RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 KRTAP10-1P60331 282 aa8.27□□□□□ -1.09
PHF3-204ENST00000481385 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
PHF3-204ENST00000481385 SACSQ9NZJ4 4579 aa8.25□□□□□ -1.09
PHF3-204ENST00000481385 SPINK6Q6UWN8 80 aa8.24□□□□□ -1.09
PHF3-204ENST00000481385 H3BPC8 53 aa8.23□□□□□ -1.09
PHF3-204ENST00000481385 Q6ZSA8 131 aa8.23□□□□□ -1.09
PHF3-204ENST00000481385 LINC00336Q6ZUF6 198 aa8.22□□□□□ -1.09
PHF3-204ENST00000481385 NDUFS5O43920 106 aa8.21□□□□□ -1.1
PHF3-204ENST00000481385 CDK2AP2O75956 126 aa8.21□□□□□ -1.1
PHF3-204ENST00000481385 KRTAP13-2Q52LG2 175 aa8.19□□□□□ -1.1
PHF3-204ENST00000481385 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
PHF3-204ENST00000481385 SPANXA2-OT1Q8N9U9 137 aa8.18□□□□□ -1.1
PHF3-204ENST00000481385 TP53AIP1Q9HCN2 124 aa8.18□□□□□ -1.1
PHF3-204ENST00000481385 PCOTHQ58A44 107 aa8.17□□□□□ -1.1
PHF3-204ENST00000481385 CD164Q04900 197 aa8.16□□□□□ -1.1
PHF3-204ENST00000481385 SSBP3-AS1Q7Z2R9 100 aa8.16□□□□□ -1.1
PHF3-204ENST00000481385 Q5W150 140 aa8.13□□□□□ -1.11
PHF3-204ENST00000481385 KRTAP1-4P0C5Y4 121 aa8.12□□□□□ -1.11
PHF3-204ENST00000481385 Q1T7F1 81 aa8.12□□□□□ -1.11
PHF3-204ENST00000481385 IGLV7-46A0A075B6I9 117 aa8.11□□□□□ -1.11
PHF3-204ENST00000481385 DYNC1H1Q14204 4646 aaKnown RBP8.11□□□□□ -1.11
PHF3-204ENST00000481385 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.11
PHF3-204ENST00000481385 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
PHF3-204ENST00000481385 PSPHP1O15172 72 aa8.07□□□□□ -1.12
PHF3-204ENST00000481385 Q8N9P0 234 aaPredicted RBP8.06□□□□□ -1.12
PHF3-204ENST00000481385 BRK1Q8WUW1 75 aa8.06□□□□□ -1.12
PHF3-204ENST00000481385 FAT1Q14517 4588 aa8.06□□□□□ -1.12
PHF3-204ENST00000481385 COA5Q86WW8 74 aa8.05□□□□□ -1.12
PHF3-204ENST00000481385 PRO0628Q9UI54 55 aa8.05□□□□□ -1.12
PHF3-204ENST00000481385 KRTAP21-3Q3LHN1 58 aa8.03□□□□□ -1.12
PHF3-204ENST00000481385 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
PHF3-204ENST00000481385 C8orf87E5RJ46 101 aa8.02□□□□□ -1.13
PHF3-204ENST00000481385 LINC00313P59037 77 aa8.02□□□□□ -1.13
PHF3-204ENST00000481385 A8MUN3 132 aa8.01□□□□□ -1.13
PHF3-204ENST00000481385 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
PHF3-204ENST00000481385 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
PHF3-204ENST00000481385 LOC101927531A0A1B0GV80 90 aa7.99□□□□□ -1.13
PHF3-204ENST00000481385 KRTAP16-1A8MUX0 517 aa7.98□□□□□ -1.13
PHF3-204ENST00000481385 HRES1P13985 223 aa7.97□□□□□ -1.13
PHF3-204ENST00000481385 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
PHF3-204ENST00000481385 RYR2Q92736 4967 aa7.96□□□□□ -1.13
PHF3-204ENST00000481385 Q5VV11 94 aa7.96□□□□□ -1.14
PHF3-204ENST00000481385 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
PHF3-204ENST00000481385 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
PHF3-204ENST00000481385 LIMD2Q9BT23 127 aa7.93□□□□□ -1.14
PHF3-204ENST00000481385 PKHD1L1Q86WI1 4243 aa7.93□□□□□ -1.14
PHF3-204ENST00000481385 V9GYY9 64 aa7.93□□□□□ -1.14
PHF3-204ENST00000481385 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
PHF3-204ENST00000481385 PRR15LQ9BU68 103 aa7.91□□□□□ -1.14
PHF3-204ENST00000481385 A8MU10 97 aa7.91□□□□□ -1.14
PHF3-204ENST00000481385 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
PHF3-204ENST00000481385 SPAG11AQ6PDA7 123 aa7.89□□□□□ -1.15
PHF3-204ENST00000481385 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
PHF3-204ENST00000481385 A0A1B0GVY2 172 aa7.88□□□□□ -1.15
PHF3-204ENST00000481385 SPINK1P00995 79 aa7.88□□□□□ -1.15
PHF3-204ENST00000481385 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
PHF3-204ENST00000481385 CHKB-CPT1BH3BT56 60 aa7.84□□□□□ -1.15
PHF3-204ENST00000481385 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
PHF3-204ENST00000481385 LINC00304Q8N9R0 145 aa7.84□□□□□ -1.15
PHF3-204ENST00000481385 DMAC1Q96GE9 116 aa7.82□□□□□ -1.16
PHF3-204ENST00000481385 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
PHF3-204ENST00000481385 Q75L30 129 aa7.81□□□□□ -1.16
PHF3-204ENST00000481385 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
PHF3-204ENST00000481385 ACYP2P14621 99 aa7.79□□□□□ -1.16
PHF3-204ENST00000481385 LRP1Q07954 4544 aaKnown RBP7.76□□□□□ -1.17
PHF3-204ENST00000481385 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
PHF3-204ENST00000481385 LCA10Q71F78 164 aa7.75□□□□□ -1.17
PHF3-204ENST00000481385 A6NED7 52 aa7.73□□□□□ -1.17
PHF3-204ENST00000481385 RYR3Q15413 4870 aa7.73□□□□□ -1.17
PHF3-204ENST00000481385 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
PHF3-204ENST00000481385 TNXBP22105 4242 aa7.72□□□□□ -1.17
PHF3-204ENST00000481385 HSPG2P98160 4391 aa7.71□□□□□ -1.17
PHF3-204ENST00000481385 SPINK7P58062 85 aa7.71□□□□□ -1.18
PHF3-204ENST00000481385 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
PHF3-204ENST00000481385 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
PHF3-204ENST00000481385 Q8N1X5 172 aa7.64□□□□□ -1.19
PHF3-204ENST00000481385 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
PHF3-204ENST00000481385 SPTSSBQ8NFR3 76 aa7.63□□□□□ -1.19
PHF3-204ENST00000481385 FLG2Q5D862 2391 aaPredicted RBP7.62□□□□□ -1.19
PHF3-204ENST00000481385 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
PHF3-204ENST00000481385 A8MUU9 505 aa7.61□□□□□ -1.19
PHF3-204ENST00000481385 PMAIP1Q13794 54 aa7.59□□□□□ -1.2
PHF3-204ENST00000481385 RYR1P21817 5038 aa7.58□□□□□ -1.2
PHF3-204ENST00000481385 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
PHF3-204ENST00000481385 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
PHF3-204ENST00000481385 A0A1B0GU69 56 aa7.56□□□□□ -1.2
PHF3-204ENST00000481385 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
PHF3-204ENST00000481385 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
PHF3-204ENST00000481385 KIAA1109Q2LD37 5005 aa7.51□□□□□ -1.21
PHF3-204ENST00000481385 A6NN06 94 aa7.5□□□□□ -1.21
PHF3-204ENST00000481385 Q5VSD8 79 aa7.5□□□□□ -1.21
PHF3-204ENST00000481385 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
PHF3-204ENST00000481385 EPPK1P58107 5090 aaKnown RBP7.44□□□□□ -1.22
PHF3-204ENST00000481385 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
PHF3-204ENST00000481385 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
PHF3-204ENST00000481385 UQCR11O14957 56 aa7.39□□□□□ -1.23
PHF3-204ENST00000481385 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
PHF3-204ENST00000481385 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
PHF3-204ENST00000481385 LPAP08519 4548 aa7.36□□□□□ -1.23
PHF3-204ENST00000481385 COX6B2Q6YFQ2 88 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms