RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 TNP1P09430 55 aa0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 HTN3P15516 51 aa0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 GVINP1Q7Z2Y8 2422 aa0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 FAM186AA6NE01 2351 aa0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 C2CD3Q4AC94 2353 aa0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 VWFP04275 2813 aa0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 CELSR2Q9HCU4 2923 aa0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 NAV2Q8IVL1 2488 aa0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 DSPP15924 2871 aaKnown RBP0.71□□□□□ -2.3
HNRNPU-211ENST00000489705 SPG11Q96JI7 2443 aa0.7□□□□□ -2.3
HNRNPU-211ENST00000489705 MAP1AP78559 2803 aaPredicted RBP0.7□□□□□ -2.3
HNRNPU-211ENST00000489705 NCOR1O75376 2440 aa0.7□□□□□ -2.3
HNRNPU-211ENST00000489705 SRRM2Q9UQ35 2752 aaKnown RBP0.69□□□□□ -2.3
HNRNPU-211ENST00000489705 PTPN13Q12923 2485 aa0.69□□□□□ -2.3
HNRNPU-211ENST00000489705 DEFB135Q30KP9 77 aa0.69□□□□□ -2.3
HNRNPU-211ENST00000489705 UTP20O75691 2785 aaKnown RBP0.69□□□□□ -2.3
HNRNPU-211ENST00000489705 ANKHD1Q8IWZ3 2542 aaKnown RBP0.69□□□□□ -2.3
HNRNPU-211ENST00000489705 TTC28Q96AY4 2481 aa0.69□□□□□ -2.3
HNRNPU-211ENST00000489705 CEP350Q5VT06 3117 aa0.68□□□□□ -2.3
HNRNPU-211ENST00000489705 ITPR1Q14643 2758 aa0.68□□□□□ -2.3
HNRNPU-211ENST00000489705 NBEAQ8NFP9 2946 aa0.68□□□□□ -2.3
HNRNPU-211ENST00000489705 RIF1Q5UIP0 2472 aaKnown RBP0.67□□□□□ -2.3
HNRNPU-211ENST00000489705 ABCA12Q86UK0 2595 aa0.67□□□□□ -2.3
HNRNPU-211ENST00000489705 AKAP13Q12802 2813 aa0.67□□□□□ -2.3
HNRNPU-211ENST00000489705 ITPR3Q14573 2671 aa0.67□□□□□ -2.3
HNRNPU-211ENST00000489705 PKD1L2Q7Z442 2459 aa0.67□□□□□ -2.3
HNRNPU-211ENST00000489705 MEGF8Q7Z7M0 2845 aa0.67□□□□□ -2.3
HNRNPU-211ENST00000489705 CACNA1AO00555 2505 aa0.66□□□□□ -2.3
HNRNPU-211ENST00000489705 DEFB4AO15263 64 aa0.66□□□□□ -2.3
HNRNPU-211ENST00000489705 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
HNRNPU-211ENST00000489705 COL6A3P12111 3177 aa0.66□□□□□ -2.3
HNRNPU-211ENST00000489705 ZZEF1O43149 2961 aa0.65□□□□□ -2.31
HNRNPU-211ENST00000489705 SETD2Q9BYW2 2564 aaPredicted RBP0.65□□□□□ -2.31
HNRNPU-211ENST00000489705 LRBAP50851 2863 aa0.65□□□□□ -2.31
HNRNPU-211ENST00000489705 SONP18583 2426 aaKnown RBP0.65□□□□□ -2.31
HNRNPU-211ENST00000489705 HIVEP3Q5T1R4 2406 aa0.65□□□□□ -2.31
HNRNPU-211ENST00000489705 LRRK2Q5S007 2527 aa0.65□□□□□ -2.31
HNRNPU-211ENST00000489705 CENPEQ02224 2701 aa0.65□□□□□ -2.31
HNRNPU-211ENST00000489705 TRANK1O15050 2925 aa0.65□□□□□ -2.31
HNRNPU-211ENST00000489705 DOPEY1Q5JWR5 2465 aa0.64□□□□□ -2.31
HNRNPU-211ENST00000489705 USP9YO00507 2555 aaPredicted RBP0.64□□□□□ -2.31
HNRNPU-211ENST00000489705 SETXQ7Z333 2677 aaKnown RBP0.64□□□□□ -2.31
HNRNPU-211ENST00000489705 ZNF292O60281 2723 aa0.64□□□□□ -2.31
HNRNPU-211ENST00000489705 PIEZO1Q92508 2521 aa0.64□□□□□ -2.31
HNRNPU-211ENST00000489705 DMBT1Q9UGM3 2413 aaPredicted RBP0.64□□□□□ -2.31
HNRNPU-211ENST00000489705 PRUNE2Q8WUY3 3088 aa0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 KALRNO60229 2985 aa0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 CELSR1Q9NYQ6 3014 aa0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 APCP25054 2843 aa0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 TEP1Q99973 2627 aaKnown RBP0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 USP24Q9UPU5 2620 aa0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 TLN1Q9Y490 2541 aaKnown RBP0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 M0R2T5 61 aa0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 CHD9Q3L8U1 2897 aa0.63□□□□□ -2.31
HNRNPU-211ENST00000489705 CRYBG3Q68DQ2 2970 aa0.62□□□□□ -2.31
HNRNPU-211ENST00000489705 TEX15Q9BXT5 2789 aa0.62□□□□□ -2.31
HNRNPU-211ENST00000489705 SMR3AQ99954 134 aa0.62□□□□□ -2.31
HNRNPU-211ENST00000489705 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
HNRNPU-211ENST00000489705 USP9XQ93008 2570 aaPredicted RBP0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 CFAP54Q96N23 3096 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 CFAP46Q8IYW2 2715 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 HECTD1Q9ULT8 2610 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 TGP01266 2768 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 KRTAP8-1Q8IUC2 63 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 EPG5Q9HCE0 2579 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 REV3LO60673 3130 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 SPTAN1Q13813 2472 aaKnown RBP0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 TLN2Q9Y4G6 2542 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 BOD1L1Q8NFC6 3051 aa0.61□□□□□ -2.31
HNRNPU-211ENST00000489705 ACANP16112 2415 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 CHD8Q9HCK8 2581 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 FRYLO94915 3013 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 TRIOO75962 3097 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 NF1P21359 2839 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 NIPBLQ6KC79 2804 aaeCLIP0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 MYO18BQ8IUG5 2567 aa0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 ANKRD11Q6UB99 2663 aaPredicted RBP0.6□□□□□ -2.31
HNRNPU-211ENST00000489705 TACC2O95359 2948 aa0.59□□□□□ -2.31
HNRNPU-211ENST00000489705 COL7A1Q02388 2944 aa0.59□□□□□ -2.31
HNRNPU-211ENST00000489705 TENM4Q6N022 2769 aa0.59□□□□□ -2.31
HNRNPU-211ENST00000489705 NBEAL1Q6ZS30 2694 aa0.59□□□□□ -2.31
HNRNPU-211ENST00000489705 ZFYVE26Q68DK2 2539 aa0.59□□□□□ -2.31
HNRNPU-211ENST00000489705 FLNCQ14315 2725 aa0.59□□□□□ -2.32
HNRNPU-211ENST00000489705 POLQO75417 2590 aa0.59□□□□□ -2.32
HNRNPU-211ENST00000489705 ATRQ13535 2644 aa0.59□□□□□ -2.32
HNRNPU-211ENST00000489705 CFAP47Q6ZTR5 3102 aa0.58□□□□□ -2.32
HNRNPU-211ENST00000489705 BDP1A6H8Y1 2624 aa0.58□□□□□ -2.32
HNRNPU-211ENST00000489705 PDZD2O15018 2839 aa0.58□□□□□ -2.32
HNRNPU-211ENST00000489705 MTORP42345 2549 aa0.58□□□□□ -2.32
HNRNPU-211ENST00000489705 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
HNRNPU-211ENST00000489705 MYO9AB2RTY4 2548 aa0.57□□□□□ -2.32
HNRNPU-211ENST00000489705 NBEAL2Q6ZNJ1 2754 aa0.57□□□□□ -2.32
HNRNPU-211ENST00000489705 RANBP2P49792 3224 aaKnown RBP0.57□□□□□ -2.32
HNRNPU-211ENST00000489705 DMXL1Q9Y485 3027 aa0.57□□□□□ -2.32
HNRNPU-211ENST00000489705 DNAH12Q6ZR08 3092 aa0.57□□□□□ -2.32
HNRNPU-211ENST00000489705 WDFY4Q6ZS81 3184 aa0.57□□□□□ -2.32
HNRNPU-211ENST00000489705 FRYQ5TBA9 3013 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 209.3 ms