RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 TRBV7-4A0A0J9YYF1 115 aa5.04□□□□□ -1.6
MCF2L-223ENST00000473345 RBM3P98179 157 aaKnown RBP5.04□□□□□ -1.6
MCF2L-223ENST00000473345 LOC110117498A0A087WWA1 95 aa5.03□□□□□ -1.6
MCF2L-223ENST00000473345 C1orf195Q5TG92 126 aa5.03□□□□□ -1.6
MCF2L-223ENST00000473345 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
MCF2L-223ENST00000473345 PDE6GP18545 87 aa5.02□□□□□ -1.61
MCF2L-223ENST00000473345 COX6B2Q6YFQ2 88 aa5.02□□□□□ -1.61
MCF2L-223ENST00000473345 Q6ZQT0 140 aa5.02□□□□□ -1.61
MCF2L-223ENST00000473345 C14orf132Q9NPU4 83 aa5.01□□□□□ -1.61
MCF2L-223ENST00000473345 CCKP06307 115 aa5□□□□□ -1.61
MCF2L-223ENST00000473345 DSCR8Q96T75 97 aa5□□□□□ -1.61
MCF2L-223ENST00000473345 FAM240AA0A1B0GVK7 77 aa4.99□□□□□ -1.61
MCF2L-223ENST00000473345 Q6JHZ5 121 aa4.99□□□□□ -1.61
MCF2L-223ENST00000473345 F8WEM9 126 aa4.98□□□□□ -1.61
MCF2L-223ENST00000473345 J3QR89 54 aa4.98□□□□□ -1.61
MCF2L-223ENST00000473345 K7ERU9 68 aa4.98□□□□□ -1.61
MCF2L-223ENST00000473345 Q6Q795 121 aa4.98□□□□□ -1.61
MCF2L-223ENST00000473345 IGFL1Q6UW32 110 aa4.98□□□□□ -1.61
MCF2L-223ENST00000473345 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
MCF2L-223ENST00000473345 A0A1B0GV72 72 aa4.97□□□□□ -1.61
MCF2L-223ENST00000473345 A0A1B0GW54 56 aa4.97□□□□□ -1.61
MCF2L-223ENST00000473345 A0A1W2PNM2 257 aa4.97□□□□□ -1.61
MCF2L-223ENST00000473345 ACYP1P07311 99 aa4.96□□□□□ -1.62
MCF2L-223ENST00000473345 MT2AP02795 61 aa4.94□□□□□ -1.62
MCF2L-223ENST00000473345 LINC00846Q9NV44 126 aa4.93□□□□□ -1.62
MCF2L-223ENST00000473345 TRBV7-7A0A0K0K1E9 115 aa4.92□□□□□ -1.62
MCF2L-223ENST00000473345 MT1FP04733 61 aa4.92□□□□□ -1.62
MCF2L-223ENST00000473345 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
MCF2L-223ENST00000473345 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
MCF2L-223ENST00000473345 Q6ZVQ6 151 aa4.88□□□□□ -1.63
MCF2L-223ENST00000473345 A0A087WSZ3 146 aa4.87□□□□□ -1.63
MCF2L-223ENST00000473345 Q75L30 129 aa4.87□□□□□ -1.63
MCF2L-223ENST00000473345 UBL5Q9BZL1 73 aa4.87□□□□□ -1.63
MCF2L-223ENST00000473345 ATP11AUNQ6ZP68 121 aa4.86□□□□□ -1.63
MCF2L-223ENST00000473345 LINC00643Q86TS7 51 aa4.86□□□□□ -1.63
MCF2L-223ENST00000473345 NREPQ16612 68 aa4.85□□□□□ -1.63
MCF2L-223ENST00000473345 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
MCF2L-223ENST00000473345 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.63
MCF2L-223ENST00000473345 Q96NJ1 140 aa4.84□□□□□ -1.63
MCF2L-223ENST00000473345 LINC00472Q9H8W2 130 aa4.84□□□□□ -1.63
MCF2L-223ENST00000473345 SS18L2Q9UHA2 77 aa4.84□□□□□ -1.63
MCF2L-223ENST00000473345 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
MCF2L-223ENST00000473345 CXCL6P80162 114 aa4.82□□□□□ -1.64
MCF2L-223ENST00000473345 ATP5EP2Q5VTU8 51 aa4.82□□□□□ -1.64
MCF2L-223ENST00000473345 MT-ATP8P03928 68 aa4.81□□□□□ -1.64
MCF2L-223ENST00000473345 DSCR10P59022 87 aa4.8□□□□□ -1.64
MCF2L-223ENST00000473345 IMUPQ9GZP8 106 aa4.8□□□□□ -1.64
MCF2L-223ENST00000473345 J3KT08 172 aa4.79□□□□□ -1.64
MCF2L-223ENST00000473345 BPY2O14599 106 aa4.79□□□□□ -1.64
MCF2L-223ENST00000473345 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
MCF2L-223ENST00000473345 SIGMAR1Q99720 223 aa4.79□□□□□ -1.64
MCF2L-223ENST00000473345 A8MUU9 505 aa4.78□□□□□ -1.64
MCF2L-223ENST00000473345 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
MCF2L-223ENST00000473345 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
MCF2L-223ENST00000473345 IGKV3D-7A0A0C4DH55 119 aa4.77□□□□□ -1.65
MCF2L-223ENST00000473345 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
MCF2L-223ENST00000473345 IGKV4-1P06312 121 aa4.76□□□□□ -1.65
MCF2L-223ENST00000473345 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
MCF2L-223ENST00000473345 A8MWP4 228 aa4.75□□□□□ -1.65
MCF2L-223ENST00000473345 HRES1P13985 223 aa4.75□□□□□ -1.65
MCF2L-223ENST00000473345 K7EQZ3 153 aa4.74□□□□□ -1.65
MCF2L-223ENST00000473345 PRR15Q8IV56 129 aa4.74□□□□□ -1.65
MCF2L-223ENST00000473345 Q8N9L7 120 aa4.73□□□□□ -1.65
MCF2L-223ENST00000473345 A0A1B0GVX0 72 aa4.72□□□□□ -1.65
MCF2L-223ENST00000473345 A0A087WVE0 104 aa4.71□□□□□ -1.66
MCF2L-223ENST00000473345 NDUFB1O75438 58 aa4.71□□□□□ -1.66
MCF2L-223ENST00000473345 HIST1H4AP62805 103 aaKnown RBP4.71□□□□□ -1.66
MCF2L-223ENST00000473345 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
MCF2L-223ENST00000473345 MMP24-AS1A0A0U1RRL7 71 aa4.69□□□□□ -1.66
MCF2L-223ENST00000473345 SCGB1A1P11684 91 aa4.69□□□□□ -1.66
MCF2L-223ENST00000473345 NOTCH2NLQ7Z3S9 236 aa4.68□□□□□ -1.66
MCF2L-223ENST00000473345 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
MCF2L-223ENST00000473345 IGHV6-1A0A0B4J1U7 121 aa4.67□□□□□ -1.66
MCF2L-223ENST00000473345 HCG22E2RYF7 251 aa4.67□□□□□ -1.66
MCF2L-223ENST00000473345 C8orf87E5RJ46 101 aa4.67□□□□□ -1.66
MCF2L-223ENST00000473345 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
MCF2L-223ENST00000473345 FAM236DA0A1B0GTK5 79 aa4.66□□□□□ -1.66
MCF2L-223ENST00000473345 FAM236CP0DP71 79 aa4.66□□□□□ -1.66
MCF2L-223ENST00000473345 LINC00313P59037 77 aa4.66□□□□□ -1.66
MCF2L-223ENST00000473345 FAM236AA0A1B0GUQ0 79 aa4.65□□□□□ -1.67
MCF2L-223ENST00000473345 FAM236BA0A1B0GV22 79 aa4.65□□□□□ -1.67
MCF2L-223ENST00000473345 hDV103S1A0JD37 113 aa4.64□□□□□ -1.67
MCF2L-223ENST00000473345 CASC2Q6XLA1 102 aa4.64□□□□□ -1.67
MCF2L-223ENST00000473345 TMEM254Q8TBM7 123 aa4.64□□□□□ -1.67
MCF2L-223ENST00000473345 WFDC13Q8IUB5 93 aa4.63□□□□□ -1.67
MCF2L-223ENST00000473345 Q8N9P0 234 aaPredicted RBP4.62□□□□□ -1.67
MCF2L-223ENST00000473345 MRPL34Q9BQ48 92 aaKnown RBP4.62□□□□□ -1.67
MCF2L-223ENST00000473345 ATOX1O00244 68 aa4.61□□□□□ -1.67
MCF2L-223ENST00000473345 OCR1Q9BZK8 76 aa4.61□□□□□ -1.67
MCF2L-223ENST00000473345 NEBP20929 6669 aa4.59□□□□□ -1.67
MCF2L-223ENST00000473345 SMIM20Q8N5G0 67 aa4.59□□□□□ -1.67
MCF2L-223ENST00000473345 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
MCF2L-223ENST00000473345 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
MCF2L-223ENST00000473345 SERP2Q8N6R1 65 aa4.56□□□□□ -1.68
MCF2L-223ENST00000473345 UQCRQO14949 82 aa4.55□□□□□ -1.68
MCF2L-223ENST00000473345 COX7CP15954 63 aa4.54□□□□□ -1.68
MCF2L-223ENST00000473345 ANAPC13Q9BS18 74 aa4.54□□□□□ -1.68
MCF2L-223ENST00000473345 C5orf47Q569G3 176 aa4.53□□□□□ -1.68
MCF2L-223ENST00000473345 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
MCF2L-223ENST00000473345 TRAV22A0A0B4J277 110 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms