RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 ATRQ13535 2644 aa0.7□□□□□ -2.3
SOX2-OT-207ENST00000476964 VWFP04275 2813 aa0.69□□□□□ -2.3
SOX2-OT-207ENST00000476964 PRM1P04553 51 aa0.69□□□□□ -2.3
SOX2-OT-207ENST00000476964 SRRM2Q9UQ35 2752 aaKnown RBP0.69□□□□□ -2.3
SOX2-OT-207ENST00000476964 CHD6Q8TD26 2715 aa0.69□□□□□ -2.3
SOX2-OT-207ENST00000476964 UBR5O95071 2799 aaPredicted RBP0.68□□□□□ -2.3
SOX2-OT-207ENST00000476964 SPTBN4Q9H254 2564 aa0.68□□□□□ -2.3
SOX2-OT-207ENST00000476964 CELSR1Q9NYQ6 3014 aa0.68□□□□□ -2.3
SOX2-OT-207ENST00000476964 H3BUX3 64 aa0.68□□□□□ -2.3
SOX2-OT-207ENST00000476964 DEFB136Q30KP8 78 aa0.68□□□□□ -2.3
SOX2-OT-207ENST00000476964 TENM4Q6N022 2769 aa0.68□□□□□ -2.3
SOX2-OT-207ENST00000476964 TNRC18O15417 2968 aaPredicted RBP0.68□□□□□ -2.3
SOX2-OT-207ENST00000476964 NBASA2RRP1 2371 aa0.68□□□□□ -2.3
SOX2-OT-207ENST00000476964 NAV2Q8IVL1 2488 aa0.67□□□□□ -2.3
SOX2-OT-207ENST00000476964 DEFB1P60022 68 aa0.67□□□□□ -2.3
SOX2-OT-207ENST00000476964 GCN1Q92616 2671 aaKnown RBP0.66□□□□□ -2.3
SOX2-OT-207ENST00000476964 HIVEP3Q5T1R4 2406 aa0.66□□□□□ -2.3
SOX2-OT-207ENST00000476964 TENM2Q9NT68 2774 aa0.65□□□□□ -2.3
SOX2-OT-207ENST00000476964 CHD7Q9P2D1 2997 aa0.65□□□□□ -2.31
SOX2-OT-207ENST00000476964 USP24Q9UPU5 2620 aa0.65□□□□□ -2.31
SOX2-OT-207ENST00000476964 STATHP02808 62 aa0.65□□□□□ -2.31
SOX2-OT-207ENST00000476964 CSMD3Q7Z407 3707 aa0.65□□□□□ -2.31
SOX2-OT-207ENST00000476964 TNXBP22105 4242 aa0.64□□□□□ -2.31
SOX2-OT-207ENST00000476964 OTOGQ6ZRI0 2925 aa0.63□□□□□ -2.31
SOX2-OT-207ENST00000476964 MAP1BP46821 2468 aaKnown RBP0.63□□□□□ -2.31
SOX2-OT-207ENST00000476964 DMBT1Q9UGM3 2413 aaPredicted RBP0.62□□□□□ -2.31
SOX2-OT-207ENST00000476964 SETD2Q9BYW2 2564 aaPredicted RBP0.62□□□□□ -2.31
SOX2-OT-207ENST00000476964 PTPN13Q12923 2485 aa0.62□□□□□ -2.31
SOX2-OT-207ENST00000476964 CRYBG3Q68DQ2 2970 aa0.62□□□□□ -2.31
SOX2-OT-207ENST00000476964 PDZD2O15018 2839 aa0.61□□□□□ -2.31
SOX2-OT-207ENST00000476964 ZFYVE26Q68DK2 2539 aa0.61□□□□□ -2.31
SOX2-OT-207ENST00000476964 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
SOX2-OT-207ENST00000476964 ACANP16112 2415 aa0.6□□□□□ -2.31
SOX2-OT-207ENST00000476964 CHD8Q9HCK8 2581 aa0.6□□□□□ -2.31
SOX2-OT-207ENST00000476964 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
SOX2-OT-207ENST00000476964 MTORP42345 2549 aa0.6□□□□□ -2.31
SOX2-OT-207ENST00000476964 APC2O95996 2303 aa0.6□□□□□ -2.31
SOX2-OT-207ENST00000476964 DNAH11Q96DT5 4516 aa0.59□□□□□ -2.31
SOX2-OT-207ENST00000476964 NCOR2Q9Y618 2525 aa0.59□□□□□ -2.31
SOX2-OT-207ENST00000476964 DEFB124Q8NES8 71 aa0.59□□□□□ -2.31
SOX2-OT-207ENST00000476964 USP9YO00507 2555 aaPredicted RBP0.59□□□□□ -2.32
SOX2-OT-207ENST00000476964 VPS13DQ5THJ4 4388 aa0.59□□□□□ -2.32
SOX2-OT-207ENST00000476964 CACNA1AO00555 2505 aa0.59□□□□□ -2.32
SOX2-OT-207ENST00000476964 VPS13BQ7Z7G8 4022 aa0.58□□□□□ -2.32
SOX2-OT-207ENST00000476964 A0A096LPF7 62 aa0.58□□□□□ -2.32
SOX2-OT-207ENST00000476964 DEFB133Q30KQ1 61 aa0.58□□□□□ -2.32
SOX2-OT-207ENST00000476964 LRRK2Q5S007 2527 aa0.58□□□□□ -2.32
SOX2-OT-207ENST00000476964 ANK2Q01484 3957 aa0.57□□□□□ -2.32
SOX2-OT-207ENST00000476964 LYSTQ99698 3801 aa0.57□□□□□ -2.32
SOX2-OT-207ENST00000476964 NF1P21359 2839 aa0.57□□□□□ -2.32
SOX2-OT-207ENST00000476964 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
SOX2-OT-207ENST00000476964 ACACBO00763 2458 aa0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 FLNCQ14315 2725 aa0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 SPRR2DP22532 72 aa0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 DEFB108BQ8NET1 73 aa0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 STAB1Q9NY15 2570 aa0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 NSD1Q96L73 2696 aaPredicted RBP0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 SACSQ9NZJ4 4579 aa0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 MYCBP2O75592 4640 aa0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 MGAQ8IWI9 3026 aa0.56□□□□□ -2.32
SOX2-OT-207ENST00000476964 PRKDCP78527 4128 aaKnown RBP0.55□□□□□ -2.32
SOX2-OT-207ENST00000476964 ITPR3Q14573 2671 aa0.55□□□□□ -2.32
SOX2-OT-207ENST00000476964 RIF1Q5UIP0 2472 aaKnown RBP0.55□□□□□ -2.32
SOX2-OT-207ENST00000476964 ANKHD1Q8IWZ3 2542 aaKnown RBP0.55□□□□□ -2.32
SOX2-OT-207ENST00000476964 BSNQ9UPA5 3926 aa0.55□□□□□ -2.32
SOX2-OT-207ENST00000476964 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
SOX2-OT-207ENST00000476964 FAT2Q9NYQ8 4349 aa0.54□□□□□ -2.32
SOX2-OT-207ENST00000476964 FAM186AA6NE01 2351 aa0.54□□□□□ -2.32
SOX2-OT-207ENST00000476964 SPG11Q96JI7 2443 aa0.54□□□□□ -2.32
SOX2-OT-207ENST00000476964 KRTAP8-1Q8IUC2 63 aa0.54□□□□□ -2.32
SOX2-OT-207ENST00000476964 PKD1L1Q8TDX9 2849 aa0.54□□□□□ -2.32
SOX2-OT-207ENST00000476964 ZZEF1O43149 2961 aa0.54□□□□□ -2.32
SOX2-OT-207ENST00000476964 SETXQ7Z333 2677 aaKnown RBP0.53□□□□□ -2.32
SOX2-OT-207ENST00000476964 SPRR2BP35325 72 aa0.53□□□□□ -2.32
SOX2-OT-207ENST00000476964 ANKRD11Q6UB99 2663 aaPredicted RBP0.52□□□□□ -2.33
SOX2-OT-207ENST00000476964 FRYQ5TBA9 3013 aa0.52□□□□□ -2.33
SOX2-OT-207ENST00000476964 DMXL1Q9Y485 3027 aa0.52□□□□□ -2.33
SOX2-OT-207ENST00000476964 RANBP2P49792 3224 aaKnown RBP0.52□□□□□ -2.33
SOX2-OT-207ENST00000476964 TLN2Q9Y4G6 2542 aa0.52□□□□□ -2.33
SOX2-OT-207ENST00000476964 COL7A1Q02388 2944 aa0.52□□□□□ -2.33
SOX2-OT-207ENST00000476964 EPG5Q9HCE0 2579 aa0.51□□□□□ -2.33
SOX2-OT-207ENST00000476964 FLNBO75369 2602 aaKnown RBP0.51□□□□□ -2.33
SOX2-OT-207ENST00000476964 DNAH3Q8TD57 4116 aa0.51□□□□□ -2.33
SOX2-OT-207ENST00000476964 HUWE1Q7Z6Z7 4374 aaKnown RBP0.51□□□□□ -2.33
SOX2-OT-207ENST00000476964 ZFHX4Q86UP3 3567 aa0.51□□□□□ -2.33
SOX2-OT-207ENST00000476964 CELSR3Q9NYQ7 3312 aa0.51□□□□□ -2.33
SOX2-OT-207ENST00000476964 CEP250Q9BV73 2442 aa0.5□□□□□ -2.33
SOX2-OT-207ENST00000476964 TACC2O95359 2948 aa0.5□□□□□ -2.33
SOX2-OT-207ENST00000476964 UTP20O75691 2785 aaKnown RBP0.5□□□□□ -2.33
SOX2-OT-207ENST00000476964 KRTAP6-2Q3LI66 62 aa0.5□□□□□ -2.33
SOX2-OT-207ENST00000476964 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
SOX2-OT-207ENST00000476964 CUBNO60494 3623 aa0.5□□□□□ -2.33
SOX2-OT-207ENST00000476964 ANK3Q12955 4377 aaKnown RBP0.5□□□□□ -2.33
SOX2-OT-207ENST00000476964 PKHD1L1Q86WI1 4243 aa0.49□□□□□ -2.33
SOX2-OT-207ENST00000476964 SONP18583 2426 aaKnown RBP0.49□□□□□ -2.33
SOX2-OT-207ENST00000476964 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
SOX2-OT-207ENST00000476964 DYNC2H1Q8NCM8 4307 aaKnown RBP0.49□□□□□ -2.33
SOX2-OT-207ENST00000476964 CD52P31358 61 aa0.49□□□□□ -2.33
SOX2-OT-207ENST00000476964 SPRR2AP35326 72 aa0.49□□□□□ -2.33
SOX2-OT-207ENST00000476964 LINC01556Q5JQF7 62 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms