RNA–Protein interactions for RNA: ENST00000469381.1

GSE1-207, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 5,885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-207ENST00000469381 COL6A3P12111 3177 aa6.33□□□□□ -1.4
GSE1-207ENST00000469381 FREM2Q5SZK8 3169 aa6.33□□□□□ -1.4
GSE1-207ENST00000469381 ATMQ13315 3056 aa6.33□□□□□ -1.4
GSE1-207ENST00000469381 P0C880 135 aa6.32□□□□□ -1.4
GSE1-207ENST00000469381 HIVEP1P15822 2718 aa6.3□□□□□ -1.4
GSE1-207ENST00000469381 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
GSE1-207ENST00000469381 KRTAP1-4P0C5Y4 121 aa6.3□□□□□ -1.4
GSE1-207ENST00000469381 STAB2Q8WWQ8 2551 aa6.29□□□□□ -1.4
GSE1-207ENST00000469381 UTP20O75691 2785 aaKnown RBP6.29□□□□□ -1.4
GSE1-207ENST00000469381 A0A1B0GVY2 172 aa6.26□□□□□ -1.41
GSE1-207ENST00000469381 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
GSE1-207ENST00000469381 TACC2O95359 2948 aa6.25□□□□□ -1.41
GSE1-207ENST00000469381 SPEGQ15772 3267 aa6.25□□□□□ -1.41
GSE1-207ENST00000469381 NBEAQ8NFP9 2946 aa6.25□□□□□ -1.41
GSE1-207ENST00000469381 SPTBN5Q9NRC6 3674 aaKnown RBP6.25□□□□□ -1.41
GSE1-207ENST00000469381 COL12A1Q99715 3063 aa6.25□□□□□ -1.41
GSE1-207ENST00000469381 BOD1L1Q8NFC6 3051 aa6.24□□□□□ -1.41
GSE1-207ENST00000469381 ADGRG4Q8IZF6 3080 aa6.24□□□□□ -1.41
GSE1-207ENST00000469381 FLNCQ14315 2725 aa6.24□□□□□ -1.41
GSE1-207ENST00000469381 XP32Q5T750 250 aa6.24□□□□□ -1.41
GSE1-207ENST00000469381 APCP25054 2843 aa6.24□□□□□ -1.41
GSE1-207ENST00000469381 EYSQ5T1H1 3165 aa6.22□□□□□ -1.41
GSE1-207ENST00000469381 REV3LO60673 3130 aa6.22□□□□□ -1.41
GSE1-207ENST00000469381 FRYLO94915 3013 aa6.2□□□□□ -1.42
GSE1-207ENST00000469381 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
GSE1-207ENST00000469381 DMXL2Q8TDJ6 3036 aa6.19□□□□□ -1.42
GSE1-207ENST00000469381 PP632Q6XCG6 107 aa6.15□□□□□ -1.43
GSE1-207ENST00000469381 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
GSE1-207ENST00000469381 ASH1LQ9NR48 2969 aaKnown RBP6.14□□□□□ -1.43
GSE1-207ENST00000469381 TENM4Q6N022 2769 aa6.13□□□□□ -1.43
GSE1-207ENST00000469381 CFAP47Q6ZTR5 3102 aa6.12□□□□□ -1.43
GSE1-207ENST00000469381 H0YAA0 97 aa6.12□□□□□ -1.43
GSE1-207ENST00000469381 USP34Q70CQ2 3546 aa6.11□□□□□ -1.43
GSE1-207ENST00000469381 ZZEF1O43149 2961 aa6.09□□□□□ -1.43
GSE1-207ENST00000469381 CRYBG3Q68DQ2 2970 aa6.09□□□□□ -1.43
GSE1-207ENST00000469381 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
GSE1-207ENST00000469381 HRNRQ86YZ3 2850 aaPredicted RBP6.06□□□□□ -1.44
GSE1-207ENST00000469381 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.44
GSE1-207ENST00000469381 CELSR2Q9HCU4 2923 aa6.03□□□□□ -1.44
GSE1-207ENST00000469381 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
GSE1-207ENST00000469381 MYO15AQ9UKN7 3530 aa6.02□□□□□ -1.45
GSE1-207ENST00000469381 DCHS2Q6V1P9 2916 aa5.98□□□□□ -1.45
GSE1-207ENST00000469381 DMXL1Q9Y485 3027 aa5.97□□□□□ -1.45
GSE1-207ENST00000469381 PDZD2O15018 2839 aa5.97□□□□□ -1.45
GSE1-207ENST00000469381 ZANQ9Y493 2812 aa5.97□□□□□ -1.45
GSE1-207ENST00000469381 LOC400499M0QZD8 3231 aa5.91□□□□□ -1.46
GSE1-207ENST00000469381 ANK3Q12955 4377 aaKnown RBP5.87□□□□□ -1.47
GSE1-207ENST00000469381 FBN2P35556 2912 aa5.87□□□□□ -1.47
GSE1-207ENST00000469381 ALMS1Q8TCU4 4167 aa5.82□□□□□ -1.48
GSE1-207ENST00000469381 NF1P21359 2839 aa5.8□□□□□ -1.48
GSE1-207ENST00000469381 MUC3AQ02505 3323 aa5.8□□□□□ -1.48
GSE1-207ENST00000469381 TENM2Q9NT68 2774 aa5.77□□□□□ -1.49
GSE1-207ENST00000469381 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
GSE1-207ENST00000469381 CELSR1Q9NYQ6 3014 aa5.76□□□□□ -1.49
GSE1-207ENST00000469381 WDFY3Q8IZQ1 3526 aa5.75□□□□□ -1.49
GSE1-207ENST00000469381 TENM1Q9UKZ4 2725 aa5.73□□□□□ -1.49
GSE1-207ENST00000469381 OTOGQ6ZRI0 2925 aa5.72□□□□□ -1.49
GSE1-207ENST00000469381 TGP01266 2768 aa5.71□□□□□ -1.5
GSE1-207ENST00000469381 RELNP78509 3460 aa5.7□□□□□ -1.5
GSE1-207ENST00000469381 ASPMQ8IZT6 3477 aa5.7□□□□□ -1.5
GSE1-207ENST00000469381 MXRA5Q9NR99 2828 aa5.7□□□□□ -1.5
GSE1-207ENST00000469381 DCHS1Q96JQ0 3298 aa5.7□□□□□ -1.5
GSE1-207ENST00000469381 TENM3Q9P273 2699 aa5.68□□□□□ -1.5
GSE1-207ENST00000469381 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
GSE1-207ENST00000469381 KRTAP12-1P59990 96 aa5.65□□□□□ -1.51
GSE1-207ENST00000469381 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
GSE1-207ENST00000469381 DMDP11532 3685 aa5.63□□□□□ -1.51
GSE1-207ENST00000469381 ZFHX4Q86UP3 3567 aa5.62□□□□□ -1.51
GSE1-207ENST00000469381 NBPF19A0A087WUL8 3843 aa5.6□□□□□ -1.51
GSE1-207ENST00000469381 LAMA5O15230 3695 aa5.55□□□□□ -1.52
GSE1-207ENST00000469381 CSMD1Q96PZ7 3565 aa5.54□□□□□ -1.52
GSE1-207ENST00000469381 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
GSE1-207ENST00000469381 HUWE1Q7Z6Z7 4374 aaKnown RBP5.5□□□□□ -1.53
GSE1-207ENST00000469381 KRTAP10-6P60371 365 aaPredicted RBP5.49□□□□□ -1.53
GSE1-207ENST00000469381 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
GSE1-207ENST00000469381 PKD1L1Q8TDX9 2849 aa5.47□□□□□ -1.53
GSE1-207ENST00000469381 KRTAP10-4P60372 401 aaPredicted RBP5.46□□□□□ -1.53
GSE1-207ENST00000469381 SMG1Q96Q15 3661 aaKnown RBP5.46□□□□□ -1.53
GSE1-207ENST00000469381 FBN1P35555 2871 aaKnown RBP5.43□□□□□ -1.54
GSE1-207ENST00000469381 VWFP04275 2813 aa5.43□□□□□ -1.54
GSE1-207ENST00000469381 FBN3Q75N90 2809 aa5.41□□□□□ -1.54
GSE1-207ENST00000469381 KRTAP4-5Q9BYR2 181 aa5.35□□□□□ -1.55
GSE1-207ENST00000469381 BSNQ9UPA5 3926 aa5.35□□□□□ -1.55
GSE1-207ENST00000469381 INE1O15225 51 aa5.35□□□□□ -1.55
GSE1-207ENST00000469381 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
GSE1-207ENST00000469381 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
GSE1-207ENST00000469381 SVEP1Q4LDE5 3571 aa5.31□□□□□ -1.56
GSE1-207ENST00000469381 KRTAP3-2Q9BYR7 98 aa5.31□□□□□ -1.56
GSE1-207ENST00000469381 DNAH9Q9NYC9 4486 aa5.3□□□□□ -1.56
GSE1-207ENST00000469381 AKAP9Q99996 3911 aa5.29□□□□□ -1.56
GSE1-207ENST00000469381 ZFHX3Q15911 3703 aa5.29□□□□□ -1.56
GSE1-207ENST00000469381 DNAH1Q9P2D7 4330 aa5.28□□□□□ -1.56
GSE1-207ENST00000469381 SPENQ96T58 3664 aaKnown RBP5.26□□□□□ -1.57
GSE1-207ENST00000469381 TRRAPQ9Y4A5 3859 aa5.25□□□□□ -1.57
GSE1-207ENST00000469381 CSMD2Q7Z408 3487 aa5.21□□□□□ -1.57
GSE1-207ENST00000469381 MEGF8Q7Z7M0 2845 aa5.19□□□□□ -1.58
GSE1-207ENST00000469381 DNAH10Q8IVF4 4471 aa5.19□□□□□ -1.58
GSE1-207ENST00000469381 CUBNO60494 3623 aa5.18□□□□□ -1.58
GSE1-207ENST00000469381 DNAH11Q96DT5 4516 aa5.18□□□□□ -1.58
GSE1-207ENST00000469381 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms