RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 Q6ZQY7 126 aa2.85□□□□□ -1.95
SF3B1-208ENST00000470268 TRBV7-6A0A0J9YX20 115 aa2.84□□□□□ -1.95
SF3B1-208ENST00000470268 H0Y9J4 135 aa2.84□□□□□ -1.95
SF3B1-208ENST00000470268 UBE2AP49459 152 aa2.84□□□□□ -1.95
SF3B1-208ENST00000470268 HIGD2AQ9BW72 106 aa2.84□□□□□ -1.95
SF3B1-208ENST00000470268 ORMDL1Q9P0S3 153 aa2.84□□□□□ -1.95
SF3B1-208ENST00000470268 SERP2Q8N6R1 65 aa2.83□□□□□ -1.96
SF3B1-208ENST00000470268 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
SF3B1-208ENST00000470268 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
SF3B1-208ENST00000470268 MT3P25713 68 aa2.83□□□□□ -1.96
SF3B1-208ENST00000470268 OBSCN-AS1Q96MR7 158 aa2.83□□□□□ -1.96
SF3B1-208ENST00000470268 LAMTOR3Q9UHA4 124 aa2.83□□□□□ -1.96
SF3B1-208ENST00000470268 KRTAP1-4P0C5Y4 121 aa2.82□□□□□ -1.96
SF3B1-208ENST00000470268 DEFB105AQ8NG35 78 aa2.82□□□□□ -1.96
SF3B1-208ENST00000470268 ANAPC11Q9NYG5 84 aa2.82□□□□□ -1.96
SF3B1-208ENST00000470268 IGKV3D-7A0A0C4DH55 119 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 INAFM2P0DMQ5 153 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 SPINK6Q6UWN8 80 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 DHRS4-AS1Q9P1J3 65 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
SF3B1-208ENST00000470268 A0A0G2JQZ4 141 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 Q6JHZ5 121 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 Q6ZVQ6 151 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 SPRR4Q96PI1 79 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 LINC00846Q9NV44 126 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 RBM12B-AS1Q9P1G2 102 aa2.81□□□□□ -1.96
SF3B1-208ENST00000470268 MYCBP2O75592 4640 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 TMEM256-PLSCR3K7ERE1 68 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 Q8N377 158 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 PKHD1L1Q86WI1 4243 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 IGLV5-48A0A075B6I7 105 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 A0A087WVE0 104 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 PRR15Q8IV56 129 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
SF3B1-208ENST00000470268 SPRR1BP22528 89 aa2.79□□□□□ -1.96
SF3B1-208ENST00000470268 LINC00483Q53H64 154 aa2.79□□□□□ -1.96
SF3B1-208ENST00000470268 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-208ENST00000470268 FAT3Q8TDW7 4589 aa2.78□□□□□ -1.96
SF3B1-208ENST00000470268 CCKP06307 115 aa2.78□□□□□ -1.96
SF3B1-208ENST00000470268 RBM3P98179 157 aaKnown RBP2.78□□□□□ -1.96
SF3B1-208ENST00000470268 KRTAP13-2Q52LG2 175 aa2.78□□□□□ -1.96
SF3B1-208ENST00000470268 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
SF3B1-208ENST00000470268 Q6ZQT0 140 aa2.78□□□□□ -1.96
SF3B1-208ENST00000470268 SERP1Q9Y6X1 66 aa2.78□□□□□ -1.96
SF3B1-208ENST00000470268 IGLV7-46A0A075B6I9 117 aa2.78□□□□□ -1.96
SF3B1-208ENST00000470268 ZNF706Q9Y5V0 76 aaPredicted RBP2.77□□□□□ -1.97
SF3B1-208ENST00000470268 JMJD7-PLA2G4BH0Y9G9 81 aa2.76□□□□□ -1.97
SF3B1-208ENST00000470268 C20orf197Q8N268 126 aa2.76□□□□□ -1.97
SF3B1-208ENST00000470268 TNXBP22105 4242 aa2.76□□□□□ -1.97
SF3B1-208ENST00000470268 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
SF3B1-208ENST00000470268 TRBV7-4A0A0J9YYF1 115 aa2.76□□□□□ -1.97
SF3B1-208ENST00000470268 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
SF3B1-208ENST00000470268 FAM229BQ4G0N7 80 aa2.76□□□□□ -1.97
SF3B1-208ENST00000470268 FLG2Q5D862 2391 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-208ENST00000470268 LOC110117498A0A087WWA1 95 aa2.75□□□□□ -1.97
SF3B1-208ENST00000470268 MOBPQ13875 183 aa2.75□□□□□ -1.97
SF3B1-208ENST00000470268 H7BZZ5 65 aa2.75□□□□□ -1.97
SF3B1-208ENST00000470268 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
SF3B1-208ENST00000470268 ATP5EP2Q5VTU8 51 aa2.75□□□□□ -1.97
SF3B1-208ENST00000470268 FP248Q71RG6 208 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-208ENST00000470268 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
SF3B1-208ENST00000470268 IGLV8-61A0A075B6I0 122 aa2.74□□□□□ -1.97
SF3B1-208ENST00000470268 A0A1W2PNM2 257 aa2.74□□□□□ -1.97
SF3B1-208ENST00000470268 Q8N9L7 120 aa2.74□□□□□ -1.97
SF3B1-208ENST00000470268 TRAV7A0A075B6U4 112 aa2.73□□□□□ -1.97
SF3B1-208ENST00000470268 IGFL1Q6UW32 110 aa2.73□□□□□ -1.97
SF3B1-208ENST00000470268 TYMSOSQ8TAI1 123 aa2.73□□□□□ -1.97
SF3B1-208ENST00000470268 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
SF3B1-208ENST00000470268 NDUFS5O43920 106 aa2.73□□□□□ -1.97
SF3B1-208ENST00000470268 Q8NBF4 154 aa2.73□□□□□ -1.97
SF3B1-208ENST00000470268 F8WEM9 126 aa2.72□□□□□ -1.97
SF3B1-208ENST00000470268 H3BQ85 93 aa2.72□□□□□ -1.97
SF3B1-208ENST00000470268 SSBP3-AS1Q7Z2R9 100 aa2.72□□□□□ -1.97
SF3B1-208ENST00000470268 KLKP1Q107X0 134 aa2.71□□□□□ -1.98
SF3B1-208ENST00000470268 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
SF3B1-208ENST00000470268 UBL5Q9BZL1 73 aa2.71□□□□□ -1.98
SF3B1-208ENST00000470268 SNURFQ9Y675 71 aa2.71□□□□□ -1.98
SF3B1-208ENST00000470268 BPY2O14599 106 aa2.71□□□□□ -1.98
SF3B1-208ENST00000470268 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
SF3B1-208ENST00000470268 A8MUN3 132 aa2.7□□□□□ -1.98
SF3B1-208ENST00000470268 ATP5EP56381 51 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-208ENST00000470268 LINC00304Q8N9R0 145 aa2.7□□□□□ -1.98
SF3B1-208ENST00000470268 OCR1Q9BZK8 76 aa2.7□□□□□ -1.98
SF3B1-208ENST00000470268 NDUFC1O43677 76 aa2.69□□□□□ -1.98
SF3B1-208ENST00000470268 PDE6GP18545 87 aa2.69□□□□□ -1.98
SF3B1-208ENST00000470268 MP68P56378 58 aa2.69□□□□□ -1.98
SF3B1-208ENST00000470268 HERC1Q15751 4861 aa2.68□□□□□ -1.98
SF3B1-208ENST00000470268 A0A087WSZ3 146 aa2.68□□□□□ -1.98
SF3B1-208ENST00000470268 NREPQ16612 68 aa2.68□□□□□ -1.98
SF3B1-208ENST00000470268 LCA10Q71F78 164 aa2.68□□□□□ -1.98
SF3B1-208ENST00000470268 KRTAP16-1A8MUX0 517 aa2.68□□□□□ -1.98
SF3B1-208ENST00000470268 SPINK1P00995 79 aa2.68□□□□□ -1.98
SF3B1-208ENST00000470268 IGKV4-1P06312 121 aa2.67□□□□□ -1.98
SF3B1-208ENST00000470268 LINC00313P59037 77 aa2.67□□□□□ -1.98
SF3B1-208ENST00000470268 SPAG11AQ6PDA7 123 aa2.67□□□□□ -1.98
SF3B1-208ENST00000470268 K7EQZ3 153 aa2.66□□□□□ -1.98
SF3B1-208ENST00000470268 DSCR10P59022 87 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms