RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 KRTAP4-5Q9BYR2 181 aa15.23■□□□□ 0.03
HOXB3-210ENST00000489475 BIRC6Q9NR09 4857 aa15.19■□□□□ 0.02
HOXB3-210ENST00000489475 WFDC13Q8IUB5 93 aa15.19■□□□□ 0.02
HOXB3-210ENST00000489475 CASC2Q6XLA1 102 aa15.16■□□□□ 0.02
HOXB3-210ENST00000489475 C8orf17Q9NRJ1 99 aa15.16■□□□□ 0.02
HOXB3-210ENST00000489475 FAT3Q8TDW7 4589 aa15.16■□□□□ 0.02
HOXB3-210ENST00000489475 MMP24-AS1A0A0U1RRL7 71 aa15.15■□□□□ 0.02
HOXB3-210ENST00000489475 OXTP01178 125 aa15.15■□□□□ 0.02
HOXB3-210ENST00000489475 TNXBP22105 4242 aa15.14■□□□□ 0.01
HOXB3-210ENST00000489475 MT1HL1P0DM35 61 aa15.13■□□□□ 0.01
HOXB3-210ENST00000489475 CCDC179H3BU77 68 aa15.13■□□□□ 0.01
HOXB3-210ENST00000489475 KRTAP29-1A8MX34 341 aaPredicted RBP15.12■□□□□ 0.01
HOXB3-210ENST00000489475 MYCBP2O75592 4640 aa15.11■□□□□ 0.01
HOXB3-210ENST00000489475 hDV103S1A0JD37 113 aa15.1■□□□□ 0.01
HOXB3-210ENST00000489475 SMIM20Q8N5G0 67 aa15.1■□□□□ 0.01
HOXB3-210ENST00000489475 C8orf87E5RJ46 101 aa15.08■□□□□ 0.01
HOXB3-210ENST00000489475 NOTCH2NLQ7Z3S9 236 aa15.08■□□□□ 0.01
HOXB3-210ENST00000489475 SERP2Q8N6R1 65 aa15.06■□□□□ 0
HOXB3-210ENST00000489475 LINC00313P59037 77 aa15.04■□□□□ -0
HOXB3-210ENST00000489475 RETNLBQ9BQ08 111 aa15.04■□□□□ -0
HOXB3-210ENST00000489475 TRAV7A0A075B6U4 112 aa15.03■□□□□ -0
HOXB3-210ENST00000489475 DMBT1Q9UGM3 2413 aaPredicted RBP15.03■□□□□ -0
HOXB3-210ENST00000489475 OCR1Q9BZK8 76 aa15.01□□□□□ -0.01
HOXB3-210ENST00000489475 HERC2O95714 4834 aa15□□□□□ -0.01
HOXB3-210ENST00000489475 TMEM254Q8TBM7 123 aa15□□□□□ -0.01
HOXB3-210ENST00000489475 MRPL34Q9BQ48 92 aaKnown RBP14.98□□□□□ -0.01
HOXB3-210ENST00000489475 COX7CP15954 63 aa14.96□□□□□ -0.01
HOXB3-210ENST00000489475 UQCRQO14949 82 aa14.94□□□□□ -0.02
HOXB3-210ENST00000489475 NDUFS5O43920 106 aa14.89□□□□□ -0.03
HOXB3-210ENST00000489475 FP248Q71RG6 208 aaPredicted RBP14.87□□□□□ -0.03
HOXB3-210ENST00000489475 ABCA13Q86UQ4 5058 aa14.86□□□□□ -0.03
HOXB3-210ENST00000489475 KRTAP16-1A8MUX0 517 aa14.85□□□□□ -0.03
HOXB3-210ENST00000489475 TP53AIP1Q9HCN2 124 aa14.85□□□□□ -0.03
HOXB3-210ENST00000489475 RPS28P62857 69 aaKnown RBP14.82□□□□□ -0.04
HOXB3-210ENST00000489475 J3QL48 77 aa14.81□□□□□ -0.04
HOXB3-210ENST00000489475 C9orf92A6NGG3 77 aa14.8□□□□□ -0.04
HOXB3-210ENST00000489475 Q8N9P0 234 aaPredicted RBP14.8□□□□□ -0.04
HOXB3-210ENST00000489475 C5orf47Q569G3 176 aa14.78□□□□□ -0.04
HOXB3-210ENST00000489475 C20orf197Q8N268 126 aa14.77□□□□□ -0.05
HOXB3-210ENST00000489475 IGLV7-46A0A075B6I9 117 aa14.76□□□□□ -0.05
HOXB3-210ENST00000489475 TRAV22A0A0B4J277 110 aa14.71□□□□□ -0.06
HOXB3-210ENST00000489475 MP68P56378 58 aa14.71□□□□□ -0.06
HOXB3-210ENST00000489475 H0Y9P7 68 aa14.69□□□□□ -0.06
HOXB3-210ENST00000489475 PRR4Q16378 134 aa14.69□□□□□ -0.06
HOXB3-210ENST00000489475 SNURFQ9Y675 71 aa14.66□□□□□ -0.06
HOXB3-210ENST00000489475 TMEM258P61165 79 aa14.65□□□□□ -0.06
HOXB3-210ENST00000489475 KLKP1Q107X0 134 aa14.65□□□□□ -0.06
HOXB3-210ENST00000489475 A0A0U1RQV1 116 aa14.64□□□□□ -0.07
HOXB3-210ENST00000489475 C20orf166-AS1Q96NR2 134 aa14.62□□□□□ -0.07
HOXB3-210ENST00000489475 H3BPC8 53 aa14.6□□□□□ -0.07
HOXB3-210ENST00000489475 KRTAP13-3Q3SY46 172 aa14.6□□□□□ -0.07
HOXB3-210ENST00000489475 Q5W150 140 aa14.6□□□□□ -0.07
HOXB3-210ENST00000489475 LINC00208Q96KT6 92 aa14.6□□□□□ -0.07
HOXB3-210ENST00000489475 A8MUU9 505 aa14.59□□□□□ -0.07
HOXB3-210ENST00000489475 CYSTM1Q9H1C7 97 aa14.58□□□□□ -0.08
HOXB3-210ENST00000489475 C1orf64Q8NEQ6 169 aa14.55□□□□□ -0.08
HOXB3-210ENST00000489475 ZCCHC13Q8WW36 166 aaKnown RBP14.54□□□□□ -0.08
HOXB3-210ENST00000489475 Q75L30 129 aa14.51□□□□□ -0.09
HOXB3-210ENST00000489475 NDUFC1O43677 76 aa14.49□□□□□ -0.09
HOXB3-210ENST00000489475 TPRXLQ17RH7 258 aa14.49□□□□□ -0.09
HOXB3-210ENST00000489475 XP32Q5T750 250 aa14.46□□□□□ -0.09
HOXB3-210ENST00000489475 LOC101927531A0A1B0GV80 90 aa14.44□□□□□ -0.1
HOXB3-210ENST00000489475 H7BZZ5 65 aa14.44□□□□□ -0.1
HOXB3-210ENST00000489475 PCLOQ9Y6V0 5065 aa14.4□□□□□ -0.1
HOXB3-210ENST00000489475 RPL37P61927 97 aaKnown RBP14.38□□□□□ -0.11
HOXB3-210ENST00000489475 IGKV2-30P06310 120 aa14.34□□□□□ -0.11
HOXB3-210ENST00000489475 ATP11AUNQ6ZP68 121 aa14.34□□□□□ -0.11
HOXB3-210ENST00000489475 CYP4F30PQ9H0H9 118 aa14.34□□□□□ -0.11
HOXB3-210ENST00000489475 IGKV2D-30A0A075B6S6 120 aa14.31□□□□□ -0.12
HOXB3-210ENST00000489475 PCOTHQ58A44 107 aa14.3□□□□□ -0.12
HOXB3-210ENST00000489475 C7orf65Q6ZTY9 151 aa14.24□□□□□ -0.13
HOXB3-210ENST00000489475 FAM236DA0A1B0GTK5 79 aa14.2□□□□□ -0.14
HOXB3-210ENST00000489475 FAM236CP0DP71 79 aa14.2□□□□□ -0.14
HOXB3-210ENST00000489475 SERP1Q9Y6X1 66 aa14.2□□□□□ -0.14
HOXB3-210ENST00000489475 SPANXA2-OT1Q8N9U9 137 aa14.16□□□□□ -0.14
HOXB3-210ENST00000489475 LPAP08519 4548 aa14.16□□□□□ -0.14
HOXB3-210ENST00000489475 ATP5EP56381 51 aaPredicted RBP14.15□□□□□ -0.14
HOXB3-210ENST00000489475 SPINK7P58062 85 aa14.14□□□□□ -0.15
HOXB3-210ENST00000489475 HRES1P13985 223 aa14.1□□□□□ -0.15
HOXB3-210ENST00000489475 LRP2P98164 4655 aa14.08□□□□□ -0.15
HOXB3-210ENST00000489475 HERC1Q15751 4861 aa14.07□□□□□ -0.16
HOXB3-210ENST00000489475 C4orf26Q17RF5 130 aa14.06□□□□□ -0.16
HOXB3-210ENST00000489475 SMIM26A0A096LP01 95 aa14.03□□□□□ -0.16
HOXB3-210ENST00000489475 SEC61BP60468 96 aaKnown RBP14.01□□□□□ -0.17
HOXB3-210ENST00000489475 PRO0628Q9UI54 55 aa14□□□□□ -0.17
HOXB3-210ENST00000489475 DMAC1Q96GE9 116 aa13.87□□□□□ -0.19
HOXB3-210ENST00000489475 HMCN2Q8NDA2 5059 aa13.87□□□□□ -0.19
HOXB3-210ENST00000489475 ACYP2P14621 99 aa13.81□□□□□ -0.2
HOXB3-210ENST00000489475 A8MUN3 132 aa13.77□□□□□ -0.21
HOXB3-210ENST00000489475 COX6B2Q6YFQ2 88 aa13.76□□□□□ -0.21
HOXB3-210ENST00000489475 COA5Q86WW8 74 aa13.74□□□□□ -0.21
HOXB3-210ENST00000489475 KRTAP3-1Q9BYR8 98 aa13.69□□□□□ -0.22
HOXB3-210ENST00000489475 KRTAP4-1Q9BYQ7 146 aa13.64□□□□□ -0.23
HOXB3-210ENST00000489475 MPLKIPQ8TAP9 179 aa13.64□□□□□ -0.23
HOXB3-210ENST00000489475 RBM12B-AS1Q9P1G2 102 aa13.63□□□□□ -0.23
HOXB3-210ENST00000489475 MUC17Q685J3 4493 aa13.63□□□□□ -0.23
HOXB3-210ENST00000489475 CHKB-CPT1BH3BT56 60 aa13.61□□□□□ -0.23
HOXB3-210ENST00000489475 BRK1Q8WUW1 75 aa13.48□□□□□ -0.25
HOXB3-210ENST00000489475 H1FX-AS1Q4G0G2 97 aa13.46□□□□□ -0.26
HOXB3-210ENST00000489475 Q1T7F1 81 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms