RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SPINK1P00995 79 aa4.1□□□□□ -1.75
UBR4-214ENST00000486515 COX7CP15954 63 aa4.1□□□□□ -1.75
UBR4-214ENST00000486515 IGFL1Q6UW32 110 aa4.1□□□□□ -1.75
UBR4-214ENST00000486515 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
UBR4-214ENST00000486515 LOC110117498A0A087WWA1 95 aa4.08□□□□□ -1.76
UBR4-214ENST00000486515 TRBV7-4A0A0J9YYF1 115 aa4.08□□□□□ -1.76
UBR4-214ENST00000486515 A0A1B0GW54 56 aa4.08□□□□□ -1.76
UBR4-214ENST00000486515 ACYP1P07311 99 aa4.08□□□□□ -1.76
UBR4-214ENST00000486515 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
UBR4-214ENST00000486515 OBSCN-AS1Q96MR7 158 aa4.07□□□□□ -1.76
UBR4-214ENST00000486515 FAM236DA0A1B0GTK5 79 aa4.06□□□□□ -1.76
UBR4-214ENST00000486515 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
UBR4-214ENST00000486515 FAM236CP0DP71 79 aa4.06□□□□□ -1.76
UBR4-214ENST00000486515 KRTAP10-8P60410 259 aa4.06□□□□□ -1.76
UBR4-214ENST00000486515 Q6ZQT0 140 aa4.06□□□□□ -1.76
UBR4-214ENST00000486515 A0A087WSZ3 146 aa4.05□□□□□ -1.76
UBR4-214ENST00000486515 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
UBR4-214ENST00000486515 FAM236AA0A1B0GUQ0 79 aa4.05□□□□□ -1.76
UBR4-214ENST00000486515 FAM236BA0A1B0GV22 79 aa4.05□□□□□ -1.76
UBR4-214ENST00000486515 RPS29P62273 56 aaKnown RBP4.05□□□□□ -1.76
UBR4-214ENST00000486515 NREPQ16612 68 aa4.05□□□□□ -1.76
UBR4-214ENST00000486515 UBL5Q9BZL1 73 aa4.05□□□□□ -1.76
UBR4-214ENST00000486515 TNXBP22105 4242 aa4.04□□□□□ -1.76
UBR4-214ENST00000486515 A0A0G2JQZ4 141 aa4.04□□□□□ -1.76
UBR4-214ENST00000486515 ATOX1O00244 68 aa4.04□□□□□ -1.76
UBR4-214ENST00000486515 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
UBR4-214ENST00000486515 A0A1W2PNM2 257 aa4.03□□□□□ -1.76
UBR4-214ENST00000486515 HIST1H4AP62805 103 aaKnown RBP4.02□□□□□ -1.77
UBR4-214ENST00000486515 LINC00643Q86TS7 51 aa4.01□□□□□ -1.77
UBR4-214ENST00000486515 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
UBR4-214ENST00000486515 NDUFB1O75438 58 aa4□□□□□ -1.77
UBR4-214ENST00000486515 MT1HL1P0DM35 61 aa4□□□□□ -1.77
UBR4-214ENST00000486515 PRR4Q16378 134 aa4□□□□□ -1.77
UBR4-214ENST00000486515 SERP2Q8N6R1 65 aa4□□□□□ -1.77
UBR4-214ENST00000486515 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
UBR4-214ENST00000486515 BPY2O14599 106 aa3.98□□□□□ -1.77
UBR4-214ENST00000486515 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
UBR4-214ENST00000486515 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
UBR4-214ENST00000486515 FP248Q71RG6 208 aaPredicted RBP3.98□□□□□ -1.77
UBR4-214ENST00000486515 Q6ZVQ6 151 aa3.97□□□□□ -1.77
UBR4-214ENST00000486515 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
UBR4-214ENST00000486515 DEFB116Q30KQ4 102 aa3.96□□□□□ -1.78
UBR4-214ENST00000486515 RETNLBQ9BQ08 111 aa3.96□□□□□ -1.78
UBR4-214ENST00000486515 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
UBR4-214ENST00000486515 ATP5EP2Q5VTU8 51 aa3.94□□□□□ -1.78
UBR4-214ENST00000486515 IGHV6-1A0A0B4J1U7 121 aa3.93□□□□□ -1.78
UBR4-214ENST00000486515 A8MWP4 228 aa3.93□□□□□ -1.78
UBR4-214ENST00000486515 NDUFC1O43677 76 aa3.93□□□□□ -1.78
UBR4-214ENST00000486515 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
UBR4-214ENST00000486515 LINC00472Q9H8W2 130 aa3.93□□□□□ -1.78
UBR4-214ENST00000486515 CXCL6P80162 114 aa3.92□□□□□ -1.78
UBR4-214ENST00000486515 LPAP08519 4548 aa3.92□□□□□ -1.78
UBR4-214ENST00000486515 C8orf87E5RJ46 101 aa3.91□□□□□ -1.78
UBR4-214ENST00000486515 LINC00313P59037 77 aa3.91□□□□□ -1.78
UBR4-214ENST00000486515 IGKV3D-7A0A0C4DH55 119 aa3.9□□□□□ -1.79
UBR4-214ENST00000486515 A0A1B0GVX0 72 aa3.9□□□□□ -1.79
UBR4-214ENST00000486515 NDUFS5O43920 106 aa3.9□□□□□ -1.79
UBR4-214ENST00000486515 Q96NJ1 140 aa3.9□□□□□ -1.79
UBR4-214ENST00000486515 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
UBR4-214ENST00000486515 H3BS24 57 aa3.88□□□□□ -1.79
UBR4-214ENST00000486515 K7EQZ3 153 aa3.88□□□□□ -1.79
UBR4-214ENST00000486515 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
UBR4-214ENST00000486515 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
UBR4-214ENST00000486515 DSCR10P59022 87 aa3.87□□□□□ -1.79
UBR4-214ENST00000486515 KLKP1Q107X0 134 aa3.87□□□□□ -1.79
UBR4-214ENST00000486515 hDV103S1A0JD37 113 aa3.86□□□□□ -1.79
UBR4-214ENST00000486515 HCG22E2RYF7 251 aa3.86□□□□□ -1.79
UBR4-214ENST00000486515 CASC2Q6XLA1 102 aa3.86□□□□□ -1.79
UBR4-214ENST00000486515 Q8N9L7 120 aa3.86□□□□□ -1.79
UBR4-214ENST00000486515 C8orf17Q9NRJ1 99 aa3.86□□□□□ -1.79
UBR4-214ENST00000486515 RBM12B-AS1Q9P1G2 102 aa3.86□□□□□ -1.79
UBR4-214ENST00000486515 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
UBR4-214ENST00000486515 H7BZZ5 65 aa3.84□□□□□ -1.79
UBR4-214ENST00000486515 ATP11AUNQ6ZP68 121 aa3.84□□□□□ -1.79
UBR4-214ENST00000486515 WFDC13Q8IUB5 93 aa3.84□□□□□ -1.79
UBR4-214ENST00000486515 TMEM254Q8TBM7 123 aa3.84□□□□□ -1.79
UBR4-214ENST00000486515 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.79
UBR4-214ENST00000486515 KRTAP13-3Q3SY46 172 aa3.83□□□□□ -1.8
UBR4-214ENST00000486515 MRPL34Q9BQ48 92 aaKnown RBP3.83□□□□□ -1.8
UBR4-214ENST00000486515 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
UBR4-214ENST00000486515 SEC61BP60468 96 aaKnown RBP3.82□□□□□ -1.8
UBR4-214ENST00000486515 Q1T7F1 81 aa3.82□□□□□ -1.8
UBR4-214ENST00000486515 MMP24-AS1A0A0U1RRL7 71 aa3.81□□□□□ -1.8
UBR4-214ENST00000486515 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
UBR4-214ENST00000486515 XP32Q5T750 250 aa3.8□□□□□ -1.8
UBR4-214ENST00000486515 Q75L30 129 aa3.8□□□□□ -1.8
UBR4-214ENST00000486515 TP53AIP1Q9HCN2 124 aa3.8□□□□□ -1.8
UBR4-214ENST00000486515 A0A087WVE0 104 aa3.79□□□□□ -1.8
UBR4-214ENST00000486515 NOTCH2NLQ7Z3S9 236 aa3.79□□□□□ -1.8
UBR4-214ENST00000486515 NEBP20929 6669 aa3.79□□□□□ -1.8
UBR4-214ENST00000486515 RPL37P61927 97 aaKnown RBP3.78□□□□□ -1.8
UBR4-214ENST00000486515 LCA10Q71F78 164 aa3.78□□□□□ -1.8
UBR4-214ENST00000486515 Q8N9P0 234 aaPredicted RBP3.78□□□□□ -1.8
UBR4-214ENST00000486515 C20orf166-AS1Q96NR2 134 aa3.78□□□□□ -1.8
UBR4-214ENST00000486515 A8MUU9 505 aa3.77□□□□□ -1.81
UBR4-214ENST00000486515 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
UBR4-214ENST00000486515 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
UBR4-214ENST00000486515 C20orf197Q8N268 126 aa3.75□□□□□ -1.81
UBR4-214ENST00000486515 ZCCHC13Q8WW36 166 aaKnown RBP3.75□□□□□ -1.81
UBR4-214ENST00000486515 MP68P56378 58 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms