RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 IGLV5-48A0A075B6I7 105 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 GVQW2A0A096LPI5 108 aaPredicted RBP1.13□□□□□ -2.23
HMGN1-218ENST00000490032 IGKV3OR2-268A0A0C4DH90 116 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 ANGP03950 147 aaKnown RBP1.13□□□□□ -2.23
HMGN1-218ENST00000490032 COX6A2Q02221 97 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 SPINK13Q1W4C9 94 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 WFDC10BQ8IUB3 73 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 SPRR4Q96PI1 79 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 CYSTM1Q9H1C7 97 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 CRIPTQ9P021 101 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 PRO0255Q9UI72 69 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 WDFY3Q8IZQ1 3526 aa1.13□□□□□ -2.23
HMGN1-218ENST00000490032 ROMO1P60602 79 aa1.12□□□□□ -2.23
HMGN1-218ENST00000490032 FAM229BQ4G0N7 80 aa1.12□□□□□ -2.23
HMGN1-218ENST00000490032 C6orf48Q9UBA6 75 aa1.12□□□□□ -2.23
HMGN1-218ENST00000490032 FAM215AQ9Y5M1 114 aa1.12□□□□□ -2.23
HMGN1-218ENST00000490032 RELNP78509 3460 aa1.12□□□□□ -2.23
HMGN1-218ENST00000490032 RTTNQ86VV8 2226 aa1.12□□□□□ -2.23
HMGN1-218ENST00000490032 ZFHX3Q15911 3703 aa1.12□□□□□ -2.23
HMGN1-218ENST00000490032 ADGRG4Q8IZF6 3080 aa1.12□□□□□ -2.23
HMGN1-218ENST00000490032 LAMA1P25391 3075 aa1.11□□□□□ -2.23
HMGN1-218ENST00000490032 NSD1Q96L73 2696 aaPredicted RBP1.11□□□□□ -2.23
HMGN1-218ENST00000490032 ODF3BA8MYP8 253 aa1.11□□□□□ -2.23
HMGN1-218ENST00000490032 LUZP6Q538Z0 58 aa1.11□□□□□ -2.23
HMGN1-218ENST00000490032 C5orf56Q8N8D9 126 aa1.11□□□□□ -2.23
HMGN1-218ENST00000490032 R4GN34 69 aa1.11□□□□□ -2.23
HMGN1-218ENST00000490032 CELSR2Q9HCU4 2923 aa1.11□□□□□ -2.23
HMGN1-218ENST00000490032 BOD1L1Q8NFC6 3051 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 UTP20O75691 2785 aaKnown RBP1.1□□□□□ -2.23
HMGN1-218ENST00000490032 NIPBLQ6KC79 2804 aaeCLIP1.1□□□□□ -2.23
HMGN1-218ENST00000490032 DNAJC13O75165 2243 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 NUPR2A6NF83 97 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 LYNX1G3V0Z9 82 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 TFF1P04155 84 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 IGLV7-43P04211 117 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 PRB3Q04118 309 aaPredicted RBP1.1□□□□□ -2.23
HMGN1-218ENST00000490032 CSAG1Q6PB30 78 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 COX6B2Q6YFQ2 88 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 WFDC13Q8IUB5 93 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 DEFB104AQ8WTQ1 72 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 MRPL34Q9BQ48 92 aaKnown RBP1.1□□□□□ -2.23
HMGN1-218ENST00000490032 NOP10Q9NPE3 64 aaKnown RBP1.1□□□□□ -2.23
HMGN1-218ENST00000490032 NOTCH1P46531 2555 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 CSMD1Q96PZ7 3565 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 NBPF19A0A087WUL8 3843 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 MUC4Q99102 2169 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 TLN2Q9Y4G6 2542 aa1.1□□□□□ -2.23
HMGN1-218ENST00000490032 FLNAP21333 2647 aaKnown RBP1.09□□□□□ -2.23
HMGN1-218ENST00000490032 CNTRLQ7Z7A1 2325 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 A8MTW9 85 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 B4DSR2 109 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 G3V318 75 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 H3BNG1 76 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 IGLV1-51P01701 117 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 SPART-AS1P0CW21 52 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 KRTAP25-1Q3LHN0 102 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 LELP1Q5T871 98 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 Q6ZRX8 168 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 C9orf163Q8N9P6 203 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 CCL19Q99731 98 aa1.09□□□□□ -2.23
HMGN1-218ENST00000490032 SONP18583 2426 aaKnown RBP1.09□□□□□ -2.24
HMGN1-218ENST00000490032 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.09□□□□□ -2.243e-13■■■■■ 41.4
HMGN1-218ENST00000490032 MGAM2Q2M2H8 2515 aa1.09□□□□□ -2.24
HMGN1-218ENST00000490032 AKAP6Q13023 2319 aa1.08□□□□□ -2.24
HMGN1-218ENST00000490032 K7EQZ3 153 aa1.08□□□□□ -2.24
HMGN1-218ENST00000490032 DEFB130BP0DP73 79 aa1.08□□□□□ -2.24
HMGN1-218ENST00000490032 DEFB130AP0DP74 79 aa1.08□□□□□ -2.24
HMGN1-218ENST00000490032 UNQ6190/PRO20217Q6UXQ8 127 aa1.08□□□□□ -2.24
HMGN1-218ENST00000490032 SSBP3-AS1Q7Z2R9 100 aa1.08□□□□□ -2.24
HMGN1-218ENST00000490032 WNK1Q9H4A3 2382 aa1.08□□□□□ -2.24
HMGN1-218ENST00000490032 CELSR1Q9NYQ6 3014 aa1.08□□□□□ -2.24
HMGN1-218ENST00000490032 A0A1B0GU33 70 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 A0A1W2PNM2 257 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 LYNX1P0DP58 116 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 SPINK7P58062 85 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 PCOTHQ58A44 107 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 PLAC8Q9NZF1 115 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 CSMD2Q7Z408 3487 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 CRYBG3Q68DQ2 2970 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 MXRA5Q9NR99 2828 aa1.07□□□□□ -2.24
HMGN1-218ENST00000490032 SPENQ96T58 3664 aaKnown RBP1.06□□□□□ -2.24
HMGN1-218ENST00000490032 A0A096LNT2 108 aa1.06□□□□□ -2.24
HMGN1-218ENST00000490032 LY6G6CO95867 125 aa1.06□□□□□ -2.24
HMGN1-218ENST00000490032 C20orf166-AS1Q96NR2 134 aa1.06□□□□□ -2.24
HMGN1-218ENST00000490032 CADP27708 2225 aa1.05□□□□□ -2.24
HMGN1-218ENST00000490032 ABCA1O95477 2261 aa1.05□□□□□ -2.24
HMGN1-218ENST00000490032 PSORS1C2Q9UIG4 136 aa1.05□□□□□ -2.24
HMGN1-218ENST00000490032 MEGF8Q7Z7M0 2845 aa1.05□□□□□ -2.24
HMGN1-218ENST00000490032 TACC2O95359 2948 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 DNHD1Q96M86 4753 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 SPRR1BP22528 89 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 SPRR1AP35321 89 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 PLAC4Q8WY50 150 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 LINC00472Q9H8W2 130 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 BSNQ9UPA5 3926 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 PKD1L1Q8TDX9 2849 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 ROS1P08922 2347 aa1.04□□□□□ -2.24
HMGN1-218ENST00000490032 NBEAL2Q6ZNJ1 2754 aa1.03□□□□□ -2.24
HMGN1-218ENST00000490032 PRRC2CQ9Y520 2896 aaKnown RBP1.03□□□□□ -2.24
HMGN1-218ENST00000490032 M0R2N4 97 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms