RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 NDUFB1O75438 58 aa16.35■□□□□ 0.21
VEGFA-211ENST00000476772 SCGB1A1P11684 91 aa16.33■□□□□ 0.2
VEGFA-211ENST00000476772 ABCA13Q86UQ4 5058 aa16.32■□□□□ 0.2
VEGFA-211ENST00000476772 A0A1B0GVX0 72 aa16.3■□□□□ 0.2
VEGFA-211ENST00000476772 IGHV6-1A0A0B4J1U7 121 aa16.27■□□□□ 0.2
VEGFA-211ENST00000476772 KRTAP29-1A8MX34 341 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-211ENST00000476772 HCG22E2RYF7 251 aa16.24■□□□□ 0.19
VEGFA-211ENST00000476772 RETNLBQ9BQ08 111 aa16.23■□□□□ 0.19
VEGFA-211ENST00000476772 MMP24-AS1A0A0U1RRL7 71 aa16.21■□□□□ 0.18
VEGFA-211ENST00000476772 WFDC13Q8IUB5 93 aa16.2■□□□□ 0.18
VEGFA-211ENST00000476772 C8orf17Q9NRJ1 99 aa16.2■□□□□ 0.18
VEGFA-211ENST00000476772 NOTCH2NLQ7Z3S9 236 aa16.18■□□□□ 0.18
VEGFA-211ENST00000476772 DMBT1Q9UGM3 2413 aaPredicted RBP16.16■□□□□ 0.18
VEGFA-211ENST00000476772 CASC2Q6XLA1 102 aa16.14■□□□□ 0.17
VEGFA-211ENST00000476772 ATOX1O00244 68 aa16.11■□□□□ 0.17
VEGFA-211ENST00000476772 hDV103S1A0JD37 113 aa16.1■□□□□ 0.17
VEGFA-211ENST00000476772 C8orf87E5RJ46 101 aa16.1■□□□□ 0.17
VEGFA-211ENST00000476772 LINC00313P59037 77 aa16.06■□□□□ 0.16
VEGFA-211ENST00000476772 ANAPC13Q9BS18 74 aa16.02■□□□□ 0.16
VEGFA-211ENST00000476772 J3QL48 77 aa16.02■□□□□ 0.15
VEGFA-211ENST00000476772 TMEM254Q8TBM7 123 aa16■□□□□ 0.15
VEGFA-211ENST00000476772 MRPL34Q9BQ48 92 aaKnown RBP15.99■□□□□ 0.15
VEGFA-211ENST00000476772 FP248Q71RG6 208 aaPredicted RBP15.97■□□□□ 0.15
VEGFA-211ENST00000476772 OCR1Q9BZK8 76 aa15.95■□□□□ 0.14
VEGFA-211ENST00000476772 KRTAP16-1A8MUX0 517 aa15.94■□□□□ 0.14
VEGFA-211ENST00000476772 SMIM20Q8N5G0 67 aa15.92■□□□□ 0.14
VEGFA-211ENST00000476772 C9orf92A6NGG3 77 aa15.92■□□□□ 0.14
VEGFA-211ENST00000476772 PCP4P48539 62 aa15.91■□□□□ 0.14
VEGFA-211ENST00000476772 TRAV7A0A075B6U4 112 aa15.9■□□□□ 0.14
VEGFA-211ENST00000476772 SERP2Q8N6R1 65 aa15.89■□□□□ 0.13
VEGFA-211ENST00000476772 IGLV7-46A0A075B6I9 117 aa15.87■□□□□ 0.13
VEGFA-211ENST00000476772 NDUFS5O43920 106 aa15.87■□□□□ 0.13
VEGFA-211ENST00000476772 PRR4Q16378 134 aa15.83■□□□□ 0.13
VEGFA-211ENST00000476772 Q8N9P0 234 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-211ENST00000476772 COX7CP15954 63 aa15.81■□□□□ 0.12
VEGFA-211ENST00000476772 PCLOQ9Y6V0 5065 aa15.8■□□□□ 0.12
VEGFA-211ENST00000476772 UQCRQO14949 82 aa15.76■□□□□ 0.11
VEGFA-211ENST00000476772 TP53AIP1Q9HCN2 124 aa15.76■□□□□ 0.11
VEGFA-211ENST00000476772 KRTAP13-3Q3SY46 172 aa15.74■□□□□ 0.11
VEGFA-211ENST00000476772 CCDC179H3BU77 68 aa15.71■□□□□ 0.11
VEGFA-211ENST00000476772 C20orf166-AS1Q96NR2 134 aa15.67■□□□□ 0.1
VEGFA-211ENST00000476772 A8MUU9 505 aa15.65■□□□□ 0.1
VEGFA-211ENST00000476772 C5orf47Q569G3 176 aa15.65■□□□□ 0.1
VEGFA-211ENST00000476772 TRAV22A0A0B4J277 110 aa15.63■□□□□ 0.09
VEGFA-211ENST00000476772 C20orf197Q8N268 126 aa15.63■□□□□ 0.09
VEGFA-211ENST00000476772 H0Y9P7 68 aa15.63■□□□□ 0.09
VEGFA-211ENST00000476772 Q5W150 140 aa15.63■□□□□ 0.09
VEGFA-211ENST00000476772 TPRXLQ17RH7 258 aa15.61■□□□□ 0.09
VEGFA-211ENST00000476772 XP32Q5T750 250 aa15.59■□□□□ 0.09
VEGFA-211ENST00000476772 MP68P56378 58 aa15.57■□□□□ 0.08
VEGFA-211ENST00000476772 Q75L30 129 aa15.57■□□□□ 0.08
VEGFA-211ENST00000476772 SNURFQ9Y675 71 aa15.55■□□□□ 0.08
VEGFA-211ENST00000476772 A0A0U1RQV1 116 aa15.54■□□□□ 0.08
VEGFA-211ENST00000476772 LINC00208Q96KT6 92 aa15.51■□□□□ 0.07
VEGFA-211ENST00000476772 ZCCHC13Q8WW36 166 aaKnown RBP15.51■□□□□ 0.07
VEGFA-211ENST00000476772 KLKP1Q107X0 134 aa15.49■□□□□ 0.07
VEGFA-211ENST00000476772 LPAP08519 4548 aa15.48■□□□□ 0.07
VEGFA-211ENST00000476772 CYSTM1Q9H1C7 97 aa15.48■□□□□ 0.07
VEGFA-211ENST00000476772 H3BPC8 53 aa15.47■□□□□ 0.07
VEGFA-211ENST00000476772 RPL37P61927 97 aaKnown RBP15.47■□□□□ 0.07
VEGFA-211ENST00000476772 C1orf64Q8NEQ6 169 aa15.46■□□□□ 0.07
VEGFA-211ENST00000476772 HERC1Q15751 4861 aa15.39■□□□□ 0.05
VEGFA-211ENST00000476772 LOC101927531A0A1B0GV80 90 aa15.35■□□□□ 0.05
VEGFA-211ENST00000476772 ATP11AUNQ6ZP68 121 aa15.35■□□□□ 0.05
VEGFA-211ENST00000476772 IGKV2-30P06310 120 aa15.32■□□□□ 0.04
VEGFA-211ENST00000476772 LRP2P98164 4655 aa15.31■□□□□ 0.04
VEGFA-211ENST00000476772 H7BZZ5 65 aa15.28■□□□□ 0.04
VEGFA-211ENST00000476772 IGKV2D-30A0A075B6S6 120 aa15.28■□□□□ 0.04
VEGFA-211ENST00000476772 CYP4F30PQ9H0H9 118 aa15.28■□□□□ 0.04
VEGFA-211ENST00000476772 NDUFC1O43677 76 aa15.27■□□□□ 0.03
VEGFA-211ENST00000476772 PCOTHQ58A44 107 aa15.23■□□□□ 0.03
VEGFA-211ENST00000476772 HMCN2Q8NDA2 5059 aa15.21■□□□□ 0.03
VEGFA-211ENST00000476772 C7orf65Q6ZTY9 151 aa15.2■□□□□ 0.02
VEGFA-211ENST00000476772 SPINK7P58062 85 aa15.13■□□□□ 0.01
VEGFA-211ENST00000476772 TMEM258P61165 79 aa15.09■□□□□ 0.01
VEGFA-211ENST00000476772 SEC61BP60468 96 aaKnown RBP15.06■□□□□ 0
VEGFA-211ENST00000476772 HRES1P13985 223 aa15.04■□□□□ -0
VEGFA-211ENST00000476772 MUC17Q685J3 4493 aa15□□□□□ -0.01
VEGFA-211ENST00000476772 SPANXA2-OT1Q8N9U9 137 aa15□□□□□ -0.01
VEGFA-211ENST00000476772 FAM236DA0A1B0GTK5 79 aa14.99□□□□□ -0.01
VEGFA-211ENST00000476772 FAM236CP0DP71 79 aa14.99□□□□□ -0.01
VEGFA-211ENST00000476772 ATP5EP56381 51 aaPredicted RBP14.9□□□□□ -0.02
VEGFA-211ENST00000476772 C4orf26Q17RF5 130 aa14.89□□□□□ -0.03
VEGFA-211ENST00000476772 KRTAP4-1Q9BYQ7 146 aa14.81□□□□□ -0.04
VEGFA-211ENST00000476772 DMAC1Q96GE9 116 aa14.77□□□□□ -0.05
VEGFA-211ENST00000476772 COX6B2Q6YFQ2 88 aa14.71□□□□□ -0.05
VEGFA-211ENST00000476772 KRTAP3-1Q9BYR8 98 aa14.69□□□□□ -0.06
VEGFA-211ENST00000476772 MPLKIPQ8TAP9 179 aa14.68□□□□□ -0.06
VEGFA-211ENST00000476772 A8MUN3 132 aa14.64□□□□□ -0.07
VEGFA-211ENST00000476772 ACYP2P14621 99 aa14.64□□□□□ -0.07
VEGFA-211ENST00000476772 SERP1Q9Y6X1 66 aa14.62□□□□□ -0.07
VEGFA-211ENST00000476772 RBM12B-AS1Q9P1G2 102 aa14.58□□□□□ -0.07
VEGFA-211ENST00000476772 COA5Q86WW8 74 aa14.58□□□□□ -0.08
VEGFA-211ENST00000476772 UBR4Q5T4S7 5183 aa14.53□□□□□ -0.08
VEGFA-211ENST00000476772 MUC2Q02817 5179 aa14.5□□□□□ -0.09
VEGFA-211ENST00000476772 RPS28P62857 69 aaKnown RBP14.47□□□□□ -0.09
VEGFA-211ENST00000476772 CHKB-CPT1BH3BT56 60 aa14.42□□□□□ -0.1
VEGFA-211ENST00000476772 RNF213Q63HN8 5207 aa14.4□□□□□ -0.1
VEGFA-211ENST00000476772 H1FX-AS1Q4G0G2 97 aa14.4□□□□□ -0.1
VEGFA-211ENST00000476772 KRTAP19-2Q3LHN2 52 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms