RNA–Protein interactions for RNA: ENST00000470132.1

TOP2B-205, Transcript of DNA topoisomerase II beta, humanhuman

TSL 3

Gene TOP2B, Length 451 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-205ENST00000470132 DNAH11Q96DT5 4516 aa0.71□□□□□ -2.3
TOP2B-205ENST00000470132 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
TOP2B-205ENST00000470132 SETXQ7Z333 2677 aaKnown RBP0.7□□□□□ -2.3
TOP2B-205ENST00000470132 DNAH3Q8TD57 4116 aa0.7□□□□□ -2.3
TOP2B-205ENST00000470132 A8MTW9 85 aa0.69□□□□□ -2.3
TOP2B-205ENST00000470132 UBR5O95071 2799 aaPredicted RBP0.68□□□□□ -2.3
TOP2B-205ENST00000470132 PDZD2O15018 2839 aa0.67□□□□□ -2.3
TOP2B-205ENST00000470132 C9orf92A6NGG3 77 aa0.67□□□□□ -2.3
TOP2B-205ENST00000470132 SPRR2DP22532 72 aa0.67□□□□□ -2.3
TOP2B-205ENST00000470132 POLR2KP53803 58 aaKnown RBP0.67□□□□□ -2.3
TOP2B-205ENST00000470132 HIVEP3Q5T1R4 2406 aa0.67□□□□□ -2.3
TOP2B-205ENST00000470132 SETD2Q9BYW2 2564 aaPredicted RBP0.66□□□□□ -2.3
TOP2B-205ENST00000470132 SRRM2Q9UQ35 2752 aaKnown RBP0.65□□□□□ -2.3
TOP2B-205ENST00000470132 CACNA1AO00555 2505 aa0.65□□□□□ -2.31
TOP2B-205ENST00000470132 DNAH2Q9P225 4427 aa0.65□□□□□ -2.31
TOP2B-205ENST00000470132 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
TOP2B-205ENST00000470132 ACANP16112 2415 aa0.64□□□□□ -2.31
TOP2B-205ENST00000470132 NF1P21359 2839 aa0.64□□□□□ -2.31
TOP2B-205ENST00000470132 CLPSL2Q6UWE3 100 aa0.64□□□□□ -2.31
TOP2B-205ENST00000470132 NBASA2RRP1 2371 aa0.63□□□□□ -2.31
TOP2B-205ENST00000470132 M0QZ58 72 aa0.63□□□□□ -2.31
TOP2B-205ENST00000470132 RPL39P62891 51 aaKnown RBP0.63□□□□□ -2.31
TOP2B-205ENST00000470132 ANK3Q12955 4377 aaKnown RBP0.63□□□□□ -2.31
TOP2B-205ENST00000470132 NSD1Q96L73 2696 aaPredicted RBP0.63□□□□□ -2.31
TOP2B-205ENST00000470132 GCN1Q92616 2671 aaKnown RBP0.62□□□□□ -2.31
TOP2B-205ENST00000470132 FLNCQ14315 2725 aa0.62□□□□□ -2.31
TOP2B-205ENST00000470132 PKHD1L1Q86WI1 4243 aa0.62□□□□□ -2.31
TOP2B-205ENST00000470132 PKHD1P08F94 4074 aa0.61□□□□□ -2.31
TOP2B-205ENST00000470132 HECTD4Q9Y4D8 3996 aa0.61□□□□□ -2.31
TOP2B-205ENST00000470132 HSPG2P98160 4391 aa0.61□□□□□ -2.31
TOP2B-205ENST00000470132 SPRR2BP35325 72 aa0.61□□□□□ -2.31
TOP2B-205ENST00000470132 FLNBO75369 2602 aaKnown RBP0.61□□□□□ -2.31
TOP2B-205ENST00000470132 DNAH9Q9NYC9 4486 aa0.6□□□□□ -2.31
TOP2B-205ENST00000470132 NCOR2Q9Y618 2525 aa0.6□□□□□ -2.31
TOP2B-205ENST00000470132 ZZEF1O43149 2961 aa0.6□□□□□ -2.31
TOP2B-205ENST00000470132 HRNRQ86YZ3 2850 aaPredicted RBP0.59□□□□□ -2.31
TOP2B-205ENST00000470132 H3BNG1 76 aa0.59□□□□□ -2.31
TOP2B-205ENST00000470132 DYNC2H1Q8NCM8 4307 aaKnown RBP0.58□□□□□ -2.32
TOP2B-205ENST00000470132 TNP1P09430 55 aa0.58□□□□□ -2.32
TOP2B-205ENST00000470132 RPL39LQ96EH5 51 aaKnown RBP0.58□□□□□ -2.32
TOP2B-205ENST00000470132 VPS13DQ5THJ4 4388 aa0.58□□□□□ -2.32
TOP2B-205ENST00000470132 TACC2O95359 2948 aa0.58□□□□□ -2.32
TOP2B-205ENST00000470132 STAB1Q9NY15 2570 aa0.58□□□□□ -2.32
TOP2B-205ENST00000470132 NAV2Q8IVL1 2488 aa0.58□□□□□ -2.32
TOP2B-205ENST00000470132 WNK1Q9H4A3 2382 aa0.57□□□□□ -2.32
TOP2B-205ENST00000470132 APOBP04114 4563 aaKnown RBP0.57□□□□□ -2.32
TOP2B-205ENST00000470132 APC2O95996 2303 aa0.56□□□□□ -2.32
TOP2B-205ENST00000470132 SPTBN4Q9H254 2564 aa0.55□□□□□ -2.32
TOP2B-205ENST00000470132 DNAH6Q9C0G6 4158 aa0.55□□□□□ -2.32
TOP2B-205ENST00000470132 USP24Q9UPU5 2620 aa0.54□□□□□ -2.32
TOP2B-205ENST00000470132 ANKRD11Q6UB99 2663 aaPredicted RBP0.54□□□□□ -2.32
TOP2B-205ENST00000470132 FAT3Q8TDW7 4589 aa0.54□□□□□ -2.32
TOP2B-205ENST00000470132 DNAH7Q8WXX0 4024 aa0.54□□□□□ -2.32
TOP2B-205ENST00000470132 LRP1BQ9NZR2 4599 aa0.54□□□□□ -2.32
TOP2B-205ENST00000470132 FLGP20930 4061 aaPredicted RBP0.54□□□□□ -2.32
TOP2B-205ENST00000470132 IGSF10Q6WRI0 2623 aa0.53□□□□□ -2.32
TOP2B-205ENST00000470132 DMXL1Q9Y485 3027 aa0.52□□□□□ -2.33
TOP2B-205ENST00000470132 ACACAQ13085 2346 aa0.52□□□□□ -2.33
TOP2B-205ENST00000470132 EPG5Q9HCE0 2579 aa0.52□□□□□ -2.33
TOP2B-205ENST00000470132 FAT4Q6V0I7 4981 aa0.52□□□□□ -2.33
TOP2B-205ENST00000470132 CUBNO60494 3623 aa0.52□□□□□ -2.33
TOP2B-205ENST00000470132 MTORP42345 2549 aa0.52□□□□□ -2.33
TOP2B-205ENST00000470132 SPRR2AP35326 72 aa0.51□□□□□ -2.33
TOP2B-205ENST00000470132 RANBP2P49792 3224 aaKnown RBP0.51□□□□□ -2.33
TOP2B-205ENST00000470132 DNAH8Q96JB1 4490 aa0.51□□□□□ -2.33
TOP2B-205ENST00000470132 COL7A1Q02388 2944 aa0.51□□□□□ -2.33
TOP2B-205ENST00000470132 COL6A5A8TX70 2615 aa0.51□□□□□ -2.33
TOP2B-205ENST00000470132 ANKHD1Q8IWZ3 2542 aaKnown RBP0.5□□□□□ -2.33
TOP2B-205ENST00000470132 DEFB110Q30KQ9 67 aa0.5□□□□□ -2.33
TOP2B-205ENST00000470132 DMBT1Q9UGM3 2413 aaPredicted RBP0.49□□□□□ -2.33
TOP2B-205ENST00000470132 ARHGAP5-AS1Q96IT6 56 aa0.49□□□□□ -2.33
TOP2B-205ENST00000470132 RIF1Q5UIP0 2472 aaKnown RBP0.49□□□□□ -2.33
TOP2B-205ENST00000470132 DNAH1Q9P2D7 4330 aa0.49□□□□□ -2.33
TOP2B-205ENST00000470132 DCHS2Q6V1P9 2916 aa0.49□□□□□ -2.33
TOP2B-205ENST00000470132 COL6A3P12111 3177 aa0.49□□□□□ -2.33
TOP2B-205ENST00000470132 SONP18583 2426 aaKnown RBP0.48□□□□□ -2.33
TOP2B-205ENST00000470132 LEAP2Q969E1 77 aa0.48□□□□□ -2.33
TOP2B-205ENST00000470132 TOMM7Q9P0U1 55 aa0.48□□□□□ -2.33
TOP2B-205ENST00000470132 LRRK2Q5S007 2527 aa0.48□□□□□ -2.33
TOP2B-205ENST00000470132 UTP20O75691 2785 aaKnown RBP0.48□□□□□ -2.33
TOP2B-205ENST00000470132 HIVEP1P15822 2718 aa0.48□□□□□ -2.33
TOP2B-205ENST00000470132 CHD7Q9P2D1 2997 aa0.48□□□□□ -2.33
TOP2B-205ENST00000470132 HMCN2Q8NDA2 5059 aa0.47□□□□□ -2.33
TOP2B-205ENST00000470132 AKAP9Q99996 3911 aa0.47□□□□□ -2.33
TOP2B-205ENST00000470132 KRTAP6-2Q3LI66 62 aa0.47□□□□□ -2.33
TOP2B-205ENST00000470132 CRYBG3Q68DQ2 2970 aa0.47□□□□□ -2.33
TOP2B-205ENST00000470132 NBPF19A0A087WUL8 3843 aa0.47□□□□□ -2.33
TOP2B-205ENST00000470132 USP9YO00507 2555 aaPredicted RBP0.46□□□□□ -2.34
TOP2B-205ENST00000470132 SPENQ96T58 3664 aaKnown RBP0.45□□□□□ -2.34
TOP2B-205ENST00000470132 ZANQ9Y493 2812 aa0.45□□□□□ -2.34
TOP2B-205ENST00000470132 NBEAL2Q6ZNJ1 2754 aa0.45□□□□□ -2.34
TOP2B-205ENST00000470132 TENM2Q9NT68 2774 aa0.45□□□□□ -2.34
TOP2B-205ENST00000470132 MT1AP04731 61 aa0.45□□□□□ -2.34
TOP2B-205ENST00000470132 MAST4O15021 2626 aa0.45□□□□□ -2.34
TOP2B-205ENST00000470132 TEP1Q99973 2627 aaKnown RBP0.45□□□□□ -2.34
TOP2B-205ENST00000470132 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
TOP2B-205ENST00000470132 KRTAP8-1Q8IUC2 63 aa0.44□□□□□ -2.34
TOP2B-205ENST00000470132 KALRNO60229 2985 aa0.44□□□□□ -2.34
TOP2B-205ENST00000470132 MUC5BQ9HC84 5762 aaPredicted RBP0.43□□□□□ -2.34
TOP2B-205ENST00000470132 FAM186AA6NE01 2351 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms