RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CYB5AP00167 134 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 Q0VG73 95 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 PMCHL1Q16048 86 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 CGREF1Q99674 301 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 MON2Q7Z3U7 1717 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 LRRIQ1Q96JM4 1722 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 CLASP1Q7Z460 1538 aa-1.47□□□□□ -2.64
CCDC93-209ENST00000488908 GOLGB1Q14789 3259 aaKnown RBP-1.47□□□□□ -2.65
CCDC93-209ENST00000488908 NWD1Q149M9 1564 aa-1.47□□□□□ -2.65
CCDC93-209ENST00000488908 PREX2Q70Z35 1606 aa-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 ZC3H13Q5T200 1668 aaKnown RBP-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 ITSN2Q9NZM3 1697 aa-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 SPHKAPQ2M3C7 1700 aa-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 A0A1B0GUT8 65 aa-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 DPY30Q9C005 99 aa-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 NRXN3Q9Y4C0 1643 aa-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 SHPRHQ149N8 1683 aa-1.48□□□□□ -2.65
CCDC93-209ENST00000488908 DEFB131BA0A096LNP1 70 aa-1.49□□□□□ -2.65
CCDC93-209ENST00000488908 OOSP1A8MZH6 123 aa-1.49□□□□□ -2.65
CCDC93-209ENST00000488908 IFI27P40305 119 aaPredicted RBP-1.49□□□□□ -2.65
CCDC93-209ENST00000488908 ATP5EP56381 51 aaPredicted RBP-1.49□□□□□ -2.65
CCDC93-209ENST00000488908 HMGN3Q15651 99 aa-1.49□□□□□ -2.65
CCDC93-209ENST00000488908 RPL13AP3Q6NVV1 102 aa-1.49□□□□□ -2.65
CCDC93-209ENST00000488908 LINC00470Q9BZP3 86 aa-1.49□□□□□ -2.65
CCDC93-209ENST00000488908 NEXMIFQ5QGS0 1516 aa-1.5□□□□□ -2.65
CCDC93-209ENST00000488908 TRBV25-1A0A075B6N4 114 aa-1.5□□□□□ -2.65
CCDC93-209ENST00000488908 NDUFB1O75438 58 aa-1.5□□□□□ -2.65
CCDC93-209ENST00000488908 DEFB133Q30KQ1 61 aa-1.5□□□□□ -2.65
CCDC93-209ENST00000488908 DOT1LQ8TEK3 1739 aa-1.5□□□□□ -2.65
CCDC93-209ENST00000488908 KTN1Q86UP2 1357 aaKnown RBP-1.5□□□□□ -2.65
CCDC93-209ENST00000488908 ABCC2Q92887 1545 aa-1.5□□□□□ -2.65
CCDC93-209ENST00000488908 PPLO60437 1756 aa-1.51□□□□□ -2.65
CCDC93-209ENST00000488908 UQCRHP07919 91 aa-1.51□□□□□ -2.65
CCDC93-209ENST00000488908 POLR2KP53803 58 aaKnown RBP-1.51□□□□□ -2.65
CCDC93-209ENST00000488908 KRTDAPP60985 99 aa-1.51□□□□□ -2.65
CCDC93-209ENST00000488908 NCBP2-AS2Q69YL0 99 aa-1.51□□□□□ -2.65
CCDC93-209ENST00000488908 KAAG1Q9UBP8 84 aa-1.51□□□□□ -2.65
CCDC93-209ENST00000488908 TOP2BQ02880 1626 aa-1.51□□□□□ -2.65
CCDC93-209ENST00000488908 KIF14Q15058 1648 aa-1.51□□□□□ -2.65
CCDC93-209ENST00000488908 FAM24AA6NFZ4 105 aa-1.52□□□□□ -2.65
CCDC93-209ENST00000488908 ATOX1O00244 68 aa-1.52□□□□□ -2.65
CCDC93-209ENST00000488908 SARNPP82979 210 aaKnown RBP-1.52□□□□□ -2.65
CCDC93-209ENST00000488908 PLGLAQ15195 96 aa-1.52□□□□□ -2.65
CCDC93-209ENST00000488908 ZNF720Q7Z2F6 126 aa-1.52□□□□□ -2.65
CCDC93-209ENST00000488908 NDUFA4O00483 81 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 CHD1O14646 1710 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 GNG7O60262 68 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 ROCK2O75116 1388 aaKnown RBP-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 LINC00032P0C843 101 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 ETDBQ3ZM63 59 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 DDX60LQ5H9U9 1706 aaKnown RBP-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 FOCADQ5VW36 1801 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 CACFD1Q9UGQ2 172 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 MYH4Q9Y623 1939 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 MAP3K4Q9Y6R4 1608 aa-1.53□□□□□ -2.65
CCDC93-209ENST00000488908 ANKRD26Q9UPS8 1709 aa-1.54□□□□□ -2.66
CCDC93-209ENST00000488908 RRBP1Q9P2E9 1410 aaKnown RBP-1.54□□□□□ -2.66
CCDC93-209ENST00000488908 SMIM27A0A1W2PRY6 76 aa-1.54□□□□□ -2.66
CCDC93-209ENST00000488908 DEFB104AQ8WTQ1 72 aa-1.54□□□□□ -2.66
CCDC93-209ENST00000488908 UBL5Q9BZL1 73 aa-1.54□□□□□ -2.66
CCDC93-209ENST00000488908 ITSN1Q15811 1721 aa-1.54□□□□□ -2.66
CCDC93-209ENST00000488908 MPC2O95563 127 aa-1.55□□□□□ -2.66
CCDC93-209ENST00000488908 AKAIN1P0CW23 69 aa-1.55□□□□□ -2.66
CCDC93-209ENST00000488908 RBP2P50120 134 aa-1.55□□□□□ -2.66
CCDC93-209ENST00000488908 CRIP1P50238 77 aa-1.55□□□□□ -2.66
CCDC93-209ENST00000488908 ABCA3Q99758 1704 aa-1.55□□□□□ -2.66
CCDC93-209ENST00000488908 HFM1A2PYH4 1435 aa-1.56□□□□□ -2.66
CCDC93-209ENST00000488908 RICTORQ6R327 1708 aa-1.56□□□□□ -2.66
CCDC93-209ENST00000488908 UMAD1C9J7I0 102 aa-1.56□□□□□ -2.66
CCDC93-209ENST00000488908 HTN1P15515 57 aa-1.56□□□□□ -2.66
CCDC93-209ENST00000488908 S100A1P23297 94 aa-1.56□□□□□ -2.66
CCDC93-209ENST00000488908 PEA15Q15121 130 aa-1.56□□□□□ -2.66
CCDC93-209ENST00000488908 LMO7Q8WWI1 1683 aa-1.56□□□□□ -2.66
CCDC93-209ENST00000488908 RAPGEF2Q9Y4G8 1499 aa-1.56□□□□□ -2.66
CCDC93-209ENST00000488908 VPS8Q8N3P4 1428 aa-1.57□□□□□ -2.66
CCDC93-209ENST00000488908 NRAPQ86VF7 1730 aa-1.57□□□□□ -2.66
CCDC93-209ENST00000488908 RHPN1-AS1Q9BWJ2 59 aa-1.57□□□□□ -2.66
CCDC93-209ENST00000488908 H3BQ15 152 aa-1.58□□□□□ -2.66
CCDC93-209ENST00000488908 WFDC10BQ8IUB3 73 aa-1.58□□□□□ -2.66
CCDC93-209ENST00000488908 PMCHL2Q9BQD1 86 aa-1.58□□□□□ -2.66
CCDC93-209ENST00000488908 RABAC1Q9UI14 185 aa-1.58□□□□□ -2.66
CCDC93-209ENST00000488908 LTN1O94822 1766 aa-1.58□□□□□ -2.66
CCDC93-209ENST00000488908 TJP1Q07157 1748 aa-1.58□□□□□ -2.66
CCDC93-209ENST00000488908 FAM208AQ9UK61 1670 aaKnown RBP-1.58□□□□□ -2.66
CCDC93-209ENST00000488908 SMIM11AP58511 58 aa-1.59□□□□□ -2.66
CCDC93-209ENST00000488908 NMES1Q9C002 83 aa-1.59□□□□□ -2.66
CCDC93-209ENST00000488908 KCNQ1DNQ9H478 68 aa-1.59□□□□□ -2.66
CCDC93-209ENST00000488908 CCDC88BA6NC98 1476 aa-1.59□□□□□ -2.66
CCDC93-209ENST00000488908 FANCAO15360 1455 aa-1.59□□□□□ -2.66
CCDC93-209ENST00000488908 NRXN1Q9ULB1 1477 aa-1.59□□□□□ -2.66
CCDC93-209ENST00000488908 DIP2BQ9P265 1576 aa-1.59□□□□□ -2.66
CCDC93-209ENST00000488908 RGPD1P0DJD0 1748 aa-1.6□□□□□ -2.67
CCDC93-209ENST00000488908 UQCRHLA0A096LP55 91 aa-1.6□□□□□ -2.67
CCDC93-209ENST00000488908 ETDCA0A1B0GVM5 59 aa-1.6□□□□□ -2.67
CCDC93-209ENST00000488908 hADV29S1A0JD25 119 aa-1.6□□□□□ -2.67
CCDC93-209ENST00000488908 C2orf88Q9BSF0 95 aa-1.6□□□□□ -2.67
CCDC93-209ENST00000488908 INO80Q9ULG1 1556 aaPredicted RBP-1.6□□□□□ -2.67
CCDC93-209ENST00000488908 C3P01024 1663 aa-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms