000491381 HRES1P13985 223 aa11.42□□□□□ -0.58
SNX21-212ENST00000491381 PCLOQ9Y6V0 5065 aa11.39□□□□□ -0.59
SNX21-212ENST00000491381 SPINK7P58062 85 aa11.38□□□□□ -0.59
SNX21-212ENST00000491381 RPS28P62857 69 aaKnown RBP11.36□□□□□ -0.59
SNX21-212ENST00000491381 SERP1Q9Y6X1 66 aa11.36□□□□□ -0.59
SNX21-212ENST00000491381 LPAP08519 4548 aa11.31□□□□□ -0.6
SNX21-212ENST00000491381 DMAC1Q96GE9 116 aa11.27□□□□□ -0.6
SNX21-212ENST00000491381 LRP2P98164 4655 aa11.27□□□□□ -0.6
SNX21-212ENST00000491381 SEC61BP60468 96 aaKnown RBP11.24□□□□□ -0.61
SNX21-212ENST00000491381 ACYP2P14621 99 aa11.21□□□□□ -0.61
SNX21-212ENST00000491381 A8MUN3 132 aa11.2□□□□□ -0.62
SNX21-212ENST00000491381 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
SNX21-212ENST00000491381 COA5Q86WW8 74 aa11.17□□□□□ -0.62
SNX21-212ENST00000491381 COX6B2Q6YFQ2 88 aa11.13□□□□□ -0.63
SNX21-212ENST00000491381 HERC1Q15751 4861 aa11.11□□□□□ -0.63
SNX21-212ENST00000491381 MUC17Q685J3 4493 aa11.11□□□□□ -0.63
SNX21-212ENST00000491381 KRTAP3-1Q9BYR8 98 aa11.07□□□□□ -0.64
SNX21-212ENST00000491381 HMCN2Q8NDA2 5059 aa11.07□□□□□ -0.64
SNX21-212ENST00000491381 SMIM26A0A096LP01 95 aa11.06□□□□□ -0.64
SNX21-212ENST00000491381 MPLKIPQ8TAP9 179 aa11.03□□□□□ -0.64
SNX21-212ENST00000491381 CHKB-CPT1BH3BT56 60 aa10.99□□□□□ -0.65
SNX21-212ENST00000491381 RBM12B-AS1Q9P1G2 102 aa10.96□□□□□ -0.65
SNX21-212ENST00000491381 KRTAP4-1Q9BYQ7 146 aa10.93□□□□□ -0.66
SNX21-212ENST00000491381 Q1T7F1 81 aa10.86□□□□□ -0.67
SNX21-212ENST00000491381 H1FX-AS1Q4G0G2 97 aa10.85□□□□□ -0.67
SNX21-212ENST00000491381 V9GYY9 64 aa10.84□□□□□ -0.67
SNX21-212ENST00000491381 SPTSSBQ8NFR3 76 aa10.84□□□□□ -0.67
SNX21-212ENST00000491381 LINC01558Q9Y6Z2 57 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms