RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 KRTAP1-5Q9BYS1 174 aa7.69□□□□□ -1.18
RTFDC1-207ENST00000477573 DNAH7Q8WXX0 4024 aa7.69□□□□□ -1.18
RTFDC1-207ENST00000477573 LYSTQ99698 3801 aa7.69□□□□□ -1.18
RTFDC1-207ENST00000477573 PLECQ15149 4684 aaKnown RBP7.68□□□□□ -1.18
RTFDC1-207ENST00000477573 KRTAP21-3Q3LHN1 58 aa7.68□□□□□ -1.18
RTFDC1-207ENST00000477573 DNHD1Q96M86 4753 aa7.68□□□□□ -1.18
RTFDC1-207ENST00000477573 CSMD3Q7Z407 3707 aa7.68□□□□□ -1.18
RTFDC1-207ENST00000477573 ALMS1Q8TCU4 4167 aa7.68□□□□□ -1.18
RTFDC1-207ENST00000477573 MEGF8Q7Z7M0 2845 aa7.67□□□□□ -1.18
RTFDC1-207ENST00000477573 P0C880 135 aa7.67□□□□□ -1.18
RTFDC1-207ENST00000477573 TENM2Q9NT68 2774 aa7.67□□□□□ -1.18
RTFDC1-207ENST00000477573 NBDYA0A0U1RRE5 68 aa7.66□□□□□ -1.18
RTFDC1-207ENST00000477573 DNAH10Q8IVF4 4471 aa7.62□□□□□ -1.19
RTFDC1-207ENST00000477573 VPS13DQ5THJ4 4388 aa7.62□□□□□ -1.19
RTFDC1-207ENST00000477573 LINC00483Q53H64 154 aa7.61□□□□□ -1.19
RTFDC1-207ENST00000477573 DMAC1Q96GE9 116 aa7.61□□□□□ -1.19
RTFDC1-207ENST00000477573 IGLV5-52A0A0A0MRZ9 124 aa7.6□□□□□ -1.19
RTFDC1-207ENST00000477573 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
RTFDC1-207ENST00000477573 A0A0G2JQZ4 141 aa7.59□□□□□ -1.19
RTFDC1-207ENST00000477573 A0A1W2PNN7 141 aa7.59□□□□□ -1.19
RTFDC1-207ENST00000477573 STARD9Q9P2P6 4700 aa7.58□□□□□ -1.2
RTFDC1-207ENST00000477573 KRTAP16-1A8MUX0 517 aa7.56□□□□□ -1.2
RTFDC1-207ENST00000477573 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
RTFDC1-207ENST00000477573 A0A096LNI7 61 aa7.56□□□□□ -1.2
RTFDC1-207ENST00000477573 A8MUU9 505 aa7.56□□□□□ -1.2
RTFDC1-207ENST00000477573 C8orf17Q9NRJ1 99 aa7.55□□□□□ -1.2
RTFDC1-207ENST00000477573 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
RTFDC1-207ENST00000477573 IGLV7-43P04211 117 aa7.53□□□□□ -1.2
RTFDC1-207ENST00000477573 FBN3Q75N90 2809 aa7.51□□□□□ -1.21
RTFDC1-207ENST00000477573 MRPL34Q9BQ48 92 aaKnown RBP7.5□□□□□ -1.21
RTFDC1-207ENST00000477573 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
RTFDC1-207ENST00000477573 A0A087WTM6 91 aa7.49□□□□□ -1.21
RTFDC1-207ENST00000477573 SPRR1BP22528 89 aa7.48□□□□□ -1.21
RTFDC1-207ENST00000477573 LY6G6CO95867 125 aa7.46□□□□□ -1.21
RTFDC1-207ENST00000477573 CHTF8P0CG12 524 aa7.46□□□□□ -1.21
RTFDC1-207ENST00000477573 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.21
RTFDC1-207ENST00000477573 LINC00304Q8N9R0 145 aa7.45□□□□□ -1.22
RTFDC1-207ENST00000477573 TGP01266 2768 aa7.45□□□□□ -1.22
RTFDC1-207ENST00000477573 DNAH2Q9P225 4427 aa7.45□□□□□ -1.22
RTFDC1-207ENST00000477573 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
RTFDC1-207ENST00000477573 KMT2AQ03164 3969 aa7.44□□□□□ -1.22
RTFDC1-207ENST00000477573 DNAH6Q9C0G6 4158 aa7.44□□□□□ -1.22
RTFDC1-207ENST00000477573 KRTAP13-3Q3SY46 172 aa7.44□□□□□ -1.22
RTFDC1-207ENST00000477573 Q96NJ1 140 aa7.43□□□□□ -1.22
RTFDC1-207ENST00000477573 SPACA4Q8TDM5 124 aa7.41□□□□□ -1.22
RTFDC1-207ENST00000477573 HECTD4Q9Y4D8 3996 aa7.4□□□□□ -1.22
RTFDC1-207ENST00000477573 DNAH17Q9UFH2 4485 aa7.4□□□□□ -1.22
RTFDC1-207ENST00000477573 PRLHP81277 87 aa7.39□□□□□ -1.23
RTFDC1-207ENST00000477573 NDUFAF8A1L188 74 aa7.38□□□□□ -1.23
RTFDC1-207ENST00000477573 PANO1I0J062 215 aa7.37□□□□□ -1.23
RTFDC1-207ENST00000477573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.37□□□□□ -1.23
RTFDC1-207ENST00000477573 CDK2AP2O75956 126 aa7.36□□□□□ -1.23
RTFDC1-207ENST00000477573 Q5W150 140 aa7.35□□□□□ -1.23
RTFDC1-207ENST00000477573 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
RTFDC1-207ENST00000477573 SPINT4Q6UDR6 99 aa7.31□□□□□ -1.24
RTFDC1-207ENST00000477573 KRTAP13-1Q8IUC0 172 aa7.29□□□□□ -1.24
RTFDC1-207ENST00000477573 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
RTFDC1-207ENST00000477573 FRAS1Q86XX4 4008 aa7.28□□□□□ -1.24
RTFDC1-207ENST00000477573 H0YAA0 97 aa7.26□□□□□ -1.25
RTFDC1-207ENST00000477573 K7ERS5 55 aa7.26□□□□□ -1.25
RTFDC1-207ENST00000477573 PSORS1C2Q9UIG4 136 aa7.26□□□□□ -1.25
RTFDC1-207ENST00000477573 DNAH8Q96JB1 4490 aa7.25□□□□□ -1.25
RTFDC1-207ENST00000477573 DNAH11Q96DT5 4516 aa7.25□□□□□ -1.25
RTFDC1-207ENST00000477573 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
RTFDC1-207ENST00000477573 SSBP3-AS1Q7Z2R9 100 aa7.24□□□□□ -1.25
RTFDC1-207ENST00000477573 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
RTFDC1-207ENST00000477573 KRTAP10-2P60368 255 aa7.23□□□□□ -1.25
RTFDC1-207ENST00000477573 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
RTFDC1-207ENST00000477573 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
RTFDC1-207ENST00000477573 FAM229AH3BQW9 127 aa7.22□□□□□ -1.25
RTFDC1-207ENST00000477573 FAT2Q9NYQ8 4349 aa7.21□□□□□ -1.26
RTFDC1-207ENST00000477573 Q6ZSA8 131 aa7.21□□□□□ -1.26
RTFDC1-207ENST00000477573 ANAPC11Q9NYG5 84 aa7.2□□□□□ -1.26
RTFDC1-207ENST00000477573 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
RTFDC1-207ENST00000477573 CIRBP-AS1Q8TBR5 109 aa7.18□□□□□ -1.26
RTFDC1-207ENST00000477573 HYDINQ4G0P3 5121 aa7.18□□□□□ -1.26
RTFDC1-207ENST00000477573 PKD1P98161 4303 aa7.18□□□□□ -1.26
RTFDC1-207ENST00000477573 SACSQ9NZJ4 4579 aa7.16□□□□□ -1.26
RTFDC1-207ENST00000477573 KRTAP10-1P60331 282 aa7.15□□□□□ -1.26
RTFDC1-207ENST00000477573 CRIPTQ9P021 101 aa7.15□□□□□ -1.27
RTFDC1-207ENST00000477573 IGLV9-49A0A0B4J1Y8 123 aa7.14□□□□□ -1.27
RTFDC1-207ENST00000477573 IGKV2D-30A0A075B6S6 120 aa7.13□□□□□ -1.27
RTFDC1-207ENST00000477573 A0A1B0GU33 70 aa7.11□□□□□ -1.27
RTFDC1-207ENST00000477573 H1FX-AS1Q4G0G2 97 aa7.06□□□□□ -1.28
RTFDC1-207ENST00000477573 LRP1BQ9NZR2 4599 aa7.05□□□□□ -1.28
RTFDC1-207ENST00000477573 FLG2Q5D862 2391 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-207ENST00000477573 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
RTFDC1-207ENST00000477573 PKHD1P08F94 4074 aa7.02□□□□□ -1.29
RTFDC1-207ENST00000477573 VPS13BQ7Z7G8 4022 aa6.99□□□□□ -1.29
RTFDC1-207ENST00000477573 SPINK1P00995 79 aa6.99□□□□□ -1.29
RTFDC1-207ENST00000477573 A0A1B0GVY2 172 aa6.98□□□□□ -1.29
RTFDC1-207ENST00000477573 SPINK6Q6UWN8 80 aa6.95□□□□□ -1.3
RTFDC1-207ENST00000477573 DYNC1H1Q14204 4646 aaKnown RBP6.95□□□□□ -1.3
RTFDC1-207ENST00000477573 RYR2Q92736 4967 aa6.94□□□□□ -1.3
RTFDC1-207ENST00000477573 TYMSOSQ8TAI1 123 aa6.93□□□□□ -1.3
RTFDC1-207ENST00000477573 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
RTFDC1-207ENST00000477573 KRTAP13-2Q52LG2 175 aa6.91□□□□□ -1.3
RTFDC1-207ENST00000477573 KMT2CQ8NEZ4 4911 aaKnown RBP6.89□□□□□ -1.31
RTFDC1-207ENST00000477573 APOBP04114 4563 aaKnown RBP6.88□□□□□ -1.31
RTFDC1-207ENST00000477573 COX6B2Q6YFQ2 88 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 881.7 ms