RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 A0A1B0GVX0 72 aa3.57□□□□□ -1.84
CLK1-210ENST00000473565 CDK2AP2O75956 126 aa3.57□□□□□ -1.84
CLK1-210ENST00000473565 SMIM20Q8N5G0 67 aa3.57□□□□□ -1.84
CLK1-210ENST00000473565 C1orf195Q5TG92 126 aa3.57□□□□□ -1.84
CLK1-210ENST00000473565 C8orf17Q9NRJ1 99 aa3.57□□□□□ -1.84
CLK1-210ENST00000473565 Q5VSD8 79 aa3.56□□□□□ -1.84
CLK1-210ENST00000473565 hDV103S1A0JD37 113 aa3.56□□□□□ -1.84
CLK1-210ENST00000473565 C4orf48Q5BLP8 95 aa3.56□□□□□ -1.84
CLK1-210ENST00000473565 TMEM254Q8TBM7 123 aa3.56□□□□□ -1.84
CLK1-210ENST00000473565 TNXBP22105 4242 aa3.56□□□□□ -1.84
CLK1-210ENST00000473565 LINC00304Q8N9R0 145 aa3.55□□□□□ -1.84
CLK1-210ENST00000473565 FAT3Q8TDW7 4589 aa3.55□□□□□ -1.84
CLK1-210ENST00000473565 FAM229AH3BQW9 127 aa3.55□□□□□ -1.84
CLK1-210ENST00000473565 NDUFS5O43920 106 aa3.54□□□□□ -1.84
CLK1-210ENST00000473565 DMBT1Q9UGM3 2413 aaPredicted RBP3.53□□□□□ -1.84
CLK1-210ENST00000473565 A0A0U1RQV1 116 aa3.53□□□□□ -1.84
CLK1-210ENST00000473565 KLKP1Q107X0 134 aa3.53□□□□□ -1.84
CLK1-210ENST00000473565 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
CLK1-210ENST00000473565 H7BZZ5 65 aa3.53□□□□□ -1.84
CLK1-210ENST00000473565 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
CLK1-210ENST00000473565 SPINK1P00995 79 aa3.52□□□□□ -1.85
CLK1-210ENST00000473565 RETNLBQ9BQ08 111 aa3.52□□□□□ -1.85
CLK1-210ENST00000473565 Q5XG85 94 aa3.52□□□□□ -1.85
CLK1-210ENST00000473565 MRPL34Q9BQ48 92 aaKnown RBP3.51□□□□□ -1.85
CLK1-210ENST00000473565 H0Y9P7 68 aa3.51□□□□□ -1.85
CLK1-210ENST00000473565 LINC00208Q96KT6 92 aa3.51□□□□□ -1.85
CLK1-210ENST00000473565 LINC00313P59037 77 aa3.5□□□□□ -1.85
CLK1-210ENST00000473565 C5orf47Q569G3 176 aa3.5□□□□□ -1.85
CLK1-210ENST00000473565 Q8N1X5 172 aa3.5□□□□□ -1.85
CLK1-210ENST00000473565 XP32Q5T750 250 aa3.49□□□□□ -1.85
CLK1-210ENST00000473565 TMEM258P61165 79 aa3.49□□□□□ -1.85
CLK1-210ENST00000473565 MP68P56378 58 aa3.49□□□□□ -1.85
CLK1-210ENST00000473565 Q5W150 140 aa3.49□□□□□ -1.85
CLK1-210ENST00000473565 ZCCHC13Q8WW36 166 aaKnown RBP3.49□□□□□ -1.85
CLK1-210ENST00000473565 TRAV22A0A0B4J277 110 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 PRR4Q16378 134 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 SPAG11AQ6PDA7 123 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 FAM236DA0A1B0GTK5 79 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 C9orf92A6NGG3 77 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 FAM236CP0DP71 79 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 C1orf64Q8NEQ6 169 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 KRTAP4-5Q9BYR2 181 aa3.48□□□□□ -1.85
CLK1-210ENST00000473565 C8orf87E5RJ46 101 aa3.47□□□□□ -1.85
CLK1-210ENST00000473565 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
CLK1-210ENST00000473565 PCOTHQ58A44 107 aa3.46□□□□□ -1.86
CLK1-210ENST00000473565 OXTP01178 125 aa3.46□□□□□ -1.86
CLK1-210ENST00000473565 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
CLK1-210ENST00000473565 TP53AIP1Q9HCN2 124 aa3.46□□□□□ -1.86
CLK1-210ENST00000473565 NDUFC1O43677 76 aa3.45□□□□□ -1.86
CLK1-210ENST00000473565 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
CLK1-210ENST00000473565 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
CLK1-210ENST00000473565 MT1HL1P0DM35 61 aa3.43□□□□□ -1.86
CLK1-210ENST00000473565 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
CLK1-210ENST00000473565 HERC2O95714 4834 aa3.42□□□□□ -1.86
CLK1-210ENST00000473565 H3BPC8 53 aa3.41□□□□□ -1.86
CLK1-210ENST00000473565 IGKV2D-30A0A075B6S6 120 aa3.4□□□□□ -1.87
CLK1-210ENST00000473565 IGKV2-30P06310 120 aa3.4□□□□□ -1.87
CLK1-210ENST00000473565 CYP4F30PQ9H0H9 118 aa3.39□□□□□ -1.87
CLK1-210ENST00000473565 SERP1Q9Y6X1 66 aa3.38□□□□□ -1.87
CLK1-210ENST00000473565 LOC101927531A0A1B0GV80 90 aa3.38□□□□□ -1.87
CLK1-210ENST00000473565 ATP5EP56381 51 aaPredicted RBP3.38□□□□□ -1.87
CLK1-210ENST00000473565 LPAP08519 4548 aa3.38□□□□□ -1.87
CLK1-210ENST00000473565 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
CLK1-210ENST00000473565 IGLV7-46A0A075B6I9 117 aa3.36□□□□□ -1.87
CLK1-210ENST00000473565 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
CLK1-210ENST00000473565 A8MUU9 505 aa3.36□□□□□ -1.87
CLK1-210ENST00000473565 HRES1P13985 223 aa3.36□□□□□ -1.87
CLK1-210ENST00000473565 C20orf166-AS1Q96NR2 134 aa3.36□□□□□ -1.87
CLK1-210ENST00000473565 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
CLK1-210ENST00000473565 LRP2P98164 4655 aa3.36□□□□□ -1.87
CLK1-210ENST00000473565 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
CLK1-210ENST00000473565 FP248Q71RG6 208 aaPredicted RBP3.34□□□□□ -1.88
CLK1-210ENST00000473565 PCLOQ9Y6V0 5065 aa3.34□□□□□ -1.88
CLK1-210ENST00000473565 MPLKIPQ8TAP9 179 aa3.32□□□□□ -1.88
CLK1-210ENST00000473565 COA5Q86WW8 74 aa3.32□□□□□ -1.88
CLK1-210ENST00000473565 C7orf65Q6ZTY9 151 aa3.31□□□□□ -1.88
CLK1-210ENST00000473565 Q75L30 129 aa3.31□□□□□ -1.88
CLK1-210ENST00000473565 C4orf26Q17RF5 130 aa3.31□□□□□ -1.88
CLK1-210ENST00000473565 SMIM26A0A096LP01 95 aa3.31□□□□□ -1.88
CLK1-210ENST00000473565 HERC1Q15751 4861 aa3.3□□□□□ -1.88
CLK1-210ENST00000473565 J3QL48 77 aa3.3□□□□□ -1.88
CLK1-210ENST00000473565 SPINK7P58062 85 aa3.3□□□□□ -1.88
CLK1-210ENST00000473565 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
CLK1-210ENST00000473565 ATP11AUNQ6ZP68 121 aa3.29□□□□□ -1.88
CLK1-210ENST00000473565 DMAC1Q96GE9 116 aa3.28□□□□□ -1.88
CLK1-210ENST00000473565 ACYP2P14621 99 aa3.26□□□□□ -1.89
CLK1-210ENST00000473565 PSPHP1O15172 72 aa3.25□□□□□ -1.89
CLK1-210ENST00000473565 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
CLK1-210ENST00000473565 KRTAP3-1Q9BYR8 98 aa3.25□□□□□ -1.89
CLK1-210ENST00000473565 CHKB-CPT1BH3BT56 60 aa3.24□□□□□ -1.89
CLK1-210ENST00000473565 A8MUN3 132 aa3.23□□□□□ -1.89
CLK1-210ENST00000473565 Q1T7F1 81 aa3.22□□□□□ -1.89
CLK1-210ENST00000473565 HMCN2Q8NDA2 5059 aa3.21□□□□□ -1.9
CLK1-210ENST00000473565 PRR15LQ9BU68 103 aa3.21□□□□□ -1.9
CLK1-210ENST00000473565 MUC2Q02817 5179 aa3.2□□□□□ -1.9
CLK1-210ENST00000473565 COX6B2Q6YFQ2 88 aa3.19□□□□□ -1.9
CLK1-210ENST00000473565 MUC17Q685J3 4493 aa3.19□□□□□ -1.9
CLK1-210ENST00000473565 Q5VV11 94 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms