RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 KRTAP13-3Q3SY46 172 aa4.23□□□□□ -1.73
EXOSC3-206ENST00000489414 Q6ZRX8 168 aa4.23□□□□□ -1.73
EXOSC3-206ENST00000489414 UBL5Q9BZL1 73 aa4.23□□□□□ -1.73
EXOSC3-206ENST00000489414 A0A096LNI7 61 aa4.22□□□□□ -1.73
EXOSC3-206ENST00000489414 TRBV7-7A0A0K0K1E9 115 aa4.22□□□□□ -1.73
EXOSC3-206ENST00000489414 UBE2BP63146 152 aa4.22□□□□□ -1.73
EXOSC3-206ENST00000489414 B5MCH6 92 aa4.21□□□□□ -1.74
EXOSC3-206ENST00000489414 SPRR1AP35321 89 aa4.21□□□□□ -1.74
EXOSC3-206ENST00000489414 ATP5EP2Q5VTU8 51 aa4.21□□□□□ -1.74
EXOSC3-206ENST00000489414 C1orf137Q5JT78 98 aa4.2□□□□□ -1.74
EXOSC3-206ENST00000489414 Q6JHZ5 121 aa4.2□□□□□ -1.74
EXOSC3-206ENST00000489414 Q6ZQT0 140 aa4.2□□□□□ -1.74
EXOSC3-206ENST00000489414 DEFB105AQ8NG35 78 aa4.2□□□□□ -1.74
EXOSC3-206ENST00000489414 SMCR5Q8TEV8 140 aa4.2□□□□□ -1.74
EXOSC3-206ENST00000489414 ANAPC13Q9BS18 74 aa4.2□□□□□ -1.74
EXOSC3-206ENST00000489414 F8WEM9 126 aa4.19□□□□□ -1.74
EXOSC3-206ENST00000489414 IGLV7-43P04211 117 aa4.19□□□□□ -1.74
EXOSC3-206ENST00000489414 FAM19A1Q7Z5A9 133 aa4.19□□□□□ -1.74
EXOSC3-206ENST00000489414 TRBV7-4A0A0J9YYF1 115 aa4.18□□□□□ -1.74
EXOSC3-206ENST00000489414 A0A1W2PNN7 141 aa4.17□□□□□ -1.74
EXOSC3-206ENST00000489414 UBE2AP49459 152 aa4.17□□□□□ -1.74
EXOSC3-206ENST00000489414 KRTAP7-1Q8IUC3 87 aa4.17□□□□□ -1.74
EXOSC3-206ENST00000489414 Q9BRP9 147 aa4.17□□□□□ -1.74
EXOSC3-206ENST00000489414 IGLV5-48A0A075B6I7 105 aa4.16□□□□□ -1.74
EXOSC3-206ENST00000489414 IGKV3D-7A0A0C4DH55 119 aa4.16□□□□□ -1.74
EXOSC3-206ENST00000489414 A0A1B0GW54 56 aa4.16□□□□□ -1.74
EXOSC3-206ENST00000489414 Q8N377 158 aa4.16□□□□□ -1.74
EXOSC3-206ENST00000489414 FAM236AA0A1B0GUQ0 79 aa4.15□□□□□ -1.75
EXOSC3-206ENST00000489414 FAM236BA0A1B0GV22 79 aa4.15□□□□□ -1.75
EXOSC3-206ENST00000489414 HIST1H4AP62805 103 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-206ENST00000489414 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
EXOSC3-206ENST00000489414 PHF5AQ7RTV0 110 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-206ENST00000489414 HIGD2AQ9BW72 106 aa4.15□□□□□ -1.75
EXOSC3-206ENST00000489414 ATOX1O00244 68 aa4.14□□□□□ -1.75
EXOSC3-206ENST00000489414 PRLHP81277 87 aa4.14□□□□□ -1.75
EXOSC3-206ENST00000489414 Q6ZVQ6 151 aa4.14□□□□□ -1.75
EXOSC3-206ENST00000489414 A0A087X002 238 aa4.13□□□□□ -1.75
EXOSC3-206ENST00000489414 BCE1O60756 84 aa4.13□□□□□ -1.75
EXOSC3-206ENST00000489414 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
EXOSC3-206ENST00000489414 CXCL6P80162 114 aa4.13□□□□□ -1.75
EXOSC3-206ENST00000489414 NREPQ16612 68 aa4.13□□□□□ -1.75
EXOSC3-206ENST00000489414 ST20-AS1Q8NBB2 130 aa4.13□□□□□ -1.75
EXOSC3-206ENST00000489414 MT2AP02795 61 aa4.12□□□□□ -1.75
EXOSC3-206ENST00000489414 FP248Q71RG6 208 aaPredicted RBP4.12□□□□□ -1.75
EXOSC3-206ENST00000489414 C3orf22Q8N5N4 141 aa4.11□□□□□ -1.75
EXOSC3-206ENST00000489414 TYMSOSQ8TAI1 123 aa4.11□□□□□ -1.75
EXOSC3-206ENST00000489414 ZNF706Q9Y5V0 76 aaPredicted RBP4.11□□□□□ -1.75
EXOSC3-206ENST00000489414 IGLV8-61A0A075B6I0 122 aa4.1□□□□□ -1.75
EXOSC3-206ENST00000489414 MT1FP04733 61 aa4.1□□□□□ -1.75
EXOSC3-206ENST00000489414 Q8NBF4 154 aa4.1□□□□□ -1.75
EXOSC3-206ENST00000489414 BPY2O14599 106 aa4.09□□□□□ -1.75
EXOSC3-206ENST00000489414 SPRR1BP22528 89 aa4.09□□□□□ -1.75
EXOSC3-206ENST00000489414 A0A087WVE0 104 aa4.08□□□□□ -1.76
EXOSC3-206ENST00000489414 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
EXOSC3-206ENST00000489414 LINC00304Q8N9R0 145 aa4.08□□□□□ -1.76
EXOSC3-206ENST00000489414 SPRR4Q96PI1 79 aa4.08□□□□□ -1.76
EXOSC3-206ENST00000489414 A0A1W2PNM2 257 aa4.07□□□□□ -1.76
EXOSC3-206ENST00000489414 UQCRQO14949 82 aa4.07□□□□□ -1.76
EXOSC3-206ENST00000489414 SMIM29Q86T20 159 aa4.07□□□□□ -1.76
EXOSC3-206ENST00000489414 KRTAP11-1Q8IUC1 163 aa4.07□□□□□ -1.76
EXOSC3-206ENST00000489414 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
EXOSC3-206ENST00000489414 COX7CP15954 63 aa4.06□□□□□ -1.76
EXOSC3-206ENST00000489414 C9orf153Q5TBE3 101 aa4.06□□□□□ -1.76
EXOSC3-206ENST00000489414 IGFL1Q6UW32 110 aa4.06□□□□□ -1.76
EXOSC3-206ENST00000489414 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
EXOSC3-206ENST00000489414 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
EXOSC3-206ENST00000489414 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
EXOSC3-206ENST00000489414 PCOTHQ58A44 107 aa4.05□□□□□ -1.76
EXOSC3-206ENST00000489414 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
EXOSC3-206ENST00000489414 ZNF861PO60384 105 aa4.04□□□□□ -1.76
EXOSC3-206ENST00000489414 TRAV7A0A075B6U4 112 aa4.03□□□□□ -1.76
EXOSC3-206ENST00000489414 A0A087WSZ3 146 aa4.02□□□□□ -1.77
EXOSC3-206ENST00000489414 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
EXOSC3-206ENST00000489414 IGKV4-1P06312 121 aa4.02□□□□□ -1.77
EXOSC3-206ENST00000489414 KRTAP13-2Q52LG2 175 aa4.02□□□□□ -1.77
EXOSC3-206ENST00000489414 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
EXOSC3-206ENST00000489414 SPRR2EP22531 72 aa4.01□□□□□ -1.77
EXOSC3-206ENST00000489414 SPRR2BP35325 72 aa4.01□□□□□ -1.77
EXOSC3-206ENST00000489414 SPRR2AP35326 72 aa4.01□□□□□ -1.77
EXOSC3-206ENST00000489414 SS18L2Q9UHA2 77 aa4.01□□□□□ -1.77
EXOSC3-206ENST00000489414 J3KT08 172 aa4□□□□□ -1.77
EXOSC3-206ENST00000489414 Q8N9L7 120 aa4□□□□□ -1.77
EXOSC3-206ENST00000489414 A0A0G2JQZ4 141 aa3.99□□□□□ -1.77
EXOSC3-206ENST00000489414 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
EXOSC3-206ENST00000489414 MOBPQ13875 183 aa3.99□□□□□ -1.77
EXOSC3-206ENST00000489414 NDUFB1O75438 58 aa3.98□□□□□ -1.77
EXOSC3-206ENST00000489414 HCG22E2RYF7 251 aa3.97□□□□□ -1.77
EXOSC3-206ENST00000489414 DSCR10P59022 87 aa3.97□□□□□ -1.77
EXOSC3-206ENST00000489414 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-206ENST00000489414 K7EQZ3 153 aa3.96□□□□□ -1.78
EXOSC3-206ENST00000489414 C20orf197Q8N268 126 aa3.96□□□□□ -1.78
EXOSC3-206ENST00000489414 A8MWP4 228 aa3.95□□□□□ -1.78
EXOSC3-206ENST00000489414 NDUFC1O43677 76 aa3.95□□□□□ -1.78
EXOSC3-206ENST00000489414 TMEM258P61165 79 aa3.95□□□□□ -1.78
EXOSC3-206ENST00000489414 DEFB116Q30KQ4 102 aa3.95□□□□□ -1.78
EXOSC3-206ENST00000489414 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
EXOSC3-206ENST00000489414 HRCT1Q6UXD1 115 aa3.95□□□□□ -1.78
EXOSC3-206ENST00000489414 SSBP3-AS1Q7Z2R9 100 aa3.95□□□□□ -1.78
EXOSC3-206ENST00000489414 CD164Q04900 197 aa3.94□□□□□ -1.78
EXOSC3-206ENST00000489414 FAM229BQ4G0N7 80 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 299 ms