RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 VPS13BQ7Z7G8 4022 aa11.11□□□□□ -0.63
COL16A1-215ENST00000488897 LINC00208Q96KT6 92 aa11.1□□□□□ -0.63
COL16A1-215ENST00000488897 KRTAP13-1Q8IUC0 172 aa11.1□□□□□ -0.63
COL16A1-215ENST00000488897 H0Y9P7 68 aa11.07□□□□□ -0.64
COL16A1-215ENST00000488897 Q1T7F1 81 aa11.07□□□□□ -0.64
COL16A1-215ENST00000488897 PRR4Q16378 134 aa11.06□□□□□ -0.64
COL16A1-215ENST00000488897 BRK1Q8WUW1 75 aa11.06□□□□□ -0.64
COL16A1-215ENST00000488897 SPANXA2-OT1Q8N9U9 137 aa11.04□□□□□ -0.64
COL16A1-215ENST00000488897 PLAC8Q9NZF1 115 aa11.01□□□□□ -0.65
COL16A1-215ENST00000488897 MMP24-AS1A0A0U1RRL7 71 aa11□□□□□ -0.65
COL16A1-215ENST00000488897 SEC61GP60059 68 aa11□□□□□ -0.65
COL16A1-215ENST00000488897 IGLV9-49A0A0B4J1Y8 123 aa10.98□□□□□ -0.65
COL16A1-215ENST00000488897 LINC00483Q53H64 154 aa10.97□□□□□ -0.65
COL16A1-215ENST00000488897 KRTAP4-5Q9BYR2 181 aa10.97□□□□□ -0.65
COL16A1-215ENST00000488897 Q96NJ1 140 aa10.95□□□□□ -0.66
COL16A1-215ENST00000488897 ZNF706Q9Y5V0 76 aaPredicted RBP10.95□□□□□ -0.66
COL16A1-215ENST00000488897 V9GYY9 64 aa10.95□□□□□ -0.66
COL16A1-215ENST00000488897 CDK2AP2O75956 126 aa10.93□□□□□ -0.66
COL16A1-215ENST00000488897 MOBPQ13875 183 aa10.93□□□□□ -0.66
COL16A1-215ENST00000488897 TP53AIP1Q9HCN2 124 aa10.93□□□□□ -0.66
COL16A1-215ENST00000488897 PSORS1C2Q9UIG4 136 aa10.92□□□□□ -0.66
COL16A1-215ENST00000488897 ASB16-AS1Q495Z4 193 aa10.92□□□□□ -0.66
COL16A1-215ENST00000488897 HERC2O95714 4834 aa10.91□□□□□ -0.66
COL16A1-215ENST00000488897 ABCA13Q86UQ4 5058 aa10.9□□□□□ -0.66
COL16A1-215ENST00000488897 C8orf17Q9NRJ1 99 aa10.88□□□□□ -0.67
COL16A1-215ENST00000488897 PSPHP1O15172 72 aa10.87□□□□□ -0.67
COL16A1-215ENST00000488897 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
COL16A1-215ENST00000488897 Q5VSD8 79 aa10.87□□□□□ -0.67
COL16A1-215ENST00000488897 FLG2Q5D862 2391 aaPredicted RBP10.86□□□□□ -0.67
COL16A1-215ENST00000488897 IGLV7-46A0A075B6I9 117 aa10.85□□□□□ -0.67
COL16A1-215ENST00000488897 LRP1Q07954 4544 aaKnown RBP10.84□□□□□ -0.67
COL16A1-215ENST00000488897 A0A1B0GVX0 72 aa10.84□□□□□ -0.67
COL16A1-215ENST00000488897 ZNF861PO60384 105 aa10.84□□□□□ -0.67
COL16A1-215ENST00000488897 KRTAP10-4P60372 401 aaPredicted RBP10.83□□□□□ -0.68
COL16A1-215ENST00000488897 IGHV6-1A0A0B4J1U7 121 aa10.82□□□□□ -0.68
COL16A1-215ENST00000488897 C1orf195Q5TG92 126 aa10.81□□□□□ -0.68
COL16A1-215ENST00000488897 PCLOQ9Y6V0 5065 aa10.81□□□□□ -0.68
COL16A1-215ENST00000488897 A8MUN3 132 aa10.8□□□□□ -0.68
COL16A1-215ENST00000488897 LIMD2Q9BT23 127 aa10.8□□□□□ -0.68
COL16A1-215ENST00000488897 Q8N1X5 172 aa10.79□□□□□ -0.68
COL16A1-215ENST00000488897 Q8N9P0 234 aaPredicted RBP10.79□□□□□ -0.68
COL16A1-215ENST00000488897 FAM229AH3BQW9 127 aa10.79□□□□□ -0.68
COL16A1-215ENST00000488897 NDUFS5O43920 106 aa10.78□□□□□ -0.68
COL16A1-215ENST00000488897 MRPL34Q9BQ48 92 aaKnown RBP10.78□□□□□ -0.68
COL16A1-215ENST00000488897 COA5Q86WW8 74 aa10.77□□□□□ -0.69
COL16A1-215ENST00000488897 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
COL16A1-215ENST00000488897 ANAPC11Q9NYG5 84 aa10.76□□□□□ -0.69
COL16A1-215ENST00000488897 Q5VV11 94 aa10.75□□□□□ -0.69
COL16A1-215ENST00000488897 CD164Q04900 197 aa10.74□□□□□ -0.69
COL16A1-215ENST00000488897 IGLV7-43P04211 117 aa10.73□□□□□ -0.69
COL16A1-215ENST00000488897 PLA2G1BP04054 148 aaKnown RBP10.68□□□□□ -0.7
COL16A1-215ENST00000488897 A0A087X002 238 aa10.68□□□□□ -0.7
COL16A1-215ENST00000488897 NOTCH2NLQ7Z3S9 236 aa10.68□□□□□ -0.7
COL16A1-215ENST00000488897 PRR15LQ9BU68 103 aa10.68□□□□□ -0.7
COL16A1-215ENST00000488897 PKHD1L1Q86WI1 4243 aa10.67□□□□□ -0.7
COL16A1-215ENST00000488897 CHKB-CPT1BH3BT56 60 aa10.66□□□□□ -0.7
COL16A1-215ENST00000488897 LOC101927531A0A1B0GV80 90 aa10.64□□□□□ -0.71
COL16A1-215ENST00000488897 SPINK6Q6UWN8 80 aa10.64□□□□□ -0.71
COL16A1-215ENST00000488897 SSBP3-AS1Q7Z2R9 100 aa10.63□□□□□ -0.71
COL16A1-215ENST00000488897 Q75L30 129 aa10.61□□□□□ -0.71
COL16A1-215ENST00000488897 FAT3Q8TDW7 4589 aa10.61□□□□□ -0.71
COL16A1-215ENST00000488897 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
COL16A1-215ENST00000488897 HRES1P13985 223 aa10.57□□□□□ -0.72
COL16A1-215ENST00000488897 LINC01558Q9Y6Z2 57 aa10.57□□□□□ -0.72
COL16A1-215ENST00000488897 KRTAP13-3Q3SY46 172 aa10.55□□□□□ -0.72
COL16A1-215ENST00000488897 Q5W150 140 aa10.55□□□□□ -0.72
COL16A1-215ENST00000488897 KRTAP1-4P0C5Y4 121 aa10.54□□□□□ -0.72
COL16A1-215ENST00000488897 SPAG11AQ6PDA7 123 aa10.54□□□□□ -0.72
COL16A1-215ENST00000488897 PMAIP1Q13794 54 aa10.53□□□□□ -0.72
COL16A1-215ENST00000488897 A6NED7 52 aa10.52□□□□□ -0.73
COL16A1-215ENST00000488897 PRR26Q8N8Z3 221 aa10.52□□□□□ -0.73
COL16A1-215ENST00000488897 A8MU10 97 aa10.52□□□□□ -0.73
COL16A1-215ENST00000488897 TNXBP22105 4242 aa10.5□□□□□ -0.73
COL16A1-215ENST00000488897 LINC00313P59037 77 aa10.47□□□□□ -0.73
COL16A1-215ENST00000488897 LCA10Q71F78 164 aa10.47□□□□□ -0.73
COL16A1-215ENST00000488897 HERC1Q15751 4861 aa10.46□□□□□ -0.74
COL16A1-215ENST00000488897 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
COL16A1-215ENST00000488897 ACYP2P14621 99 aa10.44□□□□□ -0.74
COL16A1-215ENST00000488897 KRTAP13-2Q52LG2 175 aa10.44□□□□□ -0.74
COL16A1-215ENST00000488897 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
COL16A1-215ENST00000488897 CDC42SE1Q9NRR8 79 aa10.43□□□□□ -0.74
COL16A1-215ENST00000488897 SPTSSBQ8NFR3 76 aa10.4□□□□□ -0.74
COL16A1-215ENST00000488897 MT1HL1P0DM35 61 aa10.38□□□□□ -0.75
COL16A1-215ENST00000488897 DMAC1Q96GE9 116 aa10.37□□□□□ -0.75
COL16A1-215ENST00000488897 IGKV2-30P06310 120 aa10.34□□□□□ -0.75
COL16A1-215ENST00000488897 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
COL16A1-215ENST00000488897 SPINK7P58062 85 aa10.32□□□□□ -0.76
COL16A1-215ENST00000488897 J3QL48 77 aa10.31□□□□□ -0.76
COL16A1-215ENST00000488897 KRTAP10-8P60410 259 aa10.31□□□□□ -0.76
COL16A1-215ENST00000488897 RETNLBQ9BQ08 111 aa10.31□□□□□ -0.76
COL16A1-215ENST00000488897 KRTAP16-1A8MUX0 517 aa10.3□□□□□ -0.76
COL16A1-215ENST00000488897 KTN1-AS1Q86SY8 53 aa10.26□□□□□ -0.77
COL16A1-215ENST00000488897 A6NN06 94 aa10.26□□□□□ -0.77
COL16A1-215ENST00000488897 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
COL16A1-215ENST00000488897 SPINK1P00995 79 aa10.18□□□□□ -0.78
COL16A1-215ENST00000488897 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
COL16A1-215ENST00000488897 IGKV2D-30A0A075B6S6 120 aa10.17□□□□□ -0.78
COL16A1-215ENST00000488897 A0A1B0GU69 56 aa10.16□□□□□ -0.78
COL16A1-215ENST00000488897 LPAP08519 4548 aa10.15□□□□□ -0.78
COL16A1-215ENST00000488897 C7orf65Q6ZTY9 151 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms